MGE detailed information
MGE type: IScluster/Tn MGE length: 23198 bp
Accession: NZ_CP012499 Location: 99453..122650 Organism: Escherichia coli strain GB089 Replicon: plasmid pCFSAN004181P
Accession: NZ_CP012499 Location: 99453..122650 Organism: Escherichia coli strain GB089 Replicon: plasmid pCFSAN004181P
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CO57_RS00470 () | 94723..95235 | - | 513 | WP_024166215.1 | hypothetical protein | - |
| CO57_RS00475 () | 95245..96723 | - | 1479 | WP_000156834.1 | type VI secretion system contractile sheath large subunit | - |
| CO57_RS00480 () | 96726..97202 | - | 477 | WP_000072548.1 | type VI secretion system contractile sheath small subunit | - |
| CO57_RS00485 () | 97740..97961 | - | 222 | WP_032287374.1 | hypothetical protein | - |
| CO57_RS30580 () | 99238..99393 | - | 156 | Protein_97 | ISKra4 family transposase | - |
| CO57_RS00495 () | 99453..100306 | + | 854 | Protein_98 | IS3 family transposase | - |
| CO57_RS00500 () | 100306..101369 | - | 1064 | Protein_99 | IS256 family transposase | - |
| CO57_RS00505 () | 101852..102133 | - | 282 | WP_000220565.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CO57_RS00510 () | 102123..102374 | - | 252 | WP_000121742.1 | hypothetical protein | Antitoxin Detail |
| CO57_RS00515 () | 102649..103668 | - | 1020 | WP_024166190.1 | IS110 family transposase | - |
| CO57_RS29790 () | 105045..105046 | - | 2 | WP_085948398.1 | IS3 family transposase | - |
| CO57_RS00535 () | 105378..106179 | - | 802 | Protein_104 | IS256 family transposase | - |
| CO57_RS00540 () | 106351..106971 | - | 621 | WP_000269721.1 | hypothetical protein | - |
| CO57_RS00545 () | 107628..108137 | - | 510 | WP_000348341.1 | hypothetical protein | - |
| CO57_RS00550 () | 108446..108650 | - | 205 | Protein_107 | hypothetical protein | - |
| CO57_RS00555 () | 108769..109170 | - | 402 | WP_148713600.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| CO57_RS30585 () | 109103..109360 | - | 258 | WP_000557618.1 | type II toxin-antitoxin system antitoxin PemI | - |
| CO57_RS00565 () | 109453..109653 | - | 201 | Protein_110 | CPBP family intramembrane metalloprotease | - |
| CO57_RS00570 () | 109782..109970 | + | 189 | Protein_111 | traX family protein | - |
| CO57_RS00575 () | 110020..110880 | + | 861 | WP_000704517.1 | alpha/beta hydrolase | - |
| CO57_RS30590 () | 110973..111143 | - | 171 | Protein_113 | transposase | - |
| CO57_RS00580 () | 111134..111343 | - | 210 | WP_136752748.1 | hypothetical protein | - |
| CO57_RS00585 () | 111705..112393 | + | 689 | Protein_115 | L-lactate permease | - |
| CO57_RS00590 () | 112397..113884 | - | 1488 | WP_001364036.1 | PhoPQ-regulated protein | - |
| CO57_RS29805 () | 114122..114816 | + | 695 | WP_085948397.1 | IS1 family transposase | - |
| CO57_RS30600 () | 115152..115428 | + | 277 | Protein_118 | transposase | - |
| CO57_RS00610 () | 115696..116700 | - | 1005 | WP_001179712.1 | IS110 family transposase | - |
| CO57_RS00615 () | 116749..117707 | + | 959 | Protein_120 | IS3 family transposase | - |
| CO57_RS00620 () | 117860..118514 | + | 655 | Protein_121 | helix-turn-helix domain-containing protein | - |
| CO57_RS00625 () | 118764..119045 | - | 282 | WP_001081196.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| CO57_RS00630 () | 119054..119335 | - | 282 | WP_024166187.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CO57_RS00635 () | 119475..120029 | - | 555 | Protein_124 | IS21-like element ISEc10 family helper ATPase IstB | - |
| CO57_RS00640 () | 120025..120807 | - | 783 | Protein_125 | hypothetical protein | - |
| CO57_RS31310 () | 120856..121011 | - | 156 | WP_000074142.1 | hypothetical protein | - |
| CO57_RS00645 () | 121619..122650 | + | 1032 | WP_065224993.1 | IS630 family transposase | - |
| CO57_RS28015 () | 122699..122905 | + | 207 | WP_071961352.1 | hypothetical protein | - |
| CO57_RS30605 () | 122913..123314 | + | 402 | WP_052319587.1 | hypothetical protein | - |
| CO57_RS00650 () | 123412..127230 | - | 3819 | WP_065275641.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|