NZ_CP0139431656975..1812337

MGE detailed information

MGE type: Prophage        MGE length: 155363 bp
Accession: NZ_CP013943        Location: 1656975..1812337         Organism: Staphylococcus epidermidis strain DAR1907       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
SE1UMMC_RS08330 () 1652846..1653679 - 834 WP_101750549.1 hypothetical protein -
SE1UMMC_RS08335 () 1654237..1654827 - 591 WP_049315915.1 hypothetical protein -
SE1UMMC_RS08340 () 1654832..1655722 - 891 WP_101750550.1 DUF4868 domain-containing protein -
SE1UMMC_RS08350 () 1656975..1657301 - 327 WP_032604672.1 DNA-directed RNA polymerase sigma-70 factor -
SE1UMMC_RS08355 () 1657298..1657615 - 318 WP_101750551.1 hypothetical protein -
SE1UMMC_RS08360 () 1657612..1658145 - 534 WP_101750552.1 spore coat protein -
SE1UMMC_RS08365 () 1658206..1658679 - 474 WP_002467963.1 phage terminase small subunit P27 family -
SE1UMMC_RS08370 () 1660083..1660538 - 456 WP_012085738.1 hypothetical protein -
SE1UMMC_RS08375 () 1660551..1661189 - 639 WP_012085736.1 hypothetical protein -
SE1UMMC_RS08385 () 1661371..1661838 - 468 WP_049401766.1 hypothetical protein -
SE1UMMC_RS08390 () 1661838..1662113 - 276 WP_101750553.1 pathogenicity island protein -
SE1UMMC_RS08395 () 1662100..1662903 - 804 WP_049401768.1 bifunctional DNA primase/polymerase -
SE1UMMC_RS08400 () 1663069..1664676 - 1608 WP_049401769.1 hypothetical protein -
SE1UMMC_RS08405 () 1664735..1665031 - 297 WP_046026417.1 DUF1474 family protein -
SE1UMMC_RS08410 () 1665031..1665378 - 348 WP_049401770.1 hypothetical protein -
SE1UMMC_RS08415 () 1665380..1665583 - 204 WP_049401771.1 hypothetical protein -
SE1UMMC_RS13940 () 1665587..1665730 - 144 WP_176747229.1 hypothetical protein -
SE1UMMC_RS08420 () 1665723..1666043 - 321 WP_049401772.1 helix-turn-helix domain-containing protein -
SE1UMMC_RS08425 () 1666057..1666698 - 642 WP_032603590.1 Bro-N domain-containing protein -
SE1UMMC_RS08430 () 1666702..1666920 - 219 WP_032603591.1 helix-turn-helix transcriptional regulator -
SE1UMMC_RS08435 () 1667090..1667722 + 633 WP_032603593.1 helix-turn-helix domain-containing protein -
SE1UMMC_RS08440 () 1667731..1668906 + 1176 WP_032603595.1 hypothetical protein ; Integrase Integrase
SE1UMMC_RS08445 () 1669021..1670640 - 1620 WP_001830447.1 hypothetical protein VF
SE1UMMC_RS08450 () 1670696..1670980 - 285 WP_001830378.1 co-chaperone GroES -
SE1UMMC_RS08455 () 1671155..1671895 + 741 WP_001830367.1 CPBP family intramembrane metalloprotease -
SE1UMMC_RS08460 () 1671955..1673301 - 1347 WP_002489467.1 hypothetical protein -
SE1UMMC_RS08465 () 1673653..1674438 + 786 WP_001830000.1 carbon-nitrogen family hydrolase -
SE1UMMC_RS08470 () 1674819..1674896 - 78 WP_002494082.1 delta-hemolysin -
SE1UMMC_RS08475 () 1675214..1675798 + 585 WP_001830005.1 accessory gene regulator AgrB -
SE1UMMC_RS08480 () 1675782..1675922 + 141 WP_001830021.1 cyclic lactone autoinducer peptide -
SE1UMMC_RS08485 () 1675949..1677238 + 1290 WP_002440376.1 GHKL domain-containing protein -
SE1UMMC_RS08490 () 1677255..1677971 + 717 WP_001829999.1 LytTR family DNA-binding domain-containing protein -
SE1UMMC_RS08495 () 1678039..1678998 - 960 WP_002469008.1 carbohydrate kinase -
SE1UMMC_RS08500 () 1679005..1680477 - 1473 WP_002469009.1 sucrose-6-phosphate hydrolase -
SE1UMMC_RS08510 () 1680737..1681690 - 954 WP_002468995.1 LacI family DNA-binding transcriptional regulator -
SE1UMMC_RS08515 () 1681826..1683076 - 1251 WP_002477475.1 ammonium transporter -
SE1UMMC_RS08520 () 1683510..1683734 - 225 WP_002469006.1 sulfurtransferase TusA family protein -
SE1UMMC_RS08525 () 1683786..1684541 - 756 Protein_1575 YeeE/YedE family protein -
SE1UMMC_RS08530 () 1684616..1686154 - 1539 WP_001260014.1 hypothetical protein ; Integrase Integrase
SE1UMMC_RS08535 () 1686144..1686725 - 582 WP_002504503.1 DNA-binding protein -
SE1UMMC_RS08540 () 1686927..1687520 - 594 WP_001130902.1 RusA family crossover junction endodeoxyribonuclease -
SE1UMMC_RS08545 () 1687504..1687899 - 396 WP_002504504.1 hypothetical protein -
SE1UMMC_RS08550 () 1687901..1688647 - 747 WP_002504505.1 NTP pyrophosphohydrolase -
SE1UMMC_RS08555 () 1688660..1688899 - 240 WP_002504506.1 hypothetical protein -
SE1UMMC_RS08560 () 1688915..1689163 - 249 WP_002504507.1 thioredoxin family protein -
SE1UMMC_RS08565 () 1689204..1689806 - 603 WP_002504508.1 AAA family ATPase -
SE1UMMC_RS08570 () 1689834..1690856 - 1023 WP_002504509.1 class 1b ribonucleoside-diphosphate reductase subunit beta -
SE1UMMC_RS08575 () 1690902..1691270 - 369 Protein_1585 intein-containing ribonucleoside-diphosphate reductase subunit alpha -
SE1UMMC_RS08580 () 1691449..1692273 - 825 WP_002504510.1 NUMOD4 motif-containing HNH endonuclease -
SE1UMMC_RS08585 () 1692430..1695336 - 2907 Protein_1587 intein-containing class 1b ribonucleoside-diphosphate reductase subunit alpha -
SE1UMMC_RS08590 () 1695358..1695804 - 447 WP_002504512.1 hypothetical protein -
SE1UMMC_RS08595 () 1695804..1696217 - 414 WP_002504513.1 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI -
SE1UMMC_RS13945 () 1696247..1696399 - 153 WP_002504514.1 hypothetical protein -
SE1UMMC_RS08600 () 1696418..1697119 - 702 WP_002504515.1 hypothetical protein -
SE1UMMC_RS08605 () 1697131..1697640 - 510 WP_002504516.1 siphovirus Gp157 family protein -
SE1UMMC_RS08610 () 1697766..1698362 - 597 WP_002504517.1 hypothetical protein -
SE1UMMC_RS08615 () 1698362..1698592 - 231 WP_000824898.1 hypothetical protein -
SE1UMMC_RS08620 () 1698606..1698788 - 183 WP_000356944.1 hypothetical protein -
SE1UMMC_RS08625 () 1698791..1699144 - 354 WP_000792728.1 hypothetical protein -
SE1UMMC_RS08630 () 1699177..1700175 - 999 WP_000598581.1 DNA cytosine methyltransferase -
SE1UMMC_RS08635 () 1700190..1700876 - 687 WP_002504519.1 methyltransferase domain-containing protein -
SE1UMMC_RS08640 () 1700866..1701057 - 192 WP_002504520.1 hypothetical protein -
SE1UMMC_RS08645 () 1701050..1701661 - 612 WP_002504521.1 nucleoside 2-deoxyribosyltransferase -
SE1UMMC_RS08650 () 1701676..1701858 - 183 WP_002504522.1 hypothetical protein -
SE1UMMC_RS08655 () 1701858..1702109 - 252 WP_000865652.1 hypothetical protein -
SE1UMMC_RS08660 () 1702115..1702438 - 324 WP_002504524.1 hypothetical protein -
SE1UMMC_RS08665 () 1702419..1702706 - 288 WP_002504525.1 hypothetical protein -
SE1UMMC_RS08670 () 1702699..1702965 - 267 WP_002504526.1 hypothetical protein -
SE1UMMC_RS13950 () 1702977..1703150 - 174 WP_000119719.1 hypothetical protein -
SE1UMMC_RS08675 () 1703264..1703653 - 390 WP_002504527.1 hypothetical protein -
SE1UMMC_RS08680 () 1703741..1705039 - 1299 WP_010959221.1 ATP-dependent DNA ligase -
SE1UMMC_RS08685 () 1705049..1705363 - 315 WP_002504529.1 hypothetical protein -
SE1UMMC_RS08690 () 1705501..1705881 - 381 WP_002504530.1 hypothetical protein -
SE1UMMC_RS08695 () 1705993..1708479 - 2487 WP_002504531.1 hypothetical protein -
SE1UMMC_RS08700 () 1708942..1710390 - 1449 WP_010959223.1 PHP domain-containing protein -
SE1UMMC_RS08705 () 1710403..1710777 - 375 WP_002504533.1 hypothetical protein -
SE1UMMC_RS08710 () 1710944..1711504 + 561 WP_002504534.1 hypothetical protein -
SE1UMMC_RS08715 () 1711857..1712261 + 405 WP_002504535.1 YolD-like family protein -
SE1UMMC_RS08720 () 1712509..1713150 - 642 WP_002504537.1 hypothetical protein -
SE1UMMC_RS08725 () 1713256..1713978 - 723 WP_002504538.1 hypothetical protein -
SE1UMMC_RS08730 () 1714087..1714887 - 801 WP_000686449.1 metallophosphoesterase -
SE1UMMC_RS08735 () 1714891..1715385 - 495 WP_010959224.1 hypothetical protein -
SE1UMMC_RS08740 () 1715442..1715711 - 270 WP_000755772.1 hypothetical protein -
SE1UMMC_RS08745 () 1715695..1715886 - 192 WP_002504556.1 hypothetical protein -
SE1UMMC_RS08750 () 1716189..1716584 - 396 WP_002504557.1 type II toxin-antitoxin system death-on-curing family toxin Toxin Detail
SE1UMMC_RS08755 () 1716584..1716814 - 231 WP_002504558.1 addiction module antitoxin Antitoxin Detail
SE1UMMC_RS08760 () 1716977..1717495 - 519 WP_002504559.1 metallophosphoesterase -
SE1UMMC_RS08765 () 1717495..1718145 - 651 WP_002504560.1 hypothetical protein -
SE1UMMC_RS08770 () 1718145..1718462 - 318 WP_002504561.1 hypothetical protein -
SE1UMMC_RS08775 () 1718455..1719180 - 726 WP_002504562.1 metallophosphoesterase -
SE1UMMC_RS08780 () 1719180..1719401 - 222 WP_002504563.1 hypothetical protein -
SE1UMMC_RS13955 () 1719421..1719597 - 177 WP_002504564.1 hypothetical protein -
SE1UMMC_RS08785 () 1719590..1720132 - 543 WP_101750554.1 hypothetical protein -
SE1UMMC_RS08790 () 1720148..1720420 - 273 WP_002504566.1 hypothetical protein -
SE1UMMC_RS08795 () 1720446..1720601 - 156 WP_002504567.1 transcriptional activator RinB -
SE1UMMC_RS08800 () 1720598..1720882 - 285 WP_002504568.1 hypothetical protein -
SE1UMMC_RS08805 () 1720898..1721083 - 186 WP_001187008.1 hypothetical protein -
SE1UMMC_RS08810 () 1721068..1721247 - 180 WP_002504569.1 hypothetical protein -
SE1UMMC_RS08815 () 1721263..1721745 - 483 WP_002504570.1 hypothetical protein -
SE1UMMC_RS08820 () 1721747..1721935 - 189 WP_002504571.1 Lar family restriction alleviation protein -
SE1UMMC_RS08825 () 1721942..1722145 - 204 WP_002504572.1 hypothetical protein -
SE1UMMC_RS08830 () 1722150..1722416 - 267 WP_002504573.1 hypothetical protein -
SE1UMMC_RS08835 () 1722438..1722713 - 276 WP_002504574.1 hypothetical protein -
SE1UMMC_RS08840 () 1722736..1722975 - 240 WP_002504575.1 hypothetical protein -
SE1UMMC_RS08845 () 1722997..1723221 - 225 WP_000359469.1 hypothetical protein -
SE1UMMC_RS08850 () 1723227..1723574 - 348 WP_000862563.1 thermonuclease family protein -
SE1UMMC_RS08855 () 1723571..1723981 - 411 WP_002504576.1 hypothetical protein -
SE1UMMC_RS08860 () 1724021..1724284 - 264 WP_000312937.1 hypothetical protein -
SE1UMMC_RS08865 () 1724287..1724595 - 309 WP_002504577.1 hypothetical protein -
SE1UMMC_RS08870 () 1724887..1725162 - 276 WP_002504579.1 hypothetical protein -
SE1UMMC_RS08875 () 1725175..1725372 - 198 WP_002504580.1 hypothetical protein -
SE1UMMC_RS08880 () 1725383..1726429 - 1047 WP_002504581.1 hypothetical protein -
SE1UMMC_RS08885 () 1726473..1727147 + 675 WP_001106022.1 IS6 family transposase IS257R1 Transposase
SE1UMMC_RS08890 () 1727203..1727601 - 399 Protein_1651 DegV family protein -
SE1UMMC_RS08895 () 1727726..1728898 + 1173 WP_000195429.1 IS256 family transposase IS256 Transposase
SE1UMMC_RS08900 () 1729028..1730467 - 1440 WP_001028144.1 hypothetical protein ARG
SE1UMMC_RS08905 () 1730468..1730860 - 393 WP_000393259.1 GNAT family N-acetyltransferase -
SE1UMMC_RS08910 () 1730917..1732089 - 1173 WP_000195429.1 IS256 family transposase IS256 Transposase
SE1UMMC_RS08915 () 1732167..1732670 - 504 WP_042742622.1 trimethoprim-resistant dihydrofolate reductase DfrC -
SE1UMMC_RS08920 () 1732712..1733668 - 957 WP_000282655.1 thymidylate synthase -
SE1UMMC_RS08925 () 1733782..1734456 + 675 WP_001106019.1 IS6 family transposase IS257R2 Transposase
SE1UMMC_RS08930 () 1734511..1734885 - 375 Protein_1659 MBL fold metallo-hydrolase -
SE1UMMC_RS08935 () 1735078..1736844 - 1767 WP_010959235.1 single-stranded DNA-binding protein -
SE1UMMC_RS08940 () 1736847..1737959 - 1113 WP_002504675.1 hypothetical protein -
SE1UMMC_RS08945 () 1737976..1739508 - 1533 WP_002504676.1 replicative DNA helicase -
SE1UMMC_RS08950 () 1739530..1740048 - 519 WP_002504677.1 hypothetical protein -
SE1UMMC_RS08955 () 1740125..1741093 - 969 WP_002504678.1 ATP-binding protein -
SE1UMMC_RS08960 () 1741217..1742176 - 960 WP_000852323.1 hypothetical protein -
SE1UMMC_RS08965 () 1742220..1742900 - 681 WP_000668931.1 hypothetical protein -
SE1UMMC_RS08970 () 1742918..1743406 - 489 WP_002504679.1 hypothetical protein -
SE1UMMC_RS08975 () 1743422..1743670 - 249 WP_101750555.1 hypothetical protein -
SE1UMMC_RS08980 () 1743830..1744834 - 1005 WP_002504681.1 hypothetical protein -
SE1UMMC_RS08985 () 1744846..1746126 - 1281 WP_002504682.1 hypothetical protein -
SE1UMMC_RS08990 () 1746437..1747480 - 1044 WP_002504683.1 hypothetical protein ; Integrase Integrase
SE1UMMC_RS08995 () 1748164..1748592 - 429 WP_002504685.1 hypothetical protein -
SE1UMMC_RS09000 () 1748670..1749191 - 522 WP_012099556.1 hypothetical protein -
SE1UMMC_RS09005 () 1749191..1749643 - 453 WP_010959239.1 hypothetical protein -
SE1UMMC_RS09010 () 1749759..1750439 - 681 WP_010959240.1 hypothetical protein -
SE1UMMC_RS09015 () 1750468..1750731 - 264 WP_002504623.1 hypothetical protein -
SE1UMMC_RS09020 () 1750824..1751147 - 324 WP_002504624.1 hypothetical protein -
SE1UMMC_RS09025 () 1751191..1751850 - 660 WP_002504625.1 antirestriction protein ArdA -
SE1UMMC_RS09030 () 1752003..1752392 - 390 WP_010959241.1 hypothetical protein -
SE1UMMC_RS09035 () 1752529..1752789 - 261 WP_010959242.1 hypothetical protein -
SE1UMMC_RS09040 () 1752864..1753079 - 216 WP_002504552.1 hypothetical protein -
SE1UMMC_RS09045 () 1753259..1753543 - 285 WP_002504554.1 hypothetical protein -
SE1UMMC_RS09050 () 1753599..1753796 - 198 WP_049391959.1 hypothetical protein -
SE1UMMC_RS09055 () 1755655..1756530 - 876 WP_002504834.1 hypothetical protein -
SE1UMMC_RS09060 () 1756566..1758851 - 2286 WP_101750556.1 ATP-dependent RecD-like DNA helicase -
SE1UMMC_RS09065 () 1758987..1760483 + 1497 WP_002504833.1 hypothetical protein -
SE1UMMC_RS09070 () 1760743..1761072 + 330 WP_002504832.1 HU family DNA-binding protein -
SE1UMMC_RS09075 () 1761098..1761283 + 186 WP_000057341.1 YonK family protein -
SE1UMMC_RS09080 () 1761292..1762476 + 1185 WP_002504831.1 hypothetical protein -
SE1UMMC_RS09085 () 1764171..1765055 + 885 WP_001007716.1 hypothetical protein -
SE1UMMC_RS09090 () 1765048..1766847 + 1800 WP_101750557.1 terminase family protein -
SE1UMMC_RS09095 () 1766865..1768427 + 1563 WP_000389594.1 hypothetical protein -
SE1UMMC_RS09100 () 1768420..1769799 + 1380 WP_002504829.1 hypothetical protein -
SE1UMMC_RS09105 () 1769827..1770267 + 441 WP_002504828.1 hypothetical protein -
SE1UMMC_RS09110 () 1770306..1771307 + 1002 WP_101750558.1 hypothetical protein -
SE1UMMC_RS09115 () 1771382..1771933 + 552 WP_000985467.1 hypothetical protein -
SE1UMMC_RS09120 () 1771951..1772385 + 435 WP_000134539.1 hypothetical protein -
SE1UMMC_RS09125 () 1772375..1772692 + 318 WP_042742626.1 hypothetical protein -
SE1UMMC_RS09130 () 1772696..1773361 + 666 WP_000384369.1 hypothetical protein -
SE1UMMC_RS09135 () 1773351..1773872 + 522 WP_001177112.1 hypothetical protein -
SE1UMMC_RS09140 () 1773878..1774750 + 873 WP_000391855.1 hypothetical protein -
SE1UMMC_RS09145 () 1774789..1775580 + 792 WP_002504825.1 hypothetical protein -
SE1UMMC_RS09150 () 1775664..1776221 + 558 WP_000700062.1 hypothetical protein -
SE1UMMC_RS09155 () 1776221..1776694 + 474 WP_002504823.1 hypothetical protein -
SE1UMMC_RS09160 () 1776710..1777726 + 1017 WP_002504822.1 hypothetical protein ; Integrase Integrase
SE1UMMC_RS09165 () 1777823..1786096 + 8274 WP_002504821.1 phage tail tape measure protein -
SE1UMMC_RS09170 () 1786118..1788199 + 2082 WP_002504820.1 hypothetical protein -
SE1UMMC_RS09175 () 1788260..1796305 + 8046 WP_002504819.1 hypothetical protein -
SE1UMMC_RS09180 () 1796308..1796682 + 375 WP_002504818.1 hypothetical protein -
SE1UMMC_RS13960 () 1796675..1796842 + 168 WP_002504817.1 hypothetical protein -
SE1UMMC_RS09185 () 1796884..1799553 + 2670 WP_002504816.1 tail fiber domain-containing protein -
SE1UMMC_RS09190 () 1799660..1800061 + 402 WP_002504815.1 hypothetical protein -
SE1UMMC_RS09195 () 1800043..1800555 + 513 WP_002504814.1 hypothetical protein -
SE1UMMC_RS09200 () 1800577..1800906 + 330 WP_002504813.1 phage holin -
SE1UMMC_RS09205 () 1800958..1803351 + 2394 WP_002504812.1 SGNH/GDSL hydrolase family protein -
SE1UMMC_RS09210 () 1803428..1804930 + 1503 WP_002504811.1 N-acetylmuramoyl-L-alanine amidase -
SE1UMMC_RS09215 () 1805006..1805206 - 201 WP_002504810.1 hypothetical protein -
SE1UMMC_RS13965 () 1805586..1805762 - 177 WP_002504809.1 hypothetical protein -
SE1UMMC_RS09220 () 1805901..1807547 - 1647 WP_002504808.1 hypothetical protein -
SE1UMMC_RS09225 () 1807690..1808295 - 606 WP_002504807.1 LPXTG cell wall anchor domain-containing protein -
SE1UMMC_RS09230 () 1808613..1808912 - 300 Protein_1721 YeeE/YedE family protein -
SE1UMMC_RS09235 () 1808999..1809280 - 282 WP_002497516.1 PH domain-containing protein -
SE1UMMC_RS09240 () 1809421..1810056 - 636 WP_002468998.1 redox-sensing transcriptional repressor Rex -
SE1UMMC_RS09245 () 1810403..1812337 + 1935 WP_002468991.1 ABC-F family ATP-binding cassette domain-containing protein -
SE1UMMC_RS09250 () 1812679..1814295 + 1617 WP_002469004.1 AAA family ATPase -
SE1UMMC_RS09255 () 1814378..1815400 - 1023 WP_002469005.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
SE1UMMC_RS09260 () 1815397..1815858 - 462 WP_001829994.1 ribosomal protein S18-alanine N-acetyltransferase -
SE1UMMC_RS09265 () 1815831..1816493 - 663 WP_101750559.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
SE1UMMC_RS09270 () 1816474..1816935 - 462 WP_002469001.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance
Staphylococcus epidermidis isolate BPH0662 Prophage TA10179 NZ_LT571449 1774530..1906238 0.005