MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 39331 bp
Accession: NZ_CP013765 Location: 1..39331 Organism: Piscirickettsia salmonis strain PM21567A Replicon: plasmid p3PS2
Accession: NZ_CP013765 Location: 1..39331 Organism: Piscirickettsia salmonis strain PM21567A Replicon: plasmid p3PS2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI49_RS16825 () | 75..1072 | + | 998 | Protein_1 | IS30 family transposase | - |
| AVI49_RS16830 () | 1418..1759 | - | 342 | WP_081007075.1 | MBL fold metallo-hydrolase | - |
| AVI49_RS16835 () | 1823..2413 | - | 591 | WP_032126152.1 | site-specific integrase | - |
| AVI49_RS16840 () | 2629..2823 | + | 195 | WP_032126154.1 | type II toxin-antitoxin system HicA family toxin | - |
| AVI49_RS16845 () | 2834..3298 | + | 465 | WP_016212274.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| AVI49_RS16850 () | 3829..4920 | + | 1092 | WP_054300578.1 | hypothetical protein | - |
| AVI49_RS16855 () | 5146..6120 | + | 975 | WP_054300271.1 | IS30 family transposase | - |
| AVI49_RS16860 () | 6257..6484 | + | 228 | WP_016210972.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| AVI49_RS16865 () | 6493..6900 | + | 408 | WP_016210974.1 | DUF4411 family protein | Toxin Detail |
| AVI49_RS16870 () | 7017..7697 | + | 681 | WP_129556725.1 | DNA/RNA non-specific endonuclease | - |
| AVI49_RS16875 () | 7876..8169 | + | 294 | WP_016210977.1 | zinc ribbon domain-containing protein | - |
| AVI49_RS19130 () | 8169..8447 | + | 279 | WP_032126476.1 | hypothetical protein | - |
| AVI49_RS18810 () | 8714..8893 | - | 180 | WP_155046773.1 | phosphatase | - |
| AVI49_RS16885 () | 8988..9305 | + | 318 | WP_129556723.1 | hypothetical protein | - |
| AVI49_RS16890 () | 9615..9998 | + | 384 | WP_032126134.1 | HNH endonuclease | - |
| AVI49_RS16895 () | 10086..10565 | + | 480 | WP_016212234.1 | P27 family phage terminase small subunit | - |
| AVI49_RS16900 () | 10569..12251 | + | 1683 | WP_054300577.1 | terminase large subunit | - |
| AVI49_RS16905 () | 12270..13331 | - | 1062 | WP_054300392.1 | transposase | - |
| AVI49_RS16910 () | 13403..14644 | + | 1242 | WP_054300593.1 | phage portal protein | - |
| AVI49_RS16915 () | 14607..15263 | + | 657 | WP_054300592.1 | Clp protease ClpP | - |
| AVI49_RS16920 () | 15318..16511 | + | 1194 | WP_054300591.1 | phage major capsid protein | - |
| AVI49_RS16925 () | 16547..17128 | - | 582 | WP_036778347.1 | hypothetical protein | - |
| AVI49_RS16930 () | 17463..17687 | + | 225 | WP_054300590.1 | hypothetical protein | - |
| AVI49_RS16935 () | 17717..18028 | + | 312 | Protein_24 | IS6 family transposase | - |
| AVI49_RS18000 () | 18194..18433 | + | 240 | WP_075275277.1 | transposase zinc-binding domain-containing protein | - |
| AVI49_RS16945 () | 18358..19329 | + | 972 | WP_033923677.1 | IS91 family transposase | - |
| AVI49_RS16950 () | 19641..19904 | - | 264 | WP_032126138.1 | RNA-binding protein | - |
| AVI49_RS16955 () | 20210..21079 | - | 870 | WP_016211383.1 | hypothetical protein | - |
| AVI49_RS16960 () | 21103..22125 | - | 1023 | WP_016211377.1 | AAA family ATPase | - |
| AVI49_RS16965 () | 22886..23911 | + | 1026 | WP_032126388.1 | helix-turn-helix domain-containing protein | - |
| AVI49_RS16970 () | 24024..25256 | + | 1233 | WP_032126623.1 | MFS transporter | - |
| AVI49_RS16975 () | 25433..26407 | - | 975 | WP_054300271.1 | IS30 family transposase | - |
| AVI49_RS16980 () | 26656..26916 | + | 261 | WP_027242955.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| AVI49_RS16985 () | 26909..27262 | + | 354 | WP_036780061.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| AVI49_RS18815 () | 27350..27577 | + | 228 | WP_155047027.1 | hypothetical protein | - |
| AVI49_RS16990 () | 27725..28696 | - | 972 | WP_033923677.1 | IS91 family transposase | - |
| AVI49_RS18005 () | 28621..28920 | - | 300 | WP_075274768.1 | transposase zinc-binding domain-containing protein | - |
| AVI49_RS17000 () | 29175..29633 | + | 459 | WP_054300586.1 | hypothetical protein | - |
| AVI49_RS17005 () | 29808..30779 | - | 972 | WP_033923677.1 | IS91 family transposase | - |
| AVI49_RS18010 () | 30704..31003 | - | 300 | WP_075274768.1 | transposase zinc-binding domain-containing protein | - |
| AVI49_RS17015 () | 31161..32291 | + | 1131 | WP_054300584.1 | hypothetical protein | - |
| AVI49_RS17020 () | 32330..32770 | + | 441 | WP_054300583.1 | thioesterase family protein | - |
| AVI49_RS17025 () | 32778..33323 | + | 546 | WP_054300582.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| AVI49_RS17030 () | 33353..34081 | + | 729 | WP_054300581.1 | IS6 family transposase | - |
| AVI49_RS17035 () | 34147..34785 | + | 639 | Protein_45 | IS6 family transposase | - |
| AVI49_RS17040 () | 34852..35142 | - | 291 | Protein_46 | IS6 family transposase | - |
| AVI49_RS17045 () | 35172..36104 | - | 933 | WP_144420837.1 | hypothetical protein | - |
| AVI49_RS17050 () | 36246..36974 | - | 729 | WP_054300580.1 | IS6 family transposase | - |
| AVI49_RS17055 () | 37004..39076 | - | 2073 | WP_036779013.1 | S9 family peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|