MGE detailed information
MGE type: Prophage MGE length: 40172 bp
Accession: NZ_CP014407 Location: 1926255..1966426 Organism: Staphylococcus aureus strain USA300-SUR12 Replicon: chromosome
Accession: NZ_CP014407 Location: 1926255..1966426 Organism: Staphylococcus aureus strain USA300-SUR12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AYM25_RS09790 () | 1922068..1922814 | - | 747 | WP_002868962.1 | S9 family peptidase | - |
| AYM25_RS09795 () | 1922819..1923292 | - | 474 | WP_000672014.1 | nucleoside triphosphatase YtkD | - |
| AYM25_RS09800 () | 1923358..1923615 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| AYM25_RS09805 () | 1923612..1924613 | - | 1002 | WP_000778523.1 | o-succinylbenzoate synthase | - |
| AYM25_RS09810 () | 1924618..1926096 | - | 1479 | WP_000348360.1 | o-succinylbenzoate--CoA ligase | - |
| AYM25_RS09815 () | 1926255..1926710 | - | 456 | WP_011443643.1 | DUF4909 domain-containing protein | - |
| AYM25_RS09820 () | 1927013..1927663 | + | 651 | WP_001795535.1 | excalibur calcium-binding domain-containing protein | - |
| AYM25_RS09825 () | 1927744..1928739 | + | 996 | WP_000070653.1 | DUF4352 domain-containing protein | - |
| AYM25_RS09830 () | 1928815..1929441 | + | 627 | Protein_1845 | hypothetical protein | - |
| AYM25_RS09835 () | 1929482..1929826 | + | 345 | WP_077444006.1 | DUF3969 family protein | - |
| AYM25_RS09840 () | 1929924..1930475 | + | 552 | WP_000414205.1 | hypothetical protein | - |
| AYM25_RS09845 () | 1930693..1931334 | - | 642 | WP_000494956.1 | ImmA/IrrE family metallo-endopeptidase | - |
| AYM25_RS09850 () | 1931448..1931633 | - | 186 | WP_000809857.1 | hypothetical protein | - |
| AYM25_RS09855 () | 1931635..1931811 | - | 177 | WP_000375476.1 | hypothetical protein | - |
| AYM25_RS09860 () | 1931822..1932205 | - | 384 | WP_000070811.1 | hypothetical protein | - |
| AYM25_RS09870 () | 1932809..1932952 | - | 144 | WP_001549059.1 | IS3 family transposase IS655 | Transposase |
| AYM25_RS15410 () | 1933155..1933250 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1933278..1933337 | - | 60 | - | - | Antitoxin Detail |
| AYM25_RS09875 () | 1933373..1933474 | + | 102 | WP_001791893.1 | hypothetical protein | - |
| AYM25_RS09880 () | 1933452..1933628 | - | 177 | Protein_1855 | transposase | - |
| AYM25_RS09885 () | 1933822..1934199 | - | 378 | WP_001037045.1 | DUF1433 domain-containing protein | - |
| AYM25_RS09890 () | 1934720..1938832 | - | 4113 | WP_000831218.1 | ATP-binding protein | - |
| AYM25_RS09895 () | 1939682..1940881 | - | 1200 | WP_000072576.1 | restriction endonuclease subunit S | - |
| AYM25_RS09900 () | 1940874..1942430 | - | 1557 | WP_000028659.1 | type I restriction-modification system subunit M | - |
| AYM25_RS09905 () | 1942594..1942728 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| AYM25_RS09910 () | 1942793..1943512 | - | 720 | WP_001038688.1 | Serine protease SplF | VF |
| AYM25_RS09915 () | 1943663..1944379 | - | 717 | WP_001038759.1 | Serine protease SplE | VF |
| AYM25_RS15415 () | 1944481..1944588 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| AYM25_RS09920 () | 1944537..1945256 | - | 720 | WP_001038704.1 | Serine protease SplD | VF |
| AYM25_RS09925 () | 1945377..1946096 | - | 720 | WP_001038867.1 | Serine protease SplC | VF |
| AYM25_RS09930 () | 1946154..1946876 | - | 723 | WP_001039447.1 | Serine protease SplB | VF |
| AYM25_RS09935 () | 1947001..1947708 | - | 708 | WP_001039435.1 | Serine protease SplA | VF |
| AYM25_RS09945 () | 1948672..1949238 | + | 567 | WP_001092763.1 | DUF4888 domain-containing protein | - |
| AYM25_RS09950 () | 1949712..1950410 | - | 699 | WP_000586140.1 | hypothetical protein | - |
| AYM25_RS09955 () | 1950407..1951168 | - | 762 | WP_000581552.1 | lantibiotic immunity ABC transporter MutE/EpiE family permease subunit | - |
| AYM25_RS09960 () | 1951165..1951857 | - | 693 | WP_001096791.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| AYM25_RS09965 () | 1951880..1953253 | - | 1374 | WP_000691541.1 | S8 family serine peptidase | - |
| AYM25_RS09970 () | 1953263..1953781 | - | 519 | WP_000504439.1 | flavoprotein | - |
| AYM25_RS09975 () | 1953797..1955041 | - | 1245 | WP_000566596.1 | lanthionine synthetase C family protein | - |
| AYM25_RS09980 () | 1955034..1958027 | - | 2994 | WP_001092605.1 | lantibiotic dehydratase | - |
| AYM25_RS09985 () | 1958092..1958235 | - | 144 | WP_000416756.1 | gallidermin/nisin family lantibiotic | - |
| AYM25_RS09995 () | 1958972..1959115 | - | 144 | WP_000416759.1 | gallidermin/nisin family lantibiotic | - |
| AYM25_RS10000 () | 1959357..1960340 | - | 984 | WP_000782464.1 | Leucotoxin LukDv | VF |
| AYM25_RS10005 () | 1960342..1961277 | - | 936 | WP_000473596.1 | Leucotoxin LukEv | VF |
| AYM25_RS10010 () | 1962076..1962615 | + | 540 | WP_000226886.1 | hypothetical protein | - |
| AYM25_RS10015 () | 1962628..1963415 | + | 788 | Protein_1881 | DUF1828 domain-containing protein | - |
| AYM25_RS15595 () | 1963876..1964084 | + | 209 | Protein_1882 | hypothetical protein | - |
| AYM25_RS10065 () | 1965872..1966426 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| AYM25_RS10075 () | 1966749..1968149 | - | 1401 | WP_000167538.1 | protoporphyrinogen oxidase | - |
| AYM25_RS10080 () | 1968173..1969096 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| AYM25_RS10085 () | 1969154..1970191 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| AYM25_RS10090 () | 1970181..1970291 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| AYM25_RS10095 () | 1970454..1970957 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus str. Newman | Prophage | TA10024 | NC_009641 | 1882747..1922929 | 0 |