MGE detailed information
MGE type: Genomic_island MGE length: 41886 bp
Accession: NZ_CP014225 Location: 953359..995244 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Accession: NZ_CP014225 Location: 953359..995244 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AW869_RS04685 () | 948995..950656 | + | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| AW869_RS04690 () | 950805..951146 | + | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| AW869_RS04695 () | 951208..951498 | - | 291 | WP_001117838.1 | RnfH family protein | - |
| AW869_RS04700 () | 951488..951925 | - | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| AW869_RS04705 () | 952096..952578 | + | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| AW869_RS04715 () | 953359..954600 | + | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| AW869_RS04720 () | 954844..955800 | - | 957 | WP_000510827.1 | hypothetical protein | - |
| AW869_RS04725 () | 955844..956056 | + | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| AW869_RS04730 () | 956185..957594 | + | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| AW869_RS04735 () | 957747..958373 | + | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| AW869_RS04740 () | 958551..960740 | - | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| AW869_RS04745 () | 960737..962353 | - | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| AW869_RS04750 () | 962713..962976 | - | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| AW869_RS04755 () | 963118..964191 | + | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| AW869_RS04760 () | 964184..964555 | + | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| AW869_RS04765 () | 964910..965773 | + | 864 | WP_000787597.1 | GTPase family protein | - |
| AW869_RS04770 () | 965865..966686 | + | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| AW869_RS04775 () | 966903..967604 | + | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| AW869_RS04780 () | 967645..967881 | + | 237 | WP_001144029.1 | hypothetical protein | - |
| AW869_RS04785 () | 967881..968324 | + | 444 | WP_000824222.1 | hypothetical protein | - |
| AW869_RS04790 () | 968348..968815 | + | 468 | WP_000702495.1 | hypothetical protein | - |
| AW869_RS04795 () | 969040..969354 | - | 315 | WP_000065803.1 | arsenate reductase | - |
| AW869_RS04800 () | 969367..970376 | - | 1010 | Protein_917 | arsenic transporter | - |
| AW869_RS04805 () | 970518..972221 | + | 1704 | WP_000896263.1 | hypothetical protein | - |
| AW869_RS23425 () | 972793..973016 | + | 224 | Protein_919 | DUF905 family protein | - |
| AW869_RS04810 () | 973119..973577 | + | 459 | WP_000211841.1 | antirestriction protein | - |
| AW869_RS04815 () | 973586..974068 | + | 483 | WP_001407480.1 | RadC family protein | - |
| AW869_RS23430 () | 974077..974277 | + | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| AW869_RS04820 () | 974315..974632 | + | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| AW869_RS04825 () | 974653..974982 | + | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| AW869_RS04830 () | 975346..979926 | - | 4581 | WP_010723187.1 | putative autotransporter | VF |
| AW869_RS23435 () | 979991..980110 | - | 120 | WP_001120794.1 | hypothetical protein | - |
| AW869_RS23445 () | 980265..980483 | - | 219 | WP_071524906.1 | recombinase family protein | - |
| AW869_RS25510 () | 980838..982211 | - | 1374 | Protein_928 | DUF5507 domain-containing protein | - |
| AW869_RS26025 () | 983597..985849 | + | 2253 | Protein_929 | hypothetical protein | - |
| AW869_RS04865 () | 986185..987162 | + | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| AW869_RS04870 () | 987182..988450 | + | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| AW869_RS04875 () | 988473..989921 | + | 1449 | WP_000772831.1 | NADP-dependent succinate-semialdehyde dehydrogenase | - |
| AW869_RS04880 () | 989935..991215 | + | 1281 | WP_001087611.1 | 4-aminobutyrate aminotransferase GabT | VF |
| AW869_RS04885 () | 991453..992853 | + | 1401 | WP_001295173.1 | GABA permease | - |
| AW869_RS04890 () | 992874..993536 | + | 663 | WP_000156811.1 | DNA-binding transcriptional regulator CsiR | - |
| AW869_RS04895 () | 993537..993986 | - | 450 | WP_000522415.1 | potassium binding protein Kbp | - |
| AW869_RS04900 () | 994070..994228 | - | 159 | WP_000508177.1 | YqaE/Pmp3 family membrane protein | - |
| AW869_RS04905 () | 994411..994710 | + | 300 | WP_000137280.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| AW869_RS04910 () | 994720..995244 | + | 525 | WP_001229442.1 | thiosulfate sulfurtransferase YgaP | - |
| AW869_RS04915 () | 995291..995695 | - | 405 | WP_000115383.1 | DNA-binding protein StpA | - |
| AW869_RS04920 () | 996364..996813 | + | 450 | WP_000492656.1 | L-alanine exporter AlaE | - |
| AW869_RS04925 () | 996850..997194 | - | 345 | WP_000281320.1 | DUF2002 family protein | - |
| AW869_RS04930 () | 997346..997675 | + | 330 | WP_001295174.1 | DUF883 domain-containing protein | - |
| AW869_RS04935 () | 997923..998168 | + | 246 | WP_001223227.1 | glutaredoxin-like protein NrdH | - |
| AW869_RS04940 () | 998165..998575 | + | 411 | WP_000080947.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0.007 |