MGE detailed information
MGE type: Prophage MGE length: 40828 bp
Accession: NZ_CP015023 Location: 5465748..5506575 Organism: Escherichia coli strain SRCC 1675 Replicon: chromosome
Accession: NZ_CP015023 Location: 5465748..5506575 Organism: Escherichia coli strain SRCC 1675 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AR439_RS33665 () | 5461737..5461784 | + | 48 | WP_211180494.1 | protein YnaN | - |
| AR439_RS28460 () | 5461798..5462781 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| AR439_RS33495 () | 5463056..5463226 | + | 171 | WP_001625136.1 | hypothetical protein | - |
| AR439_RS28470 () | 5463259..5464632 | + | 1374 | WP_000123746.1 | ATP-dependent RNA helicase DbpA | - |
| AR439_RS28475 () | 5464761..5465696 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| AR439_RS31235 () | 5465748..5466983 | - | 1236 | WP_000040839.1 | Putative defective protein IntQ ; Integrase | Integrase |
| AR439_RS28485 () | 5466985..5467200 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| AR439_RS28490 () | 5467300..5467488 | - | 189 | WP_001302840.1 | DUF1187 family protein | - |
| - () | 5467304..5467482 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 5467304..5467482 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 5467304..5467482 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 5467304..5467482 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| AR439_RS28495 () | 5467526..5467675 | - | 150 | WP_001443846.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| AR439_RS28500 () | 5467731..5468540 | - | 810 | WP_000166313.1 | recombination protein RecT | - |
| AR439_RS28505 () | 5468533..5471133 | - | 2601 | WP_000105140.1 | exodeoxyribonuclease VIII | - |
| AR439_RS28510 () | 5471235..5471510 | - | 276 | WP_001344816.1 | hypothetical protein | - |
| AR439_RS28515 () | 5471585..5471755 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| AR439_RS28520 () | 5471755..5471976 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| AR439_RS28525 () | 5472418..5472906 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| AR439_RS28530 () | 5472903..5473058 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| AR439_RS32265 () | 5473069..5473248 | - | 180 | WP_001326317.1 | hypothetical protein | - |
| AR439_RS28535 () | 5473491..5473910 | - | 420 | WP_000233319.1 | helix-turn-helix domain-containing protein | - |
| AR439_RS28540 () | 5473990..5474244 | + | 255 | WP_001072342.1 | hypothetical protein | - |
| AR439_RS28545 () | 5474241..5474663 | + | 423 | WP_000693803.1 | hypothetical protein | - |
| AR439_RS28550 () | 5474741..5475529 | + | 789 | WP_001304174.1 | hypothetical protein | - |
| AR439_RS28555 () | 5475536..5476282 | + | 747 | WP_000788980.1 | ATP-binding protein | - |
| AR439_RS28560 () | 5476305..5477066 | + | 762 | WP_000450712.1 | DUF1627 domain-containing protein | - |
| AR439_RS28565 () | 5477082..5477504 | + | 423 | WP_001141110.1 | DUF977 family protein | - |
| AR439_RS28570 () | 5477610..5477822 | + | 213 | WP_000935420.1 | hypothetical protein | - |
| AR439_RS28575 () | 5477855..5478072 | + | 218 | Protein_5310 | DUF4014 family protein | - |
| AR439_RS28580 () | 5478074..5478337 | + | 264 | WP_000224233.1 | hypothetical protein | - |
| AR439_RS28585 () | 5478348..5478509 | + | 162 | WP_000208018.1 | hypothetical protein | - |
| AR439_RS28590 () | 5478588..5478833 | + | 246 | WP_000365100.1 | hypothetical protein | - |
| AR439_RS28595 () | 5479265..5480416 | + | 1152 | WP_001100703.1 | DNA cytosine methyltransferase | - |
| AR439_RS28600 () | 5480384..5481373 | - | 990 | WP_000016656.1 | hypothetical protein | - |
| AR439_RS28605 () | 5481373..5482764 | - | 1392 | WP_000138556.1 | ATP-binding protein | - |
| AR439_RS28610 () | 5483264..5483863 | + | 600 | WP_000940319.1 | DUF1367 family protein | - |
| AR439_RS28615 () | 5483863..5484153 | + | 291 | WP_000247761.1 | DUF1364 domain-containing protein | - |
| AR439_RS28620 () | 5484150..5484704 | + | 555 | WP_000640158.1 | DUF1133 family protein | - |
| AR439_RS28635 () | 5485266..5485697 | + | 432 | WP_000466957.1 | tellurite resistance TerB family protein | - |
| AR439_RS28640 () | 5485694..5485949 | + | 256 | Protein_5321 | DUF3927 family protein | - |
| AR439_RS28645 () | 5486272..5488125 | + | 1854 | WP_000143079.1 | SASA family carbohydrate esterase | - |
| AR439_RS28650 () | 5488275..5488490 | + | 216 | WP_000284522.1 | class II holin family protein | - |
| AR439_RS28655 () | 5488495..5488839 | + | 345 | WP_000731221.1 | YdfR family protein | - |
| AR439_RS28660 () | 5488890..5489423 | + | 534 | WP_000992137.1 | lysozyme | - |
| AR439_RS28665 () | 5489694..5490263 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| AR439_RS33290 () | 5490263..5490409 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| AR439_RS33300 () | 5490637..5490822 | + | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| AR439_RS28680 () | 5491247..5491474 | - | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| AR439_RS31265 () | 5491516..5491881 | + | 366 | WP_000279786.1 | HNH endonuclease | - |
| AR439_RS28690 () | 5492171..5492734 | + | 564 | WP_000958416.1 | terminase small subunit | - |
| AR439_RS28695 () | 5492731..5494392 | + | 1662 | WP_001301491.1 | terminase large subunit | - |
| AR439_RS28700 () | 5494456..5496393 | + | 1938 | WP_000173030.1 | phage major capsid protein | - |
| AR439_RS28705 () | 5496438..5496659 | + | 222 | WP_001063094.1 | hypothetical protein | - |
| AR439_RS31275 () | 5496605..5499189 | + | 2585 | Protein_5335 | phage portal protein | - |
| AR439_RS28720 () | 5499186..5499512 | + | 327 | WP_000125984.1 | head-tail connector protein | - |
| AR439_RS28725 () | 5499522..5499873 | + | 352 | Protein_5337 | phage head closure protein | - |
| AR439_RS28730 () | 5499870..5500316 | + | 447 | WP_000573391.1 | HK97 gp10 family phage protein | - |
| AR439_RS28735 () | 5500313..5500656 | + | 344 | Protein_5339 | DUF3168 domain-containing protein | - |
| AR439_RS28740 () | 5500725..5501404 | + | 680 | Protein_5340 | immunoglobulin domain-containing protein | - |
| AR439_RS28745 () | 5501439..5501810 | + | 372 | Protein_5341 | phage tail assembly chaperone | - |
| AR439_RS28750 () | 5501906..5502115 | + | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| AR439_RS33670 () | 5502167..5502484 | + | 318 | WP_077879947.1 | phage tail tape measure protein | - |
| AR439_RS33675 () | 5502510..5502647 | + | 138 | WP_213053435.1 | hypothetical protein | - |
| AR439_RS33505 () | 5502683..5503717 | + | 1035 | WP_187642855.1 | tape measure protein | - |
| AR439_RS33315 () | 5503681..5503845 | + | 165 | WP_187642854.1 | hypothetical protein | - |
| AR439_RS33680 () | 5503788..5504015 | + | 228 | Protein_5347 | phage tail tape measure protein | - |
| AR439_RS33320 () | 5503995..5505248 | + | 1254 | Protein_5348 | phage tail tape measure protein | - |
| AR439_RS28760 () | 5505241..5505582 | + | 342 | WP_000807950.1 | phage tail protein | - |
| AR439_RS28765 () | 5505582..5505986 | + | 405 | Protein_5350 | phage minor tail protein L | - |
| AR439_RS28770 () | 5506042..5506575 | + | 534 | WP_000992137.1 | lysozyme | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA10219 | NC_002695 | 1921609..1970151 | 0.008 |