MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 95170 bp
Accession: NZ_CP015022 Location: 1..95170 Organism: Escherichia coli strain SRCC 1675 Replicon: plasmid pSRCC 1675
Accession: NZ_CP015022 Location: 1..95170 Organism: Escherichia coli strain SRCC 1675 Replicon: plasmid pSRCC 1675
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AR439_RS00010 () | 247..1149 | + | 903 | WP_000273919.1 | DUF1281 domain-containing protein | - |
| AR439_RS31280 () | 1153..1458 | + | 306 | WP_010891292.1 | hypothetical protein | - |
| AR439_RS00020 () | 1535..2218 | + | 684 | WP_000085945.1 | DNA methylase | - |
| AR439_RS00025 () | 2219..2440 | + | 222 | WP_001104869.1 | hypothetical protein | - |
| AR439_RS00030 () | 2334..2888 | + | 555 | WP_001358893.1 | DUF1380 family protein | - |
| AR439_RS33325 () | 2934..3710 | + | 777 | WP_001005037.1 | hypothetical protein | - |
| AR439_RS00040 () | 4251..4553 | + | 303 | WP_010891293.1 | antirestriction protein | - |
| AR439_RS00045 () | 4600..5022 | + | 423 | WP_000271685.1 | DUF1380 family protein | - |
| AR439_RS00050 () | 5019..5210 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| AR439_RS33330 () | 5180..5689 | - | 510 | WP_032245379.1 | hypothetical protein | - |
| AR439_RS00060 () | 6206..6436 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| AR439_RS00065 () | 6488..7849 | + | 1362 | WP_000199442.1 | DUF3560 domain-containing protein | - |
| AR439_RS00070 () | 7896..8459 | + | 564 | WP_001302171.1 | class I SAM-dependent methyltransferase | - |
| AR439_RS00075 () | 8545..9000 | - | 456 | WP_001358896.1 | hypothetical protein | - |
| AR439_RS00080 () | 9070..9276 | + | 207 | WP_000547965.1 | hypothetical protein | - |
| AR439_RS00085 () | 9302..9754 | + | 453 | WP_000290823.1 | single-stranded DNA-binding protein | - |
| AR439_RS00090 () | 9811..10044 | + | 234 | WP_000005995.1 | DUF905 family protein | - |
| AR439_RS00095 () | 10110..12068 | + | 1959 | WP_000117168.1 | ParB/RepB/Spo0J family partition protein | - |
| AR439_RS00100 () | 12123..12557 | + | 435 | WP_000845908.1 | conjugation system SOS inhibitor PsiB | - |
| AR439_RS00105 () | 12554..13315 | + | 762 | WP_001276250.1 | plasmid SOS inhibition protein A | - |
| - () | 13284..13482 | + | 199 | NuclAT_0 | - | - |
| - () | 13284..13482 | + | 199 | NuclAT_0 | - | - |
| - () | 13284..13482 | + | 199 | NuclAT_0 | - | - |
| - () | 13284..13482 | + | 199 | NuclAT_0 | - | - |
| AR439_RS00115 () | 13547..13705 | + | 159 | WP_001302184.1 | type I toxin-antitoxin system Hok family toxin | - |
| AR439_RS00120 () | 13839..15860 | + | 2022 | Protein_22 | hypothetical protein | Relaxase |
| AR439_RS00125 () | 15928..16359 | + | 432 | WP_001453090.1 | hypothetical protein | - |
| AR439_RS32305 () | 17024..17373 | - | 350 | Protein_24 | IS3 family transposase IS3H | Transposase |
| AR439_RS32310 () | 17467..17730 | + | 264 | Protein_25 | IS21 family transposase ISEc62 | Transposase |
| AR439_RS32315 () | 17770..17890 | + | 121 | Protein_26 | IS21 family transposase ISEc62 | Transposase |
| AR439_RS28865 () | 17887..18039 | + | 153 | Protein_27 | IS1 family transposase | - |
| AR439_RS00140 () | 18146..27655 | + | 9510 | WP_000581721.1 | Toxin B | VF |
| AR439_RS00145 () | 27729..27953 | + | 225 | Protein_29 | IS3 family transposase IS3H | Transposase |
| AR439_RS32320 () | 28021..28191 | - | 171 | Protein_30 | IS3 family transposase IS1203 | Transposase |
| AR439_RS32325 () | 28198..28449 | - | 252 | Protein_31 | IS3 family transposase IS1203 | Transposase |
| AR439_RS00155 () | 28506..29894 | + | 1389 | Protein_32 | Multifunctional conjugation protein TraI | Relaxase |
| AR439_RS00160 () | 29914..30660 | + | 747 | WP_000205762.1 | conjugal transfer pilus acetylase TraX | - |
| AR439_RS00165 () | 30719..31579 | + | 861 | WP_000704522.1 | putative protein YcjY | VF |
| AR439_RS00170 () | 31682..32242 | + | 561 | WP_000840472.1 | fertility inhibition protein FinO | - |
| AR439_RS00175 () | 32375..32587 | + | 213 | WP_001302189.1 | ANR family transcriptional regulator | - |
| AR439_RS00180 () | 32832..33293 | + | 462 | WP_001233853.1 | thermonuclease family protein | - |
| AR439_RS00185 () | 33339..33548 | + | 210 | WP_001302200.1 | hemolysin expression modulator Hha | - |
| AR439_RS00190 () | 33586..33924 | + | 339 | WP_000766796.1 | hypothetical protein | - |
| AR439_RS00195 () | 34164..34418 | + | 255 | WP_000083831.1 | replication regulatory protein RepA | - |
| AR439_RS00200 () | 34654..34728 | + | 75 | WP_001370046.1 | RepA leader peptide Tap | - |
| AR439_RS00205 () | 34721..35578 | + | 858 | WP_000130945.1 | incFII family plasmid replication initiator RepA | - |
| AR439_RS00210 () | 36490..36774 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| AR439_RS00215 () | 36774..37049 | + | 276 | WP_000421248.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AR439_RS00220 () | 37144..37350 | + | 207 | WP_001105064.1 | hypothetical protein | - |
| AR439_RS00225 () | 37450..37665 | - | 216 | Protein_46 | transposase | - |
| AR439_RS28895 () | 37709..38275 | - | 567 | Protein_47 | IS3 family transposase ISSd1 | Transposase |
| AR439_RS00235 () | 38275..38691 | - | 417 | Protein_48 | IS91 family transposase | - |
| AR439_RS00240 () | 38691..38876 | - | 186 | WP_001302179.1 | hypothetical protein | - |
| AR439_RS00245 () | 39053..41263 | + | 2211 | WP_000592771.1 | Catalase-peroxidase | VF |
| AR439_RS00250 () | 41307..41696 | + | 390 | WP_001172748.1 | cytochrome b562 family protein | - |
| AR439_RS00255 () | 41753..42741 | + | 989 | Protein_52 | IS3 family transposase IS629 | Transposase |
| AR439_RS00260 () | 42922..46824 | + | 3903 | WP_001034100.1 | Serine protease EspP | VF |
| AR439_RS32335 () | 47080..47295 | - | 216 | Protein_54 | IS1 family transposase | - |
| AR439_RS00285 () | 48623..48874 | - | 252 | Protein_56 | IS1 family transposase IS1N | Transposase |
| AR439_RS00295 () | 50316..51137 | + | 822 | WP_001302199.1 | polysaccharide deacetylase family protein | - |
| AR439_RS00300 () | 51137..52243 | + | 1107 | WP_000975743.1 | glycosyltransferase family 4 protein | - |
| AR439_RS00305 () | 52333..54054 | + | 1722 | WP_000550559.1 | phosphoethanolamine transferase CptA | - |
| AR439_RS00310 () | 54128..55126 | + | 999 | WP_001302181.1 | Lipid A biosynthesis myristoyltransferase | VF |
| AR439_RS32345 () | 55179..55367 | + | 189 | Protein_61 | hypothetical protein | - |
| AR439_RS00320 () | 55471..55557 | - | 87 | Protein_62 | IS3 family transposase ISEhe3 | Transposase |
| AR439_RS00325 () | 56017..58713 | + | 2697 | WP_001358886.1 | Metalloprotease StcE | VF |
| AR439_RS00330 () | 58800..59675 | + | 876 | WP_001302175.1 | Type II secretion system protein C | VF |
| AR439_RS00335 () | 59676..61643 | + | 1968 | WP_001302177.1 | Type II secretion system protein D | VF |
| AR439_RS00340 () | 61643..63148 | + | 1506 | WP_000092338.1 | Type II secretion system protein E | VF |
| AR439_RS00345 () | 63150..64373 | + | 1224 | WP_001173152.1 | Type II secretion system protein F | VF |
| AR439_RS00350 () | 64404..64838 | + | 435 | WP_001231211.1 | Type II secretion system protein G | VF |
| AR439_RS00355 () | 64835..65389 | + | 555 | WP_000082929.1 | Putative type II secretion system protein H | VF |
| AR439_RS00360 () | 65404..65751 | + | 348 | WP_000173396.1 | Type II secretion system protein I | VF |
| AR439_RS00365 () | 65748..66347 | + | 600 | WP_000082782.1 | Type II secretion system protein J | VF |
| AR439_RS00370 () | 66344..67321 | + | 978 | WP_000776550.1 | Putative type II secretion system protein K | VF |
| AR439_RS00375 () | 67360..68532 | + | 1173 | WP_071525076.1 | Type II secretion system protein L | VF |
| AR439_RS00380 () | 68519..69031 | + | 513 | WP_001004187.1 | Type II secretion system protein M | VF |
| AR439_RS00385 () | 69089..69922 | + | 834 | WP_000096786.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| AR439_RS00390 () | 70014..70415 | + | 402 | WP_000971918.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| AR439_RS00400 () | 70594..71765 | + | 1172 | Protein_77 | IS3 family transposase ISLad1 | Transposase |
| AR439_RS00405 () | 72306..72821 | + | 516 | WP_000839950.1 | Hemolysin-activating lysine-acyltransferase HlyC | VF |
| AR439_RS00410 () | 72823..75819 | + | 2997 | WP_000217739.1 | Hemolysin, chromosomal | VF |
| AR439_RS00415 () | 75869..77989 | + | 2121 | WP_000987091.1 | Alpha-hemolysin translocation ATP-binding protein HlyB | VF |
| AR439_RS00420 () | 77993..79432 | + | 1440 | WP_001213545.1 | Hemolysin secretion protein D, chromosomal | VF |
| AR439_RS33335 () | 79553..80045 | + | 493 | Protein_82 | Transcriptional repressor MprA | VF |
| AR439_RS31325 () | 80176..80406 | + | 231 | WP_010891288.1 | hypothetical protein | - |
| AR439_RS00440 () | 80527..81267 | + | 741 | WP_001066920.1 | IS91 family transposase ISMno23 | Transposase |
| AR439_RS00445 () | 81552..82529 | - | 978 | WP_000361615.1 | RepB family plasmid replication initiator protein | - |
| AR439_RS00455 () | 82937..83137 | - | 201 | WP_000708307.1 | hypothetical protein | - |
| AR439_RS00460 () | 83134..83754 | - | 621 | WP_001248529.1 | hypothetical protein | - |
| AR439_RS00465 () | 83751..84434 | - | 684 | WP_010891291.1 | DNA-binding protein | - |
| AR439_RS00475 () | 84893..85111 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AR439_RS00480 () | 85113..85418 | + | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AR439_RS00485 () | 85419..86225 | + | 807 | WP_000016989.1 | site-specific integrase | - |
| AR439_RS00490 () | 86948..88035 | - | 1088 | Protein_92 | IS3 family transposase IS1203 | Transposase |
| AR439_RS28955 () | 89331..89591 | + | 261 | WP_071526583.1 | RepB family plasmid replication initiator protein | - |
| AR439_RS00510 () | 90179..91345 | + | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| AR439_RS00515 () | 91345..92316 | + | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|