MGE detailed information
MGE type: Prophage MGE length: 49455 bp
Accession: NZ_CP013922 Location: 640799..690253 Organism: Staphylococcus xylosus strain S170 Replicon: chromosome
Accession: NZ_CP013922 Location: 640799..690253 Organism: Staphylococcus xylosus strain S170 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AWC37_RS03045 () | 635963..636574 | + | 612 | WP_029379031.1 | succinate dehydrogenase cytochrome b558 subunit | - |
| AWC37_RS03050 () | 636620..638383 | + | 1764 | WP_029379030.1 | succinate dehydrogenase flavoprotein subunit | - |
| AWC37_RS03055 () | 638386..639198 | + | 813 | WP_029379029.1 | succinate dehydrogenase iron-sulfur subunit | - |
| AWC37_RS03060 () | 639406..640206 | + | 801 | WP_029379028.1 | glutamate racemase | - |
| AWC37_RS03065 () | 640218..640799 | + | 582 | WP_029379027.1 | XTP/dITP diphosphatase | - |
| AWC37_RS03070 () | 640799..641308 | + | 510 | WP_058625608.1 | metallophosphoesterase | - |
| AWC37_RS03080 () | 641835..642878 | - | 1044 | WP_081224921.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| AWC37_RS03085 () | 642975..643172 | + | 198 | WP_081224922.1 | hypothetical protein | - |
| AWC37_RS03090 () | 643169..643576 | - | 408 | Protein_616 | TIR domain-containing protein | - |
| AWC37_RS03095 () | 643570..644007 | - | 438 | Protein_617 | DUF4231 domain-containing protein | - |
| AWC37_RS03100 () | 644077..645123 | - | 1047 | WP_081225252.1 | thermonuclease family protein | - |
| AWC37_RS03105 () | 645462..645962 | - | 501 | WP_081224923.1 | PH domain-containing protein | - |
| AWC37_RS03110 () | 646126..646884 | - | 759 | WP_081224924.1 | XRE family transcriptional regulator | - |
| AWC37_RS03115 () | 647029..647286 | + | 258 | WP_196796563.1 | helix-turn-helix domain-containing protein | - |
| AWC37_RS03120 () | 647405..648055 | - | 651 | WP_081224925.1 | hypothetical protein | - |
| AWC37_RS13960 () | 648175..648342 | + | 168 | WP_182475317.1 | hypothetical protein | - |
| AWC37_RS03125 () | 648367..648615 | - | 249 | WP_081224926.1 | DUF3892 domain-containing protein | - |
| AWC37_RS03130 () | 648791..649468 | - | 678 | WP_119609916.1 | hypothetical protein | - |
| AWC37_RS03135 () | 649669..649872 | - | 204 | WP_081224927.1 | hypothetical protein | - |
| AWC37_RS03140 () | 649947..650252 | + | 306 | WP_081224928.1 | DUF771 domain-containing protein | - |
| AWC37_RS03145 () | 650258..650437 | + | 180 | WP_081224929.1 | hypothetical protein | - |
| AWC37_RS03150 () | 650512..650811 | + | 300 | WP_081224930.1 | hypothetical protein | - |
| AWC37_RS03155 () | 650856..651767 | + | 912 | WP_081225255.1 | YqaJ viral recombinase family protein | - |
| AWC37_RS03160 () | 651779..652594 | + | 816 | WP_081224931.1 | recombinase RecT | - |
| AWC37_RS03165 () | 652636..653487 | + | 852 | WP_081224932.1 | DnaD domain protein | - |
| AWC37_RS03170 () | 653585..654388 | + | 804 | WP_119609926.1 | ATP-binding protein | - |
| AWC37_RS03175 () | 654385..654585 | + | 201 | WP_061050642.1 | hypothetical protein | - |
| AWC37_RS03180 () | 654563..654769 | + | 207 | WP_061050641.1 | hypothetical protein | - |
| AWC37_RS03185 () | 654815..654967 | + | 153 | WP_196796564.1 | hypothetical protein | - |
| AWC37_RS03190 () | 654967..655290 | + | 324 | WP_081224934.1 | hypothetical protein | - |
| AWC37_RS03195 () | 655330..655644 | + | 315 | WP_081224935.1 | hypothetical protein | - |
| AWC37_RS03200 () | 655667..655924 | - | 258 | WP_081224936.1 | hypothetical protein | - |
| AWC37_RS03205 () | 656151..656342 | + | 192 | WP_081224937.1 | hypothetical protein | - |
| AWC37_RS13820 () | 656342..656500 | + | 159 | WP_119609918.1 | DUF1514 domain-containing protein | - |
| AWC37_RS03210 () | 656519..656926 | + | 408 | WP_081224938.1 | sigma-70 family RNA polymerase sigma factor | - |
| AWC37_RS03215 () | 657109..657369 | + | 261 | WP_081224939.1 | hypothetical protein | - |
| AWC37_RS03220 () | 657451..657972 | + | 522 | WP_081224940.1 | terminase small subunit | - |
| AWC37_RS03225 () | 657965..659173 | + | 1209 | WP_081224941.1 | PBSX family phage terminase large subunit | - |
| AWC37_RS03230 () | 659186..660595 | + | 1410 | WP_081224942.1 | phage portal protein | - |
| AWC37_RS03235 () | 660558..661514 | + | 957 | WP_081224943.1 | phage head morphogenesis protein | - |
| AWC37_RS03240 () | 661514..661708 | + | 195 | WP_081224944.1 | hypothetical protein | - |
| AWC37_RS03245 () | 661826..662350 | + | 525 | WP_081224945.1 | phage scaffolding protein | - |
| AWC37_RS03250 () | 662362..663294 | + | 933 | WP_119609920.1 | sugar-binding protein | - |
| AWC37_RS03255 () | 663308..663601 | + | 294 | WP_081224947.1 | Rho termination factor N-terminal domain-containing protein | - |
| AWC37_RS03260 () | 663601..663897 | + | 297 | WP_081224948.1 | phage head-tail adapter protein | - |
| AWC37_RS03265 () | 663899..664234 | + | 336 | WP_081224949.1 | phage head closure protein | - |
| AWC37_RS03270 () | 664221..664634 | + | 414 | WP_081224950.1 | HK97 gp10 family phage protein | - |
| AWC37_RS03275 () | 664646..665068 | + | 423 | WP_081224951.1 | DUF3168 domain-containing protein | - |
| AWC37_RS03280 () | 665074..665619 | + | 546 | WP_081224952.1 | phage tail protein | - |
| AWC37_RS03285 () | 665673..666167 | + | 495 | WP_081224953.1 | hypothetical protein | - |
| AWC37_RS03290 () | 666230..666538 | + | 309 | WP_081224954.1 | hypothetical protein | - |
| AWC37_RS03295 () | 666541..669630 | + | 3090 | WP_081224955.1 | hypothetical protein | - |
| AWC37_RS03300 () | 669642..670568 | + | 927 | WP_081224956.1 | phage tail family protein | - |
| AWC37_RS03305 () | 670580..672433 | + | 1854 | WP_081224957.1 | phage tail protein | - |
| AWC37_RS03310 () | 672448..674355 | + | 1908 | WP_081224958.1 | hypothetical protein | - |
| AWC37_RS03315 () | 674355..676214 | + | 1860 | WP_196796565.1 | BppU family phage baseplate upper protein | - |
| AWC37_RS03320 () | 676214..676546 | + | 333 | WP_081224960.1 | DUF2977 domain-containing protein | - |
| AWC37_RS03325 () | 676603..678489 | + | 1887 | WP_081224961.1 | Bifunctional autolysin | VF |
| AWC37_RS03330 () | 678524..678811 | + | 288 | WP_081224962.1 | hypothetical protein | - |
| AWC37_RS13965 () | 679199..680317 | + | 1119 | WP_182475319.1 | hypothetical protein | - |
| AWC37_RS03340 () | 680453..680560 | + | 108 | WP_081224963.1 | putative holin-like toxin | Toxin Detail |
| - () | 680552..680683 | - | 132 | NuclAT_0 | - | Antitoxin Detail |
| - () | 680552..680683 | - | 132 | NuclAT_0 | - | Antitoxin Detail |
| - () | 680552..680683 | - | 132 | NuclAT_0 | - | Antitoxin Detail |
| - () | 680552..680683 | - | 132 | NuclAT_0 | - | Antitoxin Detail |
| AWC37_RS03345 () | 680765..681022 | + | 258 | WP_081224964.1 | phage holin | Toxin Detail |
| AWC37_RS03350 () | 681450..682397 | + | 948 | WP_081225257.1 | peptidoglycan recognition protein family protein | - |
| AWC37_RS03355 () | 682641..683684 | - | 1044 | WP_081224965.1 | hypothetical protein | - |
| AWC37_RS13825 () | 684214..684375 | + | 162 | WP_155238587.1 | hypothetical protein | - |
| AWC37_RS13830 () | 685519..685686 | + | 168 | WP_155238586.1 | hypothetical protein | - |
| AWC37_RS13970 () | 686067..686183 | + | 117 | WP_158227722.1 | hypothetical protein | - |
| AWC37_RS03360 () | 686869..687117 | + | 249 | WP_029379025.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| AWC37_RS03365 () | 687175..687684 | - | 510 | Protein_676 | IS1182 family transposase ISBpu1 | Transposase |
| AWC37_RS03370 () | 688370..690253 | + | 1884 | WP_081224966.1 | Putative glycosyltransferase EpsH | VF |
| AWC37_RS03375 () | 690766..690900 | + | 135 | WP_037556993.1 | beta-class phenol-soluble modulin | - |
| AWC37_RS03380 () | 690947..691081 | + | 135 | WP_037556990.1 | beta-class phenol-soluble modulin | - |
| AWC37_RS03385 () | 691124..691258 | + | 135 | WP_037556988.1 | beta-class phenol-soluble modulin | - |
| AWC37_RS03390 () | 691312..691446 | + | 135 | WP_037556986.1 | beta-class phenol-soluble modulin | - |
| AWC37_RS03395 () | 691490..691624 | + | 135 | WP_037556984.1 | beta-class phenol-soluble modulin | - |
| AWC37_RS03400 () | 691744..692430 | + | 687 | WP_038678321.1 | YjjG family noncanonical pyrimidine nucleotidase | - |
| AWC37_RS03405 () | 692562..693008 | - | 447 | WP_029377553.1 | N-acetyltransferase | - |
| AWC37_RS03410 () | 693281..694894 | + | 1614 | WP_038678322.1 | bacillithiol biosynthesis cysteine-adding enzyme BshC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|