MGE detailed information
MGE type: Prophage MGE length: 62628 bp
Accession: NZ_CP013616 Location: 1530962..1593589 Organism: Staphylococcus aureus strain RIVM1295 Replicon: chromosome
Accession: NZ_CP013616 Location: 1530962..1593589 Organism: Staphylococcus aureus strain RIVM1295 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AUC48_RS07285 () | 1526301..1526549 | + | 249 | WP_001151997.1 | ferredoxin | - |
| AUC48_RS07290 () | 1526655..1527200 | - | 546 | WP_001186909.1 | ECF transporter S component | - |
| AUC48_RS07295 () | 1527604..1528536 | - | 933 | WP_001825312.1 | DUF1672 domain-containing protein | - |
| AUC48_RS07305 () | 1528991..1529887 | - | 897 | WP_001807840.1 | DUF1672 domain-containing protein | - |
| AUC48_RS07310 () | 1529942..1530871 | - | 930 | WP_001825313.1 | DUF1672 domain-containing protein | - |
| AUC48_RS14805 () | 1530962..1531177 | - | 216 | WP_170267452.1 | hypothetical protein | - |
| AUC48_RS07320 () | 1531555..1532391 | - | 837 | WP_000675478.1 | hypothetical protein | - |
| AUC48_RS07330 () | 1533007..1534461 | - | 1455 | WP_031912154.1 | N-acetylmuramoyl-L-alanine amidase | - |
| AUC48_RS07335 () | 1534472..1534774 | - | 303 | WP_000339144.1 | phage holin | - |
| AUC48_RS07340 () | 1534910..1535209 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| AUC48_RS07345 () | 1535255..1535419 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| AUC48_RS07350 () | 1535412..1535801 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| AUC48_RS07355 () | 1535801..1537267 | - | 1467 | WP_031775142.1 | BppU family phage baseplate upper protein | - |
| AUC48_RS07360 () | 1537267..1539177 | - | 1911 | WP_000429551.1 | minor structural protein | - |
| AUC48_RS07365 () | 1539193..1539483 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| AUC48_RS07370 () | 1539483..1541066 | - | 1584 | WP_016187454.1 | prophage endopeptidase tail family protein | - |
| AUC48_RS07375 () | 1541075..1541899 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| AUC48_RS07380 () | 1541899..1548099 | - | 6201 | WP_060578199.1 | phage tail tape measure protein | - |
| AUC48_RS07385 () | 1548113..1548271 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| AUC48_RS07390 () | 1548313..1548663 | - | 351 | WP_000589165.1 | hypothetical protein | - |
| AUC48_RS07395 () | 1548721..1549176 | - | 456 | WP_000169128.1 | Ig domain-containing protein | - |
| AUC48_RS07400 () | 1549268..1549909 | - | 642 | WP_000807536.1 | tail protein | - |
| AUC48_RS07405 () | 1549944..1550339 | - | 396 | WP_001023808.1 | DUF3168 domain-containing protein | - |
| AUC48_RS07410 () | 1550340..1550741 | - | 402 | WP_000110019.1 | hypothetical protein | - |
| AUC48_RS07415 () | 1550738..1551070 | - | 333 | WP_000395499.1 | hypothetical protein | - |
| AUC48_RS07420 () | 1551082..1551360 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| AUC48_RS07425 () | 1551429..1552592 | - | 1164 | WP_031776039.1 | phage major capsid protein | - |
| AUC48_RS07430 () | 1552604..1553377 | - | 774 | WP_031775146.1 | Clp protease ClpP | - |
| AUC48_RS07435 () | 1553361..1554599 | - | 1239 | WP_001100669.1 | phage portal protein | - |
| AUC48_RS07440 () | 1554604..1556295 | - | 1692 | WP_015974521.1 | terminase large subunit | - |
| AUC48_RS07445 () | 1556285..1556590 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| AUC48_RS07450 () | 1556718..1557032 | - | 315 | WP_031775147.1 | HNH endonuclease | - |
| AUC48_RS07455 () | 1557189..1557626 | - | 438 | WP_015986202.1 | hypothetical protein | - |
| AUC48_RS07460 () | 1557639..1557821 | - | 183 | Protein_1426 | ATP-dependent helicase | - |
| AUC48_RS07465 () | 1557749..1558195 | - | 447 | Protein_1427 | hypothetical protein | - |
| AUC48_RS07470 () | 1558247..1558447 | - | 201 | WP_031838374.1 | DUF1514 family protein | - |
| AUC48_RS07475 () | 1558515..1558667 | - | 153 | WP_031838395.1 | transcriptional regulator | - |
| AUC48_RS07480 () | 1558667..1559053 | - | 387 | WP_001555739.1 | hypothetical protein | - |
| AUC48_RS07485 () | 1559043..1559279 | - | 237 | WP_031766068.1 | hypothetical protein | - |
| AUC48_RS07490 () | 1559304..1559540 | - | 237 | WP_000195831.1 | DUF1381 domain-containing protein | - |
| AUC48_RS07495 () | 1559577..1560119 | - | 543 | WP_031838396.1 | dUTP pyrophosphatase | - |
| AUC48_RS07500 () | 1560124..1560360 | - | 237 | WP_001065023.1 | DUF1024 family protein | - |
| AUC48_RS07505 () | 1560353..1560661 | - | 309 | WP_000144708.1 | hypothetical protein | - |
| AUC48_RS07510 () | 1560658..1561005 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| AUC48_RS07515 () | 1561002..1561403 | - | 402 | WP_031796932.1 | hypothetical protein | - |
| AUC48_RS07520 () | 1561406..1561612 | - | 207 | WP_000693987.1 | hypothetical protein | - |
| AUC48_RS07525 () | 1561626..1561874 | - | 249 | WP_031796934.1 | phi PVL orf 51-like protein | - |
| AUC48_RS07530 () | 1561875..1562234 | - | 360 | WP_031838377.1 | phage protein | - |
| AUC48_RS07535 () | 1562235..1562420 | - | 186 | WP_031838378.1 | DUF3113 family protein | - |
| AUC48_RS07540 () | 1562425..1562829 | - | 405 | WP_000049798.1 | DUF1064 domain-containing protein | - |
| AUC48_RS07545 () | 1562840..1563061 | - | 222 | WP_001123688.1 | DUF3269 family protein | - |
| AUC48_RS07550 () | 1563065..1563280 | - | 216 | WP_001024405.1 | hypothetical protein | - |
| AUC48_RS07555 () | 1563277..1564518 | - | 1242 | WP_001106166.1 | AAA family ATPase | - |
| AUC48_RS07560 () | 1564515..1564871 | - | 357 | WP_001132243.1 | hypothetical protein | - |
| AUC48_RS07565 () | 1564871..1565626 | - | 756 | WP_001037657.1 | DnaD domain protein | - |
| AUC48_RS07570 () | 1565619..1566290 | - | 672 | WP_031838379.1 | phi PV83 orf 19-like protein | - |
| AUC48_RS07575 () | 1566303..1566857 | - | 555 | WP_000704713.1 | single-stranded DNA-binding protein | - |
| AUC48_RS07580 () | 1566887..1567666 | - | 780 | WP_000137071.1 | ATP-binding protein | - |
| AUC48_RS07585 () | 1567667..1568203 | - | 537 | WP_000999048.1 | host-nuclease inhibitor Gam family protein | - |
| AUC48_RS07590 () | 1568216..1568476 | - | 261 | WP_000291481.1 | DUF1108 family protein | - |
| AUC48_RS07595 () | 1568481..1568783 | - | 303 | WP_031838380.1 | DUF2482 family protein | - |
| AUC48_RS07600 () | 1568848..1569162 | - | 315 | WP_031838381.1 | hypothetical protein | - |
| AUC48_RS07605 () | 1569167..1569337 | - | 171 | WP_031838382.1 | DUF1270 domain-containing protein | - |
| AUC48_RS07610 () | 1569350..1569613 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| AUC48_RS07615 () | 1569638..1569853 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| AUC48_RS07620 () | 1569908..1570273 | + | 366 | WP_016170627.1 | hypothetical protein | Antitoxin Detail |
| AUC48_RS07625 () | 1570242..1570487 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| AUC48_RS07630 () | 1570543..1570752 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| AUC48_RS07635 () | 1570742..1570885 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| AUC48_RS07640 () | 1570956..1571168 | + | 213 | WP_000362644.1 | hypothetical protein | - |
| AUC48_RS14810 () | 1571209..1571358 | - | 150 | WP_000771849.1 | hypothetical protein | - |
| AUC48_RS07645 () | 1571373..1571816 | - | 444 | WP_000435362.1 | hypothetical protein | - |
| AUC48_RS07650 () | 1571829..1572077 | - | 249 | WP_000272859.1 | helix-turn-helix domain-containing protein | - |
| AUC48_RS07655 () | 1572241..1572564 | + | 324 | WP_001260487.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| AUC48_RS07660 () | 1572577..1573038 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| AUC48_RS07665 () | 1573056..1573640 | + | 585 | WP_000825948.1 | hypothetical protein | - |
| AUC48_RS07670 () | 1573870..1574016 | + | 147 | WP_001795334.1 | hypothetical protein | - |
| AUC48_RS07675 () | 1574013..1574627 | - | 615 | WP_000191464.1 | hypothetical protein | - |
| AUC48_RS07680 () | 1574753..1575958 | + | 1206 | WP_031585161.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| AUC48_RS07685 () | 1576001..1578028 | - | 2028 | WP_060578201.1 | hypothetical protein | - |
| AUC48_RS07690 () | 1578021..1578950 | - | 930 | WP_001825329.1 | DUF1672 domain-containing protein | - |
| AUC48_RS07695 () | 1579195..1580946 | - | 1752 | WP_000987760.1 | two-component system sensor histidine kinase SrrB | - |
| AUC48_RS07700 () | 1580927..1581652 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| AUC48_RS07705 () | 1581785..1582522 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| AUC48_RS07710 () | 1582515..1583057 | - | 543 | WP_000368650.1 | SMC-Scp complex subunit ScpB | - |
| AUC48_RS07715 () | 1583050..1583781 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| AUC48_RS07720 () | 1583873..1584379 | + | 507 | WP_001183432.1 | DUF309 domain-containing protein | - |
| AUC48_RS07725 () | 1584457..1585344 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| AUC48_RS07730 () | 1585393..1585842 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| AUC48_RS07735 () | 1585947..1586489 | - | 543 | WP_000365235.1 | NUDIX hydrolase | - |
| AUC48_RS07740 () | 1586571..1587479 | + | 909 | WP_001171344.1 | aldo/keto reductase | - |
| AUC48_RS07745 () | 1587695..1587943 | - | 249 | WP_000995803.1 | hypothetical protein | - |
| AUC48_RS07750 () | 1587959..1588714 | - | 756 | WP_000678222.1 | SDR family oxidoreductase | - |
| AUC48_RS07755 () | 1588856..1589671 | + | 816 | WP_000779748.1 | pyrroline-5-carboxylate reductase | - |
| AUC48_RS07760 () | 1589776..1590696 | - | 921 | WP_000454060.1 | ribonuclease Z | - |
| AUC48_RS07765 () | 1591009..1592493 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| AUC48_RS07770 () | 1592723..1593589 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
| AUC48_RS07775 () | 1593672..1595321 | - | 1650 | WP_001041929.1 | alpha-glucosidase | - |
| AUC48_RS07780 () | 1595337..1596356 | - | 1020 | WP_000256335.1 | LacI family DNA-binding transcriptional regulator | - |
| AUC48_RS07785 () | 1596357..1596611 | - | 255 | WP_072434728.1 | hypothetical protein | - |
| AUC48_RS07790 () | 1596550..1596921 | - | 372 | WP_000413439.1 | VOC family protein | - |
| AUC48_RS07795 () | 1597140..1598546 | - | 1407 | WP_000193707.1 | NADP-dependent phosphogluconate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|