MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP013952 Location: 3102807..3134687 Organism: Escherichia coli strain HST04 Replicon: chromosome
Accession: NZ_CP013952 Location: 3102807..3134687 Organism: Escherichia coli strain HST04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWH44_RS16025 () | 3098991..3100259 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| AWH44_RS16030 () | 3100279..3101256 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| AWH44_RS23865 () | 3101592..3103844 | - | 2253 | Protein_2900 | hypothetical protein | - |
| AWH44_RS23870 () | 3105230..3106603 | + | 1374 | Protein_2901 | DUF5507 domain-containing protein | - |
| AWH44_RS16065 () | 3106967..3107176 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| AWH44_RS16075 () | 3107331..3107450 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| AWH44_RS16080 () | 3107515..3112095 | + | 4581 | WP_010723187.1 | hypothetical protein | VF |
| AWH44_RS16085 () | 3112459..3112788 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| AWH44_RS16090 () | 3112809..3113126 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| AWH44_RS16095 () | 3113164..3113364 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| AWH44_RS16100 () | 3113373..3113855 | - | 483 | WP_001407480.1 | RadC family protein | - |
| AWH44_RS16105 () | 3113864..3114322 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| AWH44_RS16110 () | 3114425..3114648 | - | 224 | Protein_2910 | DUF905 family protein | - |
| AWH44_RS16115 () | 3115220..3116923 | - | 1704 | WP_001698958.1 | hypothetical protein | - |
| AWH44_RS16120 () | 3117065..3118074 | + | 1010 | Protein_2912 | arsenic transporter | - |
| AWH44_RS16125 () | 3118087..3118401 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| AWH44_RS16130 () | 3118626..3119093 | - | 468 | WP_000702495.1 | hypothetical protein | - |
| AWH44_RS16135 () | 3119117..3119560 | - | 444 | WP_000824222.1 | hypothetical protein | - |
| AWH44_RS16140 () | 3119560..3119796 | - | 237 | WP_001144029.1 | hypothetical protein | - |
| AWH44_RS16145 () | 3119837..3120538 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| AWH44_RS16150 () | 3120755..3121576 | - | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| AWH44_RS16155 () | 3121668..3122531 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| AWH44_RS16160 () | 3122886..3123257 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| AWH44_RS16165 () | 3123250..3124323 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| AWH44_RS16170 () | 3124465..3124728 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| AWH44_RS16175 () | 3125088..3126704 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| AWH44_RS16180 () | 3126701..3128890 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| AWH44_RS16185 () | 3129068..3129694 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| AWH44_RS16190 () | 3129847..3131256 | - | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| AWH44_RS16195 () | 3131385..3131597 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| AWH44_RS16200 () | 3131641..3132597 | + | 957 | WP_000510827.1 | hypothetical protein | - |
| AWH44_RS16205 () | 3132841..3134082 | - | 1242 | WP_000101723.1 | hypothetical protein ; Integrase | Integrase |
| AWH44_RS16215 () | 3134863..3135345 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| AWH44_RS16220 () | 3135516..3135953 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| AWH44_RS16225 () | 3135943..3136233 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| AWH44_RS16230 () | 3136295..3136636 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| AWH44_RS16235 () | 3136785..3138446 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| AWH44_RS16240 () | 3138532..3139410 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |