MGE detailed information
MGE type: Genomic_island MGE length: 8868 bp
Accession: NZ_CP013952 Location: 1527513..1536380 Organism: Escherichia coli strain HST04 Replicon: chromosome
Accession: NZ_CP013952 Location: 1527513..1536380 Organism: Escherichia coli strain HST04 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWH44_RS08040 () | 1523609..1523947 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| AWH44_RS08045 () | 1523923..1525620 | + | 1698 | WP_000068922.1 | protein-disulfide reductase DsbD | - |
| AWH44_RS08050 () | 1525657..1526232 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| AWH44_RS08065 () | 1527031..1528568 | + | 1538 | Protein_1463 | lysine decarboxylation/transport transcriptional activator CadC | - |
| AWH44_RS08070 () | 1528933..1530267 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| AWH44_RS08075 () | 1530347..1532494 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| AWH44_RS08080 () | 1532553..1534010 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| AWH44_RS08085 () | 1534247..1535764 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| AWH44_RS08090 () | 1535883..1536056 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| AWH44_RS08095 () | 1536084..1536380 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| AWH44_RS08105 () | 1536607..1536879 | - | 273 | WP_000405651.1 | N-acetyltransferase | - |
| AWH44_RS08110 () | 1536891..1537121 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| AWH44_RS08115 () | 1537302..1538933 | + | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| AWH44_RS08120 () | 1538930..1539649 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.001 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.001 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68443 | NZ_CP017979 | 4248154..4261393 | 0.01 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.001 |