MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP012868 Location: 1854222..1886102 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Accession: NZ_CP012868 Location: 1854222..1886102 Organism: Escherichia coli str. K-12 substr. MG1655 strain K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQ24_RS09095 () | 1850406..1851674 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| QQ24_RS09100 () | 1851694..1852671 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| QQ24_RS25560 () | 1853007..1855259 | - | 2253 | Protein_1705 | hypothetical protein | - |
| QQ24_RS25565 () | 1856645..1858018 | + | 1374 | Protein_1706 | DUF5507 domain-containing protein | - |
| QQ24_RS23715 () | 1858382..1858591 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| QQ24_RS23725 () | 1858746..1858865 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| QQ24_RS25030 () | 1858930..1863510 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| QQ24_RS09145 () | 1863874..1864203 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| QQ24_RS09150 () | 1864224..1864541 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QQ24_RS23775 () | 1864579..1864779 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| QQ24_RS09155 () | 1864788..1865270 | - | 483 | WP_001407480.1 | RadC family protein | - |
| QQ24_RS09160 () | 1865279..1865737 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| QQ24_RS23780 () | 1865840..1866063 | - | 224 | Protein_1715 | DUF905 family protein | - |
| QQ24_RS09165 () | 1866635..1868338 | - | 1704 | WP_000896263.1 | hypothetical protein | - |
| QQ24_RS09170 () | 1868480..1869489 | + | 1010 | Protein_1717 | arsenic transporter | - |
| QQ24_RS09175 () | 1869502..1869816 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| QQ24_RS09180 () | 1870041..1870508 | - | 468 | WP_000702495.1 | hypothetical protein | - |
| QQ24_RS09185 () | 1870532..1870975 | - | 444 | WP_000824222.1 | hypothetical protein | - |
| QQ24_RS09190 () | 1870975..1871211 | - | 237 | WP_001144029.1 | hypothetical protein | - |
| QQ24_RS09195 () | 1871252..1871953 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| QQ24_RS09200 () | 1872170..1872991 | - | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| QQ24_RS09205 () | 1873083..1873946 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| QQ24_RS09210 () | 1874301..1874672 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| QQ24_RS09215 () | 1874665..1875738 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| QQ24_RS09220 () | 1875880..1876143 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| QQ24_RS09225 () | 1876503..1878119 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| QQ24_RS09230 () | 1878116..1880305 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| QQ24_RS09235 () | 1880483..1881109 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| QQ24_RS09240 () | 1881262..1882671 | - | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| QQ24_RS09245 () | 1882800..1883012 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| QQ24_RS09250 () | 1883056..1884012 | + | 957 | WP_000510827.1 | hypothetical protein | - |
| QQ24_RS09255 () | 1884256..1885497 | - | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| QQ24_RS09260 () | 1886278..1886760 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| QQ24_RS09265 () | 1886931..1887368 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| QQ24_RS09270 () | 1887358..1887648 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| QQ24_RS09275 () | 1887710..1888051 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| QQ24_RS09280 () | 1888200..1889861 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| QQ24_RS09285 () | 1889947..1890825 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |