MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 57300 bp
Accession: NZ_CP012911 Location: 968950..1026249 Organism: Streptococcus suis strain NSUI060 Replicon: chromosome
Accession: NZ_CP012911 Location: 968950..1026249 Organism: Streptococcus suis strain NSUI060 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APQ97_RS04710 () | 964504..965508 | - | 1005 | WP_002935036.1 | winged helix DNA-binding domain-containing protein | - |
| APQ97_RS04715 () | 965573..966409 | - | 837 | WP_002935037.1 | AraC family transcriptional regulator | - |
| APQ97_RS04720 () | 966486..967820 | - | 1335 | WP_002935038.1 | methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO | - |
| APQ97_RS04725 () | 968016..968765 | - | 750 | WP_002935039.1 | HAD family hydrolase | - |
| APQ97_RS04730 () | 968950..970149 | - | 1200 | WP_002935040.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| APQ97_RS04735 () | 970172..970399 | - | 228 | WP_001258320.1 | DUF3173 family protein | - |
| APQ97_RS04740 () | 970677..970901 | - | 225 | WP_002935042.1 | helix-turn-helix domain-containing protein | - |
| APQ97_RS04745 () | 971067..971801 | - | 735 | WP_002935043.1 | ABC transporter permease | - |
| APQ97_RS04750 () | 971785..972549 | - | 765 | WP_002935044.1 | ABC transporter permease | - |
| APQ97_RS04755 () | 972551..973459 | - | 909 | WP_002935046.1 | putative multidrug ABC transporter ATP-binding protein YbhF | VF |
| APQ97_RS04760 () | 973569..974627 | - | 1059 | Protein_902 | ATP-binding cassette domain-containing protein | - |
| APQ97_RS04765 () | 974696..974851 | - | 156 | WP_002935048.1 | type A2 lantipeptide | - |
| APQ97_RS04770 () | 974880..975035 | - | 156 | WP_002935049.1 | type A2 lantipeptide | - |
| APQ97_RS04775 () | 975390..976088 | + | 699 | WP_002935052.1 | Sensory transduction protein regX3 | VF |
| APQ97_RS04780 () | 976104..977459 | + | 1356 | WP_002935054.1 | HAMP domain-containing histidine kinase | - |
| APQ97_RS04785 () | 977582..979441 | - | 1860 | WP_002935056.1 | relaxase/mobilization nuclease domain-containing protein | - |
| APQ97_RS04790 () | 979428..979793 | - | 366 | WP_002935058.1 | MobC family plasmid mobilization relaxosome protein | - |
| APQ97_RS04795 () | 979803..980162 | - | 360 | WP_002935059.1 | hypothetical protein | - |
| APQ97_RS04800 () | 980497..983004 | - | 2508 | WP_053866460.1 | AAA family ATPase | - |
| APQ97_RS04805 () | 983040..983807 | - | 768 | WP_002935066.1 | zeta toxin family protein | Toxin Detail |
| APQ97_RS04810 () | 983807..984283 | - | 477 | WP_002935067.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| APQ97_RS04815 () | 984353..984643 | - | 291 | WP_002935069.1 | hypothetical protein | - |
| APQ97_RS04820 () | 984693..985082 | - | 390 | WP_002935071.1 | hypothetical protein | - |
| APQ97_RS04825 () | 985079..985306 | - | 228 | WP_002935073.1 | hypothetical protein | - |
| APQ97_RS04830 () | 985360..986436 | - | 1077 | WP_002935075.1 | toprim domain-containing protein | - |
| APQ97_RS04835 () | 986499..988355 | - | 1857 | WP_001820670.1 | IS607 family transposase ISNma20 | Transposase |
| APQ97_RS04840 () | 988410..988601 | - | 192 | WP_001820669.1 | hypothetical protein | - |
| APQ97_RS04845 () | 988673..988903 | - | 231 | WP_001206986.1 | hypothetical protein | - |
| APQ97_RS04850 () | 988949..989803 | - | 855 | WP_000743700.1 | ParB/RepB/Spo0J family partition protein | - |
| APQ97_RS04855 () | 989812..990777 | - | 966 | WP_001820668.1 | plasmid recombination protein | - |
| APQ97_RS04860 () | 991302..992327 | - | 1026 | WP_001170964.1 | AAA family ATPase | - |
| APQ97_RS12265 () | 992498..992956 | - | 459 | Protein_923 | sigma-70 family RNA polymerase sigma factor | - |
| APQ97_RS04870 () | 993040..993465 | - | 426 | WP_000323895.1 | sigma-70 family RNA polymerase sigma factor | - |
| APQ97_RS04875 () | 993560..994072 | - | 513 | WP_000241709.1 | sigma-70 family RNA polymerase sigma factor | - |
| APQ97_RS11845 () | 994560..994733 | - | 174 | WP_002779755.1 | cysteine-rich KTR domain-containing protein | - |
| APQ97_RS04880 () | 994785..996704 | - | 1920 | WP_000691758.1 | Tetracycline resistance protein TetO | VF |
| APQ97_RS04885 () | 997076..997450 | - | 375 | WP_001129922.1 | TnpV protein | - |
| APQ97_RS04890 () | 997390..998121 | - | 732 | WP_002935082.1 | hypothetical protein | - |
| APQ97_RS04895 () | 998217..998507 | - | 291 | WP_002935084.1 | hypothetical protein | - |
| APQ97_RS04900 () | 998521..998820 | - | 300 | WP_024401832.1 | hypothetical protein | - |
| APQ97_RS04905 () | 998891..1000234 | - | 1344 | WP_024401833.1 | helicase C-terminal domain-containing protein | - |
| APQ97_RS04910 () | 1000372..1002150 | - | 1779 | WP_024402041.1 | reverse transcriptase/maturase family protein | - |
| APQ97_RS04915 () | 1002648..1008110 | - | 5463 | WP_061286114.1 | DEAD/DEAH box helicase family protein | - |
| APQ97_RS04920 () | 1008160..1008711 | - | 552 | WP_024401252.1 | hypothetical protein | - |
| APQ97_RS04925 () | 1008695..1008886 | - | 192 | WP_001068447.1 | hypothetical protein | - |
| APQ97_RS04930 () | 1008887..1013782 | - | 4896 | WP_024412541.1 | Agglutinin receptor | VF |
| APQ97_RS04935 () | 1014063..1014653 | + | 591 | WP_024401254.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| APQ97_RS04940 () | 1014650..1015495 | + | 846 | WP_024383472.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| APQ97_RS04945 () | 1015557..1018358 | - | 2802 | WP_061286116.1 | CHAP domain-containing protein | - |
| APQ97_RS04950 () | 1018360..1020711 | - | 2352 | WP_029743459.1 | ATPase AAA | - |
| APQ97_RS04955 () | 1020668..1021021 | - | 354 | WP_024381325.1 | PrgI family protein | - |
| APQ97_RS04960 () | 1021083..1021937 | - | 855 | WP_024401257.1 | conjugal transfer protein TrbL | - |
| APQ97_RS04965 () | 1021955..1022197 | - | 243 | WP_001072182.1 | hypothetical protein | - |
| APQ97_RS04970 () | 1022215..1024032 | - | 1818 | WP_024381326.1 | type IV secretory system conjugative DNA transfer family protein | - |
| APQ97_RS04975 () | 1024032..1024520 | - | 489 | WP_002936460.1 | hypothetical protein | - |
| APQ97_RS04980 () | 1024598..1025182 | - | 585 | WP_053866449.1 | CPBP family intramembrane metalloprotease | - |
| APQ97_RS04985 () | 1025185..1025418 | - | 234 | WP_014636637.1 | hypothetical protein | - |
| APQ97_RS04990 () | 1025427..1025810 | - | 384 | WP_053866448.1 | arsenate reductase | - |
| APQ97_RS04995 () | 1025821..1026249 | - | 429 | WP_053866447.1 | hypothetical protein | - |
| APQ97_RS05000 () | 1026233..1027588 | - | 1356 | WP_053866446.1 | DNA (cytosine-5-)-methyltransferase | - |
| APQ97_RS05005 () | 1027737..1028555 | - | 819 | WP_024401260.1 | replication initiator protein A | - |
| APQ97_RS12530 () | 1028558..1028725 | - | 168 | WP_032499127.1 | hypothetical protein | - |
| APQ97_RS05015 () | 1028926..1029291 | - | 366 | WP_002936483.1 | 50S ribosomal protein L7/L12 | - |
| APQ97_RS05020 () | 1029357..1029851 | - | 495 | WP_002936486.1 | 50S ribosomal protein L10 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|