MGE detailed information
MGE type: Conjugative plasmid MGE length: 88023 bp
Accession: NZ_CP015161 Location: 1..88023 Organism: Escherichia coli strain Eco889 Replicon: plasmid pECO-93a
Accession: NZ_CP015161 Location: 1..88023 Organism: Escherichia coli strain Eco889 Replicon: plasmid pECO-93a
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WM90_RS26210 () | 3030..3377 | + | 348 | WP_064847756.1 | hypothetical protein | - |
| WM90_RS26215 () | 3374..4066 | + | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| WM90_RS26220 () | 4077..5060 | + | 984 | WP_001191879.1 | hypothetical protein | VF |
| WM90_RS26225 () | 5063..6352 | + | 1290 | WP_001271991.1 | conjugal transfer protein TraO | - |
| WM90_RS26230 () | 6352..7056 | + | 705 | WP_042012199.1 | IncI1-type conjugal transfer protein TraP | - |
| WM90_RS26235 () | 7056..7583 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| WM90_RS26240 () | 7634..8038 | + | 405 | WP_021547639.1 | IncI1-type conjugal transfer protein TraR | - |
| WM90_RS26245 () | 8102..8290 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| WM90_RS26250 () | 8274..9074 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| WM90_RS26255 () | 9164..12208 | + | 3045 | WP_064847757.1 | IncI1-type conjugal transfer protein TraU | - |
| WM90_RS26260 () | 12208..12822 | + | 615 | WP_064847758.1 | IncI1-type conjugal transfer protein TraV | - |
| WM90_RS26265 () | 12789..13991 | + | 1203 | WP_001189160.1 | IncI1-type conjugal transfer protein TraW | - |
| WM90_RS26270 () | 14020..14604 | + | 585 | WP_064847759.1 | conjugal transfer protein TraX | - |
| WM90_RS26275 () | 14701..16869 | + | 2169 | WP_064847760.1 | DotA/TraY family protein | - |
| WM90_RS26280 () | 16934..17596 | + | 663 | WP_064847761.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| WM90_RS26285 () | 17694..17903 | + | 210 | WP_001140543.1 | hemolysin expression modulator Hha | - |
| WM90_RS26295 () | 18147..18809 | + | 663 | WP_042078443.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| WM90_RS26300 () | 18881..19090 | - | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| WM90_RS30730 () | 19422..19598 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| WM90_RS26310 () | 19663..19959 | - | 297 | WP_001275298.1 | hypothetical protein | - |
| WM90_RS26315 () | 20259..20510 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| WM90_RS26320 () | 20582..20734 | - | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| - () | 20789..20846 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 20789..20846 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 20789..20846 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 20789..20846 | + | 58 | NuclAT_0 | - | Antitoxin Detail |
| WM90_RS26325 () | 21026..22234 | + | 1209 | WP_064847762.1 | IncI1-type conjugal transfer protein TrbA | - |
| WM90_RS26330 () | 22253..23323 | + | 1071 | WP_064847763.1 | IncI1-type conjugal transfer protein TrbB | - |
| WM90_RS26335 () | 23316..25607 | + | 2292 | WP_077883636.1 | conjugal transfer protein TrbC | - |
| WM90_RS26340 () | 25644..28343 | - | 2700 | WP_064847764.1 | Protein TraI | Relaxase |
| WM90_RS26345 () | 28354..28686 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| WM90_RS26350 () | 28920..29255 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| WM90_RS26355 () | 29341..30189 | - | 849 | WP_064847765.1 | DUF4942 domain-containing protein | - |
| WM90_RS28830 () | 30538..30735 | + | 198 | WP_071961330.1 | hypothetical protein | - |
| WM90_RS26360 () | 30769..31020 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| WM90_RS26365 () | 31051..31284 | - | 234 | WP_077883637.1 | hypothetical protein | - |
| WM90_RS26370 () | 31284..32210 | - | 927 | WP_064847767.1 | Recombination-promoting nuclease RpnA | VF |
| WM90_RS26375 () | 32275..32541 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| WM90_RS26380 () | 32635..33069 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| WM90_RS26385 () | 33798..34298 | - | 501 | WP_000117624.1 | antirestriction protein ArdA | - |
| WM90_RS26395 () | 34761..35357 | - | 597 | WP_000978012.1 | hypothetical protein | - |
| WM90_RS26400 () | 35354..36073 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| WM90_RS26405 () | 36070..36504 | - | 435 | WP_000845898.1 | conjugation system SOS inhibitor PsiB | - |
| WM90_RS26410 () | 36559..38517 | - | 1959 | WP_064847768.1 | ParB/RepB/Spo0J family partition protein | - |
| WM90_RS26415 () | 38579..38812 | - | 234 | WP_001042947.1 | DUF905 domain-containing protein | - |
| WM90_RS26420 () | 38869..39396 | - | 528 | WP_001276121.1 | single-stranded DNA-binding protein | - |
| WM90_RS29650 () | 39780..40094 | - | 315 | WP_001434357.1 | hypothetical protein | - |
| WM90_RS26430 () | 40165..40356 | - | 192 | WP_001027495.1 | hypothetical protein | - |
| WM90_RS26435 () | 40353..40775 | - | 423 | WP_064847769.1 | DUF1380 family protein | - |
| WM90_RS26440 () | 40822..41124 | - | 303 | WP_072248692.1 | antirestriction protein | - |
| WM90_RS30735 () | 41659..42435 | - | 777 | WP_064847770.1 | hypothetical protein | - |
| WM90_RS26450 () | 42481..42915 | - | 435 | WP_064847771.1 | DUF1380 family protein | - |
| WM90_RS26455 () | 42929..43150 | - | 222 | WP_001104879.1 | hypothetical protein | - |
| WM90_RS26460 () | 43151..43834 | - | 684 | WP_001401756.1 | DNA methylase | - |
| WM90_RS29655 () | 43910..44221 | - | 312 | WP_014640311.1 | hypothetical protein | - |
| WM90_RS26470 () | 44218..45120 | - | 903 | WP_137489562.1 | DUF1281 domain-containing protein | - |
| WM90_RS26475 () | 45538..45786 | + | 249 | WP_000618111.1 | DinI-like family protein | - |
| WM90_RS26480 () | 45783..46220 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| WM90_RS26485 () | 46220..47494 | + | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| WM90_RS26490 () | 47496..47912 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| WM90_RS26495 () | 47905..48885 | - | 981 | WP_064847773.1 | plasmid segregation protein ParM | - |
| WM90_RS26500 () | 49299..49607 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| WM90_RS26505 () | 49694..50338 | - | 645 | WP_001144036.1 | ParA family protein | - |
| WM90_RS26510 () | 50518..51297 | - | 780 | WP_064847774.1 | site-specific integrase | - |
| WM90_RS26515 () | 51299..51712 | - | 414 | WP_000465036.1 | hypothetical protein | - |
| WM90_RS26520 () | 52280..52537 | + | 258 | WP_001542562.1 | hypothetical protein | - |
| WM90_RS26525 () | 52537..53127 | + | 591 | WP_064847775.1 | hypothetical protein | - |
| WM90_RS26530 () | 54148..55257 | + | 1110 | WP_000737315.1 | porin OmpC | - |
| WM90_RS26535 () | 55421..56185 | - | 765 | WP_064847776.1 | helix-turn-helix domain-containing protein | - |
| WM90_RS26545 () | 57190..57792 | + | 603 | WP_064847778.1 | proQ/FINO family protein | - |
| WM90_RS26550 () | 57848..58348 | + | 501 | WP_024230392.1 | hypothetical protein | - |
| WM90_RS30740 () | 58353..58619 | + | 267 | WP_021576094.1 | hypothetical protein | - |
| WM90_RS26560 () | 58811..59092 | - | 282 | WP_064847779.1 | hypothetical protein | - |
| WM90_RS26565 () | 59198..59473 | - | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| WM90_RS26570 () | 59473..59757 | - | 285 | WP_024186511.1 | ribbon-helix-helix domain-containing protein | - |
| WM90_RS26575 () | 60662..61534 | - | 873 | WP_064772923.1 | incFII family plasmid replication initiator RepA | - |
| WM90_RS26585 () | 62511..62774 | + | 264 | WP_001387472.1 | ash family protein | - |
| WM90_RS26590 () | 62692..62979 | + | 288 | WP_033548823.1 | conjugal transfer protein TraA | - |
| WM90_RS26595 () | 63421..63954 | + | 534 | WP_033548834.1 | transcription termination factor NusG | - |
| WM90_RS26600 () | 64208..64891 | + | 684 | WP_033548824.1 | conjugal transfer protein TraC | - |
| WM90_RS26605 () | 64905..65471 | + | 567 | WP_033548825.1 | hypothetical protein | - |
| WM90_RS26610 () | 65739..65993 | + | 255 | WP_033548826.1 | PilI type IV pilus biogenesis protein | - |
| WM90_RS26615 () | 66036..66283 | + | 248 | Protein_79 | hypothetical protein | - |
| WM90_RS26620 () | 66957..68024 | + | 1068 | WP_033548827.1 | hypothetical protein | VF |
| WM90_RS26625 () | 68024..68461 | + | 438 | WP_000539811.1 | hypothetical protein | VF |
| WM90_RS26630 () | 68475..70157 | + | 1683 | WP_033548828.1 | Outer membrane lipoprotein BfpB | VF |
| WM90_RS26635 () | 70150..71445 | + | 1296 | WP_001545757.1 | type 4b pilus protein PilO2 | - |
| WM90_RS26640 () | 71432..71884 | + | 453 | WP_033548829.1 | hypothetical protein | VF |
| WM90_RS26645 () | 71895..73448 | + | 1554 | WP_001545756.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| WM90_RS26650 () | 73461..74546 | + | 1086 | WP_064847780.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| WM90_RS26655 () | 74563..75177 | + | 615 | WP_042012072.1 | hypothetical protein | VF |
| WM90_RS26660 () | 75187..75747 | + | 561 | WP_000014005.1 | hypothetical protein | VF |
| WM90_RS26665 () | 75732..76388 | + | 657 | WP_001193551.1 | hypothetical protein | VF |
| WM90_RS26670 () | 76388..77817 | + | 1430 | Protein_90 | hypothetical protein | VF |
| WM90_RS30745 () | 77814..78011 | - | 198 | WP_032159596.1 | hypothetical protein | - |
| WM90_RS26685 () | 79451..80605 | + | 1155 | WP_001139955.1 | integrase | - |
| WM90_RS26690 () | 80756..81580 | + | 825 | WP_001238933.1 | hypothetical protein | - |
| WM90_RS26695 () | 81666..82868 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| WM90_RS26700 () | 82928..83512 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| WM90_RS26705 () | 83907..84365 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| WM90_RS26710 () | 84362..85180 | + | 819 | WP_064847781.1 | hypothetical protein | VF |
| WM90_RS26715 () | 85177..86325 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| WM90_RS28945 () | 86322..86612 | + | 291 | WP_001314267.1 | hypothetical protein | - |
| WM90_RS26720 () | 86627..87178 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|