MGE detailed information
MGE type: IScluster/Tn MGE length: 22922 bp
Accession: NZ_CP012500 Location: 5..22926 Organism: Escherichia coli strain 09-00049 Replicon: plasmid pCFSAN004180G
Accession: NZ_CP012500 Location: 5..22926 Organism: Escherichia coli strain 09-00049 Replicon: plasmid pCFSAN004180G
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GJ12_RS00015 () | 583..1646 | - | 1064 | Protein_1 | IS256 family transposase IS1414 | Transposase |
| GJ12_RS00020 () | 2129..2410 | - | 282 | WP_000220565.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GJ12_RS00025 () | 2400..2651 | - | 252 | WP_000121742.1 | hypothetical protein | Antitoxin Detail |
| GJ12_RS00030 () | 2926..3945 | - | 1020 | WP_024166190.1 | IS110 family transposase ISEc11 | Transposase |
| GJ12_RS30130 () | 5322..5323 | - | 2 | WP_085948398.1 | IS3 family transposase IS1351 | Transposase |
| GJ12_RS00050 () | 5655..6456 | - | 802 | Protein_6 | IS256 family transposase IS1414 | Transposase |
| GJ12_RS00055 () | 6628..7248 | - | 621 | WP_000269721.1 | hypothetical protein | - |
| GJ12_RS00060 () | 7905..8414 | - | 510 | WP_000348341.1 | hypothetical protein | - |
| GJ12_RS00065 () | 8722..8926 | - | 205 | Protein_9 | hypothetical protein | - |
| GJ12_RS00070 () | 9045..9446 | - | 402 | WP_148713600.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| GJ12_RS30905 () | 9379..9636 | - | 258 | WP_000557618.1 | type II toxin-antitoxin system antitoxin PemI | - |
| GJ12_RS00080 () | 9729..9929 | - | 201 | Protein_12 | CPBP family intramembrane metalloprotease | - |
| GJ12_RS00085 () | 10058..10246 | + | 189 | Protein_13 | traX family protein | - |
| GJ12_RS00090 () | 10296..11156 | + | 861 | WP_000704517.1 | putative protein YcjY | VF |
| GJ12_RS30910 () | 11249..11419 | - | 171 | Protein_15 | IS256 family transposase IS1414 | Transposase |
| GJ12_RS00095 () | 11410..11619 | - | 210 | WP_136752748.1 | hypothetical protein | - |
| GJ12_RS00100 () | 11981..12669 | + | 689 | Protein_17 | L-lactate permease | - |
| GJ12_RS00105 () | 12673..14160 | - | 1488 | WP_001364036.1 | PhoPQ-regulated protein | - |
| GJ12_RS30145 () | 14398..15092 | + | 695 | WP_085948397.1 | IS1 family transposase IS1N | Transposase |
| GJ12_RS30915 () | 15428..15704 | + | 277 | Protein_20 | IS3 family transposase ISEcl1 | Transposase |
| GJ12_RS00130 () | 15972..16976 | - | 1005 | WP_001179712.1 | IS110 family transposase ISPlu13 | Transposase |
| GJ12_RS00135 () | 17025..17983 | + | 959 | Protein_22 | IS3 family transposase ISEc48 | Transposase |
| GJ12_RS00140 () | 18136..18790 | + | 655 | Protein_23 | IS481 family transposase ISErsp1 | Transposase |
| GJ12_RS00145 () | 19040..19321 | - | 282 | WP_001081196.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| GJ12_RS00150 () | 19330..19611 | - | 282 | WP_024166187.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GJ12_RS00155 () | 19751..20305 | - | 555 | Protein_26 | IS21 family transposase ISEc10 | Transposase |
| GJ12_RS00160 () | 20301..21083 | - | 783 | Protein_27 | hypothetical protein | - |
| GJ12_RS30920 () | 21132..21287 | - | 156 | WP_000074142.1 | hypothetical protein | - |
| GJ12_RS00165 () | 21895..22926 | + | 1032 | WP_065224993.1 | IS630 family transposase ISSpu2 | Transposase |
| GJ12_RS28160 () | 22975..23181 | + | 207 | WP_071961352.1 | hypothetical protein | - |
| GJ12_RS31585 () | 23189..23590 | + | 402 | WP_052319587.1 | hypothetical protein | - |
| GJ12_RS00175 () | 23688..27506 | - | 3819 | WP_065225488.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|