MGE detailed information
MGE type: Genomic_island MGE length: 9351 bp
Accession: NZ_CP014270 Location: 4257785..4267135 Organism: Escherichia coli K-12 strain K-12 DHB4 Replicon: chromosome
Accession: NZ_CP014270 Location: 4257785..4267135 Organism: Escherichia coli K-12 strain K-12 DHB4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DHB4_RS21050 () | 4254516..4255235 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| DHB4_RS21055 () | 4255232..4256863 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| DHB4_RS21060 () | 4257044..4257274 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| DHB4_RS21065 () | 4257286..4257558 | + | 273 | WP_000405651.1 | N-acetyltransferase | - |
| DHB4_RS21070 () | 4257785..4258081 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| DHB4_RS21075 () | 4258109..4258282 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| DHB4_RS21080 () | 4258401..4259918 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| DHB4_RS21085 () | 4260155..4261612 | - | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| DHB4_RS21090 () | 4261671..4263818 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| DHB4_RS21095 () | 4263898..4265232 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| DHB4_RS21100 () | 4265597..4267135 | - | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| DHB4_RS21110 () | 4267934..4268509 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| DHB4_RS21115 () | 4268546..4270243 | - | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| DHB4_RS21120 () | 4270219..4270557 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| DHB4_RS21125 () | 4270673..4271974 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68443 | NZ_CP017979 | 4248154..4261393 | 0.009 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0 |