MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 34714 bp
Accession: NZ_CP012492 Location: 1..34714 Organism: Escherichia coli strain CFSAN004176 Replicon: plasmid pCFSAN004176P_01
Accession: NZ_CP012492 Location: 1..34714 Organism: Escherichia coli strain CFSAN004176 Replicon: plasmid pCFSAN004176P_01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BCV59_RS00580 () | 233..535 | + | 303 | WP_001346256.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| BCV59_RS00585 () | 526..1008 | + | 483 | WP_000405244.1 | GNAT family N-acetyltransferase | Toxin Detail |
| BCV59_RS00590 () | 1318..1575 | + | 258 | WP_000083826.1 | replication regulatory protein RepA | - |
| BCV59_RS00595 () | 1808..1882 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| BCV59_RS00600 () | 1875..2732 | + | 858 | WP_069356946.1 | incFII family plasmid replication initiator RepA | - |
| BCV59_RS00610 () | 3632..3901 | + | 270 | WP_032191903.1 | hypothetical protein | - |
| BCV59_RS00620 () | 4097..5305 | - | 1209 | WP_069356948.1 | IS91 family transposase ISSbo1 | Transposase |
| BCV59_RS27770 () | 5286..5558 | - | 273 | WP_071961460.1 | hypothetical protein | - |
| BCV59_RS27775 () | 5638..5874 | - | 237 | Protein_8 | IS110 family transposase ISEc21 | Transposase |
| BCV59_RS27780 () | 6085..6353 | - | 269 | Protein_9 | DDE-type integrase/transposase/recombinase | - |
| BCV59_RS00630 () | 6377..6783 | + | 407 | Protein_10 | IS3 family transposase | - |
| BCV59_RS00635 () | 7264..7788 | + | 525 | WP_069356950.1 | Pap fimbrial major pilin protein | VF |
| BCV59_RS00640 () | 7869..8441 | + | 573 | WP_069356951.1 | PAP fimbrial minor pilin protein | VF |
| BCV59_RS00645 () | 8601..11108 | + | 2508 | WP_069356952.1 | Outer membrane usher protein PapC | VF |
| BCV59_RS00650 () | 11177..11908 | + | 732 | WP_069356953.1 | Chaperone protein PapD | VF |
| BCV59_RS00655 () | 11945..12508 | + | 564 | WP_069356954.1 | hypothetical protein | VF |
| BCV59_RS00660 () | 12583..13095 | + | 513 | WP_069356955.1 | Minor fimbrial protein PrsF | VF |
| BCV59_RS00665 () | 13117..14109 | + | 993 | WP_069356956.1 | nuclease PIN | - |
| BCV59_RS00670 () | 14514..15407 | + | 894 | Protein_18 | ISL3 family transposase ISEc38 | Transposase |
| BCV59_RS30795 () | 16750..16842 | - | 93 | Protein_20 | IS66 family transposase IS682 | Transposase |
| BCV59_RS00685 () | 16839..17264 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| BCV59_RS00690 () | 17346..17684 | - | 339 | WP_185768398.1 | hypothetical protein | - |
| BCV59_RS27790 () | 17752..17928 | + | 177 | Protein_23 | hypothetical protein | - |
| BCV59_RS00695 () | 17950..18285 | - | 336 | WP_069356957.1 | colicin transporter | - |
| BCV59_RS00700 () | 18414..18761 | + | 348 | WP_069356958.1 | hypothetical protein | - |
| BCV59_RS00705 () | 18779..19369 | - | 591 | WP_069356959.1 | hypothetical protein | - |
| BCV59_RS00710 () | 19369..19626 | - | 258 | WP_000343099.1 | hypothetical protein | - |
| BCV59_RS30800 () | 19723..19977 | + | 255 | WP_158707834.1 | hypothetical protein | - |
| BCV59_RS00720 () | 20221..20439 | + | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| BCV59_RS00725 () | 20441..20746 | + | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| BCV59_RS00730 () | 20747..21553 | + | 807 | WP_069356961.1 | site-specific integrase | - |
| BCV59_RS00735 () | 21915..23138 | - | 1224 | WP_172907135.1 | RepB family plasmid replication initiator protein | - |
| BCV59_RS00745 () | 23323..24535 | + | 1213 | Protein_33 | IS3 family transposase | - |
| BCV59_RS00750 () | 25054..26259 | + | 1206 | WP_024257415.1 | Plasmid partition protein A | VF |
| BCV59_RS00755 () | 26256..27227 | + | 972 | WP_001233382.1 | ParB/RepB/Spo0J family partition protein | - |
| BCV59_RS00760 () | 27362..28465 | - | 1104 | Protein_36 | translesion error-prone DNA polymerase V subunit UmuC | - |
| BCV59_RS00765 () | 28503..30116 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| BCV59_RS00770 () | 30147..30497 | - | 351 | WP_069356963.1 | IS66 family transposase ISEc23 | Transposase |
| BCV59_RS00775 () | 30494..30919 | - | 426 | WP_000422686.1 | IS66 family transposase ISEc23 | Transposase |
| BCV59_RS00780 () | 30994..31179 | - | 186 | Protein_40 | DNA polymerase V subunit UmuC | - |
| BCV59_RS00785 () | 31179..31412 | - | 234 | Protein_41 | peptidase | - |
| BCV59_RS00790 () | 31478..32260 | - | 783 | WP_001317493.1 | IS21 family transposase IS100kyp | Transposase |
| BCV59_RS00795 () | 32257..33237 | - | 981 | WP_069356965.1 | IS21 family transposase IS100kyp | Transposase |
| BCV59_RS00805 () | 33399..34555 | + | 1157 | WP_085948186.1 | IS3 family transposase ISSd1 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|