MGE detailed information
MGE type: Prophage MGE length: 12066 bp
Accession: NZ_CP014268 Location: 2126023..2138088 Organism: Escherichia coli B strain C2566 Replicon: chromosome
Accession: NZ_CP014268 Location: 2126023..2138088 Organism: Escherichia coli B strain C2566 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2566_RS25035 () | 2122012..2122059 | + | 48 | WP_211180494.1 | protein YnaN | - |
| C2566_RS10580 () | 2122073..2123056 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| C2566_RS10590 () | 2123534..2124907 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| C2566_RS10595 () | 2125036..2125971 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| C2566_RS23025 () | 2126023..2127258 | - | 1236 | WP_000040858.1 | Putative defective protein IntQ ; Integrase | Integrase |
| C2566_RS10605 () | 2127260..2127475 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| C2566_RS10610 () | 2127554..2127763 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 2127579..2127757 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2127579..2127757 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2127579..2127757 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 2127579..2127757 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| C2566_RS10615 () | 2127756..2127950 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| C2566_RS10620 () | 2128007..2128816 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| C2566_RS10625 () | 2128809..2129908 | - | 1100 | Protein_2010 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| C2566_RS10630 () | 2130010..2130285 | - | 276 | WP_000632297.1 | protein RacC | - |
| C2566_RS10635 () | 2130360..2130530 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| C2566_RS10640 () | 2130530..2130751 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| C2566_RS10645 () | 2131193..2131681 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| C2566_RS10650 () | 2131678..2131833 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| C2566_RS10655 () | 2131977..2132189 | + | 213 | WP_012775985.1 | phage lysis protein EssD | - |
| C2566_RS10660 () | 2132194..2132538 | + | 345 | WP_000193293.1 | YdfR family protein | - |
| C2566_RS10665 () | 2132504..2132776 | - | 273 | WP_000370546.1 | hypothetical protein | - |
| C2566_RS10670 () | 2132882..2133415 | + | 534 | WP_000992105.1 | lysozyme | - |
| C2566_RS24165 () | 2133632..2133817 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| C2566_RS10680 () | 2134014..2135471 | + | 1458 | WP_001097897.1 | Trk system potassium transporter TrkG | - |
| C2566_RS10685 () | 2135609..2136004 | + | 396 | WP_012775984.1 | ParB/Srx family N-terminal domain-containing protein | - |
| C2566_RS24170 () | 2135976..2136689 | + | 714 | Protein_2023 | hypothetical protein | - |
| C2566_RS10695 () | 2136686..2136964 | + | 279 | WP_000654171.1 | hypothetical protein | - |
| C2566_RS10700 () | 2136977..2137270 | + | 294 | WP_000355360.1 | hypothetical protein | - |
| C2566_RS10705 () | 2137290..2137400 | + | 111 | Protein_2026 | tail fiber assembly protein | - |
| C2566_RS10710 () | 2137498..2138088 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| C2566_RS10715 () | 2138405..2138638 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| C2566_RS24645 () | 2138707..2138820 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| C2566_RS24890 () | 2139160..2139333 | + | 174 | WP_001157925.1 | hypothetical protein | - |
| C2566_RS10720 () | 2139599..2140033 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| C2566_RS10725 () | 2140174..2141307 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli strain BL21 (TaKaRa) | Prophage | TA52902 | NZ_CP010816 | 1366333..1378398 | 0 |