MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 120730 bp
Accession: NZ_CP013763 Location: 1..120730 Organism: Piscirickettsia salmonis strain PM21567A Replicon: plasmid p1PS2
Accession: NZ_CP013763 Location: 1..120730 Organism: Piscirickettsia salmonis strain PM21567A Replicon: plasmid p1PS2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AVI49_RS18710 () | 406..648 | + | 243 | WP_155047010.1 | hypothetical protein | - |
| AVI49_RS17950 () | 793..1509 | + | 717 | WP_081377346.1 | transposase | - |
| AVI49_RS18715 () | 1657..1809 | + | 153 | Protein_2 | site-specific integrase | - |
| AVI49_RS15540 () | 2031..2306 | - | 276 | WP_075278622.1 | hypothetical protein | - |
| AVI49_RS15545 () | 2307..3053 | - | 747 | WP_016211894.1 | AAA family ATPase | - |
| AVI49_RS15550 () | 3562..4620 | + | 1059 | WP_016211895.1 | hypothetical protein | - |
| AVI49_RS15555 () | 4743..5477 | - | 735 | WP_032126360.1 | hypothetical protein | - |
| AVI49_RS15560 () | 5819..6042 | + | 224 | Protein_7 | hypothetical protein | - |
| AVI49_RS15565 () | 6180..6914 | - | 735 | WP_075273741.1 | IS6 family transposase | - |
| AVI49_RS15570 () | 7044..7634 | + | 591 | WP_075273747.1 | reverse transcriptase/maturase family protein | - |
| AVI49_RS15575 () | 7896..8393 | - | 498 | WP_164997281.1 | transposase zinc-binding domain-containing protein | - |
| AVI49_RS18720 () | 8396..8557 | + | 162 | WP_155046767.1 | hypothetical protein | - |
| AVI49_RS15585 () | 8888..9622 | + | 735 | WP_075273741.1 | IS6 family transposase | - |
| AVI49_RS15600 () | 11051..11854 | + | 804 | WP_155047018.1 | IS3 family transposase | - |
| AVI49_RS15605 () | 11890..12189 | - | 300 | WP_075274752.1 | hypothetical protein | - |
| AVI49_RS15610 () | 12186..12761 | - | 576 | WP_075274751.1 | IS630 family transposase | - |
| AVI49_RS15615 () | 12707..13072 | - | 366 | WP_032126362.1 | IS630 transposase-related protein | - |
| AVI49_RS15620 () | 13136..13285 | - | 150 | Protein_18 | IS6 family transposase | - |
| AVI49_RS18725 () | 13586..13714 | - | 129 | Protein_19 | IS6 family transposase | - |
| AVI49_RS15630 () | 13783..14175 | + | 393 | Protein_20 | DDE-type integrase/transposase/recombinase | - |
| AVI49_RS15635 () | 14265..16307 | + | 2043 | WP_016212061.1 | hypothetical protein | - |
| AVI49_RS15640 () | 16527..16847 | - | 321 | Protein_22 | transposase family protein | - |
| AVI49_RS15650 () | 17077..17277 | + | 201 | WP_075274748.1 | transposase zinc-binding domain-containing protein | - |
| AVI49_RS15655 () | 17314..17760 | + | 447 | Protein_24 | IS6 family transposase | - |
| AVI49_RS15660 () | 18049..18330 | + | 282 | Protein_25 | DDE-type integrase/transposase/recombinase | - |
| AVI49_RS15665 () | 18783..18980 | + | 198 | WP_016212579.1 | hypothetical protein | - |
| AVI49_RS15670 () | 19580..20554 | - | 975 | WP_054300271.1 | IS30 family transposase | - |
| AVI49_RS15675 () | 20598..20885 | + | 288 | WP_016212456.1 | type II toxin-antitoxin system HigB family toxin | - |
| AVI49_RS15680 () | 20882..21283 | + | 402 | WP_036779532.1 | helix-turn-helix domain-containing protein | - |
| AVI49_RS15685 () | 21293..23479 | - | 2187 | WP_075273881.1 | ATP-dependent RecD-like DNA helicase | - |
| AVI49_RS15690 () | 23600..23833 | - | 234 | WP_016212404.1 | hypothetical protein | - |
| AVI49_RS15695 () | 23889..24107 | - | 219 | WP_016212407.1 | transposase | - |
| AVI49_RS15700 () | 24610..25344 | + | 735 | WP_075273857.1 | IS6 family transposase | - |
| AVI49_RS15705 () | 25498..26229 | - | 732 | WP_016212311.1 | hypothetical protein | - |
| AVI49_RS15710 () | 26350..27933 | - | 1584 | WP_052047129.1 | protein kinase | - |
| AVI49_RS15715 () | 28216..28485 | - | 270 | Protein_36 | DDE-type integrase/transposase/recombinase | - |
| AVI49_RS18735 () | 28412..28591 | + | 180 | WP_155047017.1 | hypothetical protein | - |
| AVI49_RS15720 () | 28765..29232 | - | 468 | Protein_38 | IS6-like element ISPsa2 family transposase | - |
| AVI49_RS15725 () | 29300..29740 | - | 441 | Protein_39 | tyrosine-type recombinase/integrase | - |
| AVI49_RS15730 () | 29945..30187 | + | 243 | WP_016212365.1 | antidote-toxin recognition MazE family protein | Antitoxin Detail |
| AVI49_RS15735 () | 30189..30515 | + | 327 | WP_036781349.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| AVI49_RS15740 () | 30631..31359 | + | 729 | WP_075273842.1 | IS6 family transposase | - |
| AVI49_RS15745 () | 31829..32212 | + | 384 | WP_016212152.1 | hypothetical protein | - |
| AVI49_RS15750 () | 32519..32896 | - | 378 | WP_016212154.1 | DDE-type integrase/transposase/recombinase | - |
| AVI49_RS15755 () | 33061..33393 | - | 333 | WP_032126739.1 | transposase | - |
| AVI49_RS15765 () | 33582..34361 | - | 780 | WP_081377351.1 | transposase | - |
| AVI49_RS15770 () | 34462..34839 | - | 378 | Protein_47 | DDE-type integrase/transposase/recombinase | - |
| AVI49_RS15775 () | 35175..35870 | + | 696 | WP_016212019.1 | IS6 family transposase | - |
| AVI49_RS15780 () | 36027..36326 | - | 300 | WP_016212018.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AVI49_RS15785 () | 36323..36568 | - | 246 | WP_047927838.1 | hypothetical protein | - |
| AVI49_RS15790 () | 36598..36825 | - | 228 | WP_155047016.1 | hypothetical protein | - |
| AVI49_RS15795 () | 37229..37642 | - | 414 | WP_016212014.1 | DUF2190 family protein | - |
| AVI49_RS15800 () | 37740..38468 | - | 729 | WP_054300202.1 | IS6 family transposase | - |
| AVI49_RS15810 () | 38535..39688 | + | 1154 | WP_105962623.1 | IS3 family transposase | - |
| AVI49_RS18745 () | 39719..39847 | - | 129 | Protein_55 | IS6 family transposase | - |
| AVI49_RS18750 () | 40070..41089 | - | 1020 | WP_129556707.1 | hypothetical protein | - |
| AVI49_RS15820 () | 41404..42327 | - | 924 | WP_052104769.1 | chemotaxis protein | - |
| AVI49_RS15825 () | 43325..43753 | + | 429 | WP_016211886.1 | nucleotidyltransferase substrate binding protein | - |
| AVI49_RS15830 () | 43750..44049 | + | 300 | WP_016211884.1 | nucleotidyltransferase domain-containing protein | - |
| AVI49_RS15835 () | 44140..44769 | + | 630 | WP_129556706.1 | hypothetical protein | - |
| AVI49_RS15840 () | 44783..45823 | + | 1041 | WP_016211885.1 | DNA-binding protein | - |
| AVI49_RS15845 () | 45932..46981 | + | 1050 | WP_033923686.1 | transposase | - |
| AVI49_RS15850 () | 47106..48080 | + | 975 | WP_054300271.1 | IS30 family transposase | - |
| AVI49_RS15855 () | 48144..48458 | + | 315 | WP_016212150.1 | hypothetical protein | - |
| AVI49_RS15860 () | 48482..49444 | + | 963 | WP_016212151.1 | tyrosine-type recombinase/integrase | - |
| AVI49_RS15865 () | 49535..50509 | - | 975 | WP_054300271.1 | IS30 family transposase | - |
| AVI49_RS15870 () | 50704..51146 | - | 443 | Protein_67 | DDE-type integrase/transposase/recombinase | - |
| AVI49_RS15885 () | 52083..52390 | - | 308 | Protein_69 | IS6 family transposase | - |
| AVI49_RS15890 () | 52473..53396 | - | 924 | WP_016212121.1 | ParB/RepB/Spo0J family partition protein | - |
| AVI49_RS15895 () | 53350..54051 | - | 702 | WP_016212122.1 | ParA family protein | - |
| AVI49_RS15900 () | 54249..54700 | + | 452 | Protein_72 | IS6 family transposase | - |
| AVI49_RS17960 () | 54928..55251 | + | 324 | WP_155047015.1 | transposase | - |
| AVI49_RS18755 () | 55632..55799 | - | 168 | WP_168183278.1 | hypothetical protein | - |
| AVI49_RS15915 () | 55750..56664 | + | 915 | Protein_75 | IS30 family transposase | - |
| AVI49_RS15920 () | 56713..57441 | + | 729 | WP_054300202.1 | IS6 family transposase | - |
| AVI49_RS15925 () | 57561..58643 | + | 1083 | WP_054300162.1 | IS481 family transposase | - |
| AVI49_RS15930 () | 58673..59734 | - | 1062 | WP_075273836.1 | hypothetical protein | - |
| AVI49_RS15935 () | 60077..60643 | - | 567 | WP_075273834.1 | hypothetical protein | - |
| AVI49_RS15940 () | 60850..61578 | - | 729 | WP_054300202.1 | IS6 family transposase | - |
| AVI49_RS15945 () | 61734..62075 | + | 342 | WP_155047014.1 | DNA-packaging protein | - |
| AVI49_RS15950 () | 62146..62478 | + | 333 | WP_075273830.1 | hypothetical protein | - |
| AVI49_RS15955 () | 62508..63236 | + | 729 | WP_054300202.1 | IS6 family transposase | - |
| AVI49_RS17965 () | 63260..63415 | + | 156 | WP_155047021.1 | IS3 family transposase | - |
| AVI49_RS15965 () | 63710..66286 | - | 2577 | WP_016211890.1 | hypothetical protein | - |
| AVI49_RS15970 () | 66490..67218 | - | 729 | WP_054300202.1 | IS6 family transposase | - |
| AVI49_RS15975 () | 67248..68417 | - | 1170 | WP_075273828.1 | hypothetical protein | - |
| AVI49_RS15980 () | 68430..69449 | - | 1020 | WP_016211879.1 | ParA family protein | - |
| AVI49_RS15985 () | 70404..70994 | - | 591 | WP_036780064.1 | site-specific integrase | - |
| AVI49_RS17970 () | 71240..72055 | - | 816 | WP_081377350.1 | transposase | - |
| AVI49_RS18760 () | 72385..72531 | - | 147 | WP_155047013.1 | hypothetical protein | - |
| AVI49_RS15995 () | 72752..73879 | + | 1128 | WP_075273826.1 | hypothetical protein | - |
| AVI49_RS16000 () | 73839..74093 | + | 255 | WP_075273824.1 | transposase | - |
| AVI49_RS16005 () | 74097..74672 | - | 576 | WP_075273327.1 | IS630 family transposase | - |
| AVI49_RS16010 () | 74618..74983 | - | 366 | WP_032126362.1 | IS630 transposase-related protein | - |
| AVI49_RS16015 () | 74944..75951 | + | 1008 | WP_155047012.1 | IS3 family transposase | - |
| AVI49_RS16020 () | 76020..76277 | + | 258 | WP_075274741.1 | hypothetical protein | - |
| AVI49_RS16025 () | 76379..76879 | - | 501 | WP_075273822.1 | transposase zinc-binding domain-containing protein | - |
| AVI49_RS16030 () | 77036..78118 | + | 1083 | WP_075273820.1 | IS481 family transposase | - |
| AVI49_RS18765 () | 78305..78475 | - | 171 | WP_016212255.1 | hypothetical protein | - |
| AVI49_RS16035 () | 78472..78675 | - | 204 | WP_032126838.1 | hypothetical protein | - |
| AVI49_RS16040 () | 79012..79236 | - | 225 | WP_016212257.1 | hypothetical protein | - |
| AVI49_RS16045 () | 79256..79528 | - | 273 | WP_016212260.1 | hypothetical protein | - |
| AVI49_RS16050 () | 79686..80660 | + | 975 | WP_054300276.1 | IS30 family transposase | - |
| AVI49_RS16055 () | 80697..81224 | - | 528 | Protein_105 | IS6 family transposase | - |
| AVI49_RS16060 () | 81315..82541 | - | 1227 | WP_129556717.1 | hypothetical protein | - |
| AVI49_RS16065 () | 82867..83703 | - | 837 | WP_075273816.1 | IS30 family transposase | - |
| AVI49_RS16070 () | 83966..84427 | + | 462 | WP_075273814.1 | hypothetical protein | - |
| AVI49_RS16075 () | 84594..84974 | + | 381 | WP_155047268.1 | transposase | - |
| AVI49_RS18770 () | 84977..85054 | - | 78 | Protein_110 | IS6 family transposase | - |
| AVI49_RS16080 () | 85164..85709 | + | 546 | Protein_111 | helix-turn-helix domain-containing protein | - |
| AVI49_RS16085 () | 85775..86140 | + | 366 | WP_032126362.1 | IS630 transposase-related protein | - |
| AVI49_RS16090 () | 86086..86643 | + | 558 | WP_075273812.1 | IS630 family transposase | - |
| AVI49_RS16095 () | 86640..87614 | - | 975 | WP_054300271.1 | IS30 family transposase | - |
| AVI49_RS16100 () | 87751..88287 | + | 537 | Protein_115 | transposase family protein | - |
| AVI49_RS16105 () | 88303..88719 | - | 417 | Protein_116 | IS6 family transposase | - |
| AVI49_RS16120 () | 89924..90631 | - | 708 | WP_075273810.1 | hypothetical protein | - |
| AVI49_RS17975 () | 90939..91688 | + | 750 | WP_081377348.1 | transposase | - |
| AVI49_RS16130 () | 92003..92506 | + | 504 | WP_080728342.1 | helix-turn-helix transcriptional regulator | - |
| AVI49_RS16135 () | 92546..93070 | - | 525 | WP_075273808.1 | hypothetical protein | - |
| AVI49_RS16140 () | 93332..93895 | - | 564 | WP_075273806.1 | transposase | - |
| AVI49_RS16145 () | 94001..94456 | - | 456 | WP_081007004.1 | IS5 family transposase | - |
| AVI49_RS16150 () | 94416..94751 | - | 336 | WP_081377347.1 | transposase | - |
| AVI49_RS16155 () | 94839..95567 | - | 729 | WP_075273802.1 | IS6-like element ISPsa2 family transposase | - |
| AVI49_RS16160 () | 95614..95796 | - | 183 | WP_075273800.1 | hypothetical protein | - |
| AVI49_RS16165 () | 95901..96329 | + | 429 | WP_016212413.1 | hypothetical protein | - |
| AVI49_RS16170 () | 96377..97117 | + | 741 | WP_033923775.1 | SDR family oxidoreductase | - |
| AVI49_RS16185 () | 97851..98375 | - | 525 | WP_051307367.1 | hypothetical protein | - |
| AVI49_RS16190 () | 98495..99298 | - | 804 | WP_075273796.1 | hypothetical protein | - |
| AVI49_RS16195 () | 99853..100116 | - | 264 | WP_032126138.1 | RNA-binding protein | - |
| AVI49_RS16205 () | 100682..101017 | - | 336 | WP_016211871.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| AVI49_RS16210 () | 101011..101211 | - | 201 | WP_129556699.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| AVI49_RS16215 () | 101519..101743 | + | 225 | WP_054300590.1 | hypothetical protein | - |
| AVI49_RS16220 () | 101773..102084 | + | 312 | Protein_135 | IS6 family transposase | - |
| AVI49_RS17980 () | 102250..102489 | + | 240 | WP_075275277.1 | transposase zinc-binding domain-containing protein | - |
| AVI49_RS16230 () | 102414..103385 | + | 972 | WP_033923677.1 | IS91 family transposase | - |
| AVI49_RS16235 () | 103542..103961 | + | 420 | Protein_138 | DDE-type integrase/transposase/recombinase | - |
| AVI49_RS16240 () | 103930..104232 | - | 303 | WP_075273790.1 | hypothetical protein | - |
| AVI49_RS16245 () | 104222..104743 | - | 522 | WP_155049901.1 | hypothetical protein | - |
| AVI49_RS18780 () | 105149..105313 | - | 165 | WP_016212412.1 | hypothetical protein | - |
| AVI49_RS16250 () | 105306..105755 | - | 450 | WP_016212408.1 | hypothetical protein | - |
| AVI49_RS18785 () | 106003..106176 | + | 174 | WP_016212410.1 | hypothetical protein | - |
| AVI49_RS18790 () | 106179..106373 | - | 195 | Protein_144 | IS6 family transposase | - |
| AVI49_RS16260 () | 106381..106755 | - | 375 | WP_016212499.1 | hypothetical protein | - |
| AVI49_RS16265 () | 107092..107694 | - | 603 | Protein_146 | IS30 family transposase | - |
| AVI49_RS16275 () | 107754..108907 | + | 1154 | WP_105962623.1 | IS3 family transposase | - |
| AVI49_RS16280 () | 108916..109314 | - | 399 | WP_075273786.1 | helix-turn-helix domain-containing protein | - |
| AVI49_RS16285 () | 109747..110868 | + | 1122 | WP_016211913.1 | hypothetical protein | - |
| AVI49_RS16290 () | 111194..111466 | - | 273 | WP_016211910.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| AVI49_RS16295 () | 111470..111730 | - | 261 | WP_032126795.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AVI49_RS19110 () | 112030..112218 | - | 189 | WP_155053508.1 | hypothetical protein | - |
| AVI49_RS16305 () | 112453..112881 | + | 429 | WP_075273782.1 | site-specific integrase | - |
| AVI49_RS17985 () | 113151..113390 | + | 240 | WP_075275277.1 | transposase zinc-binding domain-containing protein | - |
| AVI49_RS16315 () | 113315..114286 | + | 972 | WP_033923677.1 | IS91 family transposase | - |
| AVI49_RS16320 () | 114425..115132 | + | 708 | WP_075273780.1 | IS6 family transposase | - |
| AVI49_RS16335 () | 116409..116885 | - | 477 | WP_051307374.1 | Clp protease ClpP | - |
| AVI49_RS16340 () | 117126..117452 | + | 327 | WP_016212298.1 | hypothetical protein | - |
| AVI49_RS17990 () | 117622..117861 | + | 240 | WP_075275277.1 | transposase zinc-binding domain-containing protein | - |
| AVI49_RS16350 () | 117786..118757 | + | 972 | WP_033923677.1 | IS91 family transposase | - |
| AVI49_RS17995 () | 119469..119708 | + | 240 | WP_075275277.1 | transposase zinc-binding domain-containing protein | - |
| AVI49_RS16360 () | 119633..120604 | + | 972 | WP_033923677.1 | IS91 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|