MGE detailed information
MGE type: Prophage MGE length: 56909 bp
Accession: NZ_CP012976 Location: 1959419..2016327 Organism: Staphylococcus aureus strain ST20130942 Replicon: chromosome
Accession: NZ_CP012976 Location: 1959419..2016327 Organism: Staphylococcus aureus strain ST20130942 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAST42_RS09710 () | 1955924..1956214 | - | 291 | WP_001792929.1 | MAP domain-containing protein | - |
| SAST42_RS09715 () | 1956225..1957658 | - | 1434 | WP_001804879.1 | extracellular adherence protein Eap/Map | - |
| SAST42_RS09720 () | 1958044..1958294 | + | 251 | Protein_1834 | sphingomyelin phosphodiesterase | - |
| SAST42_RS09725 () | 1958616..1958795 | + | 180 | WP_000669789.1 | hypothetical protein | - |
| SAST42_RS09735 () | 1959106..1959366 | + | 261 | WP_001791826.1 | hypothetical protein | - |
| SAST42_RS09740 () | 1959419..1959769 | - | 351 | WP_000702262.1 | Staphylococcal complement inhibitor | VF |
| SAST42_RS09745 () | 1960450..1960899 | + | 450 | WP_000727643.1 | Chemotaxis inhibitory protein | VF |
| SAST42_RS14695 () | 1960994..1961329 | - | 336 | Protein_1839 | SH3 domain-containing protein | - |
| SAST42_RS09755 () | 1961979..1962470 | - | 492 | WP_000920037.1 | Staphylokinase | VF |
| SAST42_RS09760 () | 1962661..1963416 | - | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| SAST42_RS09765 () | 1963428..1963682 | - | 255 | WP_000611512.1 | phage holin | - |
| SAST42_RS09770 () | 1963734..1963841 | + | 108 | WP_001791821.1 | hypothetical protein | - |
| - () | 1963763..1963902 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1963763..1963902 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1963763..1963902 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1963763..1963902 | + | 140 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1963771..1963826 | + | 56 | - | - | Antitoxin Detail |
| SAST42_RS14380 () | 1963894..1964070 | - | 177 | WP_011447039.1 | putative holin-like toxin | Toxin Detail |
| SAST42_RS09775 () | 1964220..1964516 | - | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| SAST42_RS09780 () | 1964574..1964861 | - | 288 | WP_062909805.1 | hypothetical protein | - |
| SAST42_RS09785 () | 1964908..1965060 | - | 153 | WP_001153681.1 | hypothetical protein | - |
| SAST42_RS09790 () | 1965050..1968835 | - | 3786 | WP_000582137.1 | hypothetical protein | - |
| SAST42_RS09795 () | 1968851..1970341 | - | 1491 | WP_029549971.1 | phage tail family protein | - |
| SAST42_RS09800 () | 1970341..1974993 | - | 4653 | WP_001133528.1 | phage tail tape measure protein | - |
| SAST42_RS09805 () | 1975049..1975171 | - | 123 | WP_000570353.1 | hypothetical protein | - |
| SAST42_RS09810 () | 1975231..1975677 | - | 447 | WP_000442601.1 | hypothetical protein | - |
| SAST42_RS09815 () | 1975742..1976695 | - | 954 | WP_000570652.1 | Ig-like domain-containing protein | - |
| SAST42_RS09820 () | 1976696..1977076 | - | 381 | WP_000611452.1 | hypothetical protein | - |
| SAST42_RS09825 () | 1977073..1977450 | - | 378 | WP_000501244.1 | HK97 gp10 family phage protein | - |
| SAST42_RS09830 () | 1977450..1977785 | - | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| SAST42_RS09835 () | 1977772..1978104 | - | 333 | WP_001177486.1 | head-tail connector protein | - |
| SAST42_RS09840 () | 1978113..1978271 | - | 159 | WP_001252099.1 | hypothetical protein | - |
| SAST42_RS09845 () | 1978307..1979554 | - | 1248 | WP_000849950.1 | phage major capsid protein | - |
| SAST42_RS09850 () | 1979642..1980226 | - | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| SAST42_RS09855 () | 1980219..1981469 | - | 1251 | WP_000511067.1 | phage portal protein | - |
| SAST42_RS09860 () | 1981475..1981675 | - | 201 | WP_000365300.1 | hypothetical protein | - |
| SAST42_RS09865 () | 1981689..1983383 | - | 1695 | WP_000133304.1 | phage terminase large subunit | - |
| SAST42_RS09870 () | 1983386..1983853 | - | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| SAST42_RS09875 () | 1983983..1984327 | - | 345 | WP_000817289.1 | HNH endonuclease | - |
| SAST42_RS09880 () | 1984343..1984795 | - | 453 | WP_000406194.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| SAST42_RS09885 () | 1984910..1985380 | - | 471 | WP_000282748.1 | hypothetical protein | - |
| SAST42_RS09895 () | 1985403..1985603 | - | 201 | WP_001794311.1 | DUF1514 family protein | - |
| SAST42_RS09900 () | 1985603..1985752 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| SAST42_RS09905 () | 1985749..1985955 | - | 207 | WP_000195759.1 | DUF1381 domain-containing protein | - |
| SAST42_RS09910 () | 1985972..1986145 | - | 174 | WP_001209216.1 | hypothetical protein | - |
| SAST42_RS09915 () | 1986182..1986718 | - | 537 | WP_001066448.1 | dUTP diphosphatase | - |
| SAST42_RS09920 () | 1986711..1986881 | - | 171 | WP_000714407.1 | hypothetical protein | - |
| SAST42_RS09925 () | 1986868..1987122 | - | 255 | WP_001065078.1 | DUF1024 family protein | - |
| SAST42_RS09930 () | 1987115..1987504 | - | 390 | WP_000219085.1 | acetyltransferase | - |
| SAST42_RS09935 () | 1987501..1987848 | - | 348 | WP_000982695.1 | hypothetical protein | - |
| SAST42_RS09940 () | 1987912..1988160 | - | 249 | WP_001126839.1 | phi PVL orf 51-like protein | - |
| SAST42_RS09945 () | 1988161..1988532 | - | 372 | WP_001029545.1 | hypothetical protein | - |
| SAST42_RS09950 () | 1988533..1988718 | - | 186 | WP_001187234.1 | DUF3113 family protein | - |
| SAST42_RS09955 () | 1988723..1989127 | - | 405 | WP_000049804.1 | DUF1064 domain-containing protein | - |
| SAST42_RS09960 () | 1989138..1989359 | - | 222 | WP_001123674.1 | DUF3269 family protein | - |
| SAST42_RS09965 () | 1989372..1989530 | - | 159 | WP_000256589.1 | hypothetical protein | - |
| SAST42_RS09970 () | 1989524..1990303 | - | 780 | WP_000803062.1 | ATP-binding protein | - |
| SAST42_RS09975 () | 1990313..1991083 | - | 771 | WP_000190253.1 | conserved phage C-terminal domain-containing protein | - |
| SAST42_RS09980 () | 1991149..1991430 | + | 282 | WP_000414755.1 | hypothetical protein | - |
| SAST42_RS14765 () | 1991423..1991572 | - | 150 | WP_001081076.1 | hypothetical protein | - |
| SAST42_RS09985 () | 1991569..1992240 | - | 672 | WP_001199416.1 | hypothetical protein | - |
| SAST42_RS09990 () | 1992253..1992804 | - | 552 | WP_000704705.1 | single-stranded DNA-binding protein | - |
| SAST42_RS09995 () | 1992835..1993614 | - | 780 | WP_000137070.1 | ATP-binding protein | - |
| SAST42_RS10000 () | 1993607..1993828 | - | 222 | WP_000815404.1 | DUF2483 domain-containing protein | - |
| SAST42_RS10005 () | 1993838..1994098 | - | 261 | WP_000291489.1 | hypothetical protein ; Integrase | Integrase |
| SAST42_RS10010 () | 1994191..1994352 | - | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| SAST42_RS10015 () | 1994349..1994669 | - | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| SAST42_RS10020 () | 1994728..1995360 | + | 633 | WP_000275058.1 | hypothetical protein | - |
| SAST42_RS10025 () | 1995375..1995515 | - | 141 | WP_000939496.1 | hypothetical protein | - |
| SAST42_RS10030 () | 1995546..1995743 | - | 198 | WP_001148861.1 | hypothetical protein | - |
| SAST42_RS10035 () | 1995759..1996508 | - | 750 | WP_001148337.1 | phage antirepressor KilAC domain-containing protein | - |
| SAST42_RS10040 () | 1996565..1997104 | + | 540 | WP_000351243.1 | hypothetical protein | - |
| SAST42_RS10045 () | 1997128..1997388 | - | 261 | WP_000435341.1 | transcriptional regulator | - |
| SAST42_RS10050 () | 1997401..1998198 | - | 798 | WP_001148572.1 | phage antirepressor Ant | - |
| SAST42_RS10055 () | 1998355..1998663 | - | 309 | WP_001153965.1 | hypothetical protein | - |
| SAST42_RS10060 () | 1998678..1998896 | - | 219 | WP_001198673.1 | helix-turn-helix domain-containing protein | - |
| SAST42_RS10065 () | 1999038..1999757 | + | 720 | WP_062909806.1 | XRE family transcriptional regulator | - |
| SAST42_RS10070 () | 1999957..2000139 | + | 183 | WP_000694772.1 | hypothetical protein | - |
| SAST42_RS10075 () | 2000175..2000321 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| SAST42_RS10080 () | 2000318..2000932 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| SAST42_RS10085 () | 2001040..2002077 | + | 1038 | WP_043951427.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| SAST42_RS10090 () | 2002128..2002958 | + | 831 | Protein_1908 | Phospholipase C | VF |
| SAST42_RS10095 () | 2003459..2004475 | - | 1017 | WP_000595401.1 | putative leukocidin-like protein 1 | VF |
| SAST42_RS10100 () | 2004497..2005549 | - | 1053 | WP_000791404.1 | putative leukocidin-like protein 2 | VF |
| SAST42_RS10105 () | 2005985..2007208 | + | 1224 | WP_000206635.1 | ArgE/DapE family deacylase | - |
| SAST42_RS10110 () | 2007581..2008426 | - | 846 | WP_000812008.1 | class I SAM-dependent methyltransferase | - |
| SAST42_RS10115 () | 2008488..2009399 | - | 912 | WP_000825510.1 | Iron(3+)-hydroxamate-binding protein FhuD | VF |
| SAST42_RS10120 () | 2009560..2010867 | + | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| SAST42_RS10125 () | 2011403..2013019 | - | 1617 | WP_000240642.1 | 60 kDa chaperonin | VF |
| SAST42_RS10130 () | 2013095..2013379 | - | 285 | WP_000917289.1 | co-chaperone GroES | - |
| SAST42_RS10135 () | 2013555..2014298 | + | 744 | WP_000197635.1 | CPBP family intramembrane metalloprotease | - |
| SAST42_RS10140 () | 2014323..2015504 | - | 1182 | WP_062909807.1 | hypothetical protein | VF |
| SAST42_RS10145 () | 2015701..2016327 | + | 627 | WP_000522384.1 | nitroreductase family protein | - |
| SAST42_RS10150 () | 2016688..2017473 | + | 786 | WP_000867952.1 | carbon-nitrogen family hydrolase | - |
| SAST42_RS10155 () | 2018072..2018206 | - | 135 | WP_001549197.1 | delta-lysin family phenol-soluble modulin | - |
| SAST42_RS10160 () | 2018442..2019011 | + | 570 | WP_001105707.1 | accessory gene regulator AgrB | - |
| SAST42_RS10165 () | 2019008..2019148 | + | 141 | WP_001093929.1 | cyclic lactone autoinducer peptide | - |
| SAST42_RS10170 () | 2019173..2020465 | + | 1293 | WP_062909808.1 | GHKL domain-containing protein | - |
| SAST42_RS10175 () | 2020484..2021200 | + | 717 | WP_000688498.1 | LytTR family DNA-binding domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus NCTC 8325 | Prophage | TA21487 | NC_007795 | 2033113..2088736 | 0.007 |