MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 39335 bp
Accession: NZ_CP012414 Location: 1..39335 Organism: Piscirickettsia salmonis strain PM15972A1 Replicon: plasmid pPSA1-1
Accession: NZ_CP012414 Location: 1..39335 Organism: Piscirickettsia salmonis strain PM15972A1 Replicon: plasmid pPSA1-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KW89_RS15430 () | 11..1693 | - | 1683 | WP_054300577.1 | terminase large subunit | - |
| KW89_RS15435 () | 1697..2176 | - | 480 | WP_016212234.1 | P27 family phage terminase small subunit | - |
| KW89_RS15440 () | 2264..2647 | - | 384 | WP_032126134.1 | HNH endonuclease | - |
| KW89_RS15445 () | 2957..3322 | - | 366 | WP_016212235.1 | hypothetical protein | - |
| KW89_RS18140 () | 3369..3548 | + | 180 | WP_155046773.1 | phosphatase | - |
| KW89_RS18365 () | 3815..4093 | - | 279 | WP_032126476.1 | hypothetical protein | - |
| KW89_RS15455 () | 4093..4386 | - | 294 | WP_016210977.1 | zinc ribbon domain-containing protein | - |
| KW89_RS15460 () | 4565..5245 | - | 681 | WP_129556725.1 | DNA/RNA non-specific endonuclease | - |
| KW89_RS15465 () | 5362..5769 | - | 408 | WP_016210974.1 | DUF4411 family protein | Toxin Detail |
| KW89_RS15470 () | 5778..6005 | - | 228 | WP_016210972.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| KW89_RS17455 () | 6142..7116 | - | 975 | WP_054300271.1 | IS30 family transposase ISPlu1 | Transposase |
| KW89_RS15480 () | 7342..8433 | - | 1092 | WP_054300578.1 | hypothetical protein | - |
| KW89_RS15485 () | 8964..9428 | - | 465 | WP_016212274.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| KW89_RS15490 () | 9439..9633 | - | 195 | WP_032126154.1 | type II toxin-antitoxin system HicA family toxin | - |
| KW89_RS15495 () | 9849..10439 | + | 591 | WP_032126152.1 | site-specific integrase | - |
| KW89_RS15500 () | 10503..10844 | + | 342 | WP_081007075.1 | MBL fold metallo-hydrolase | - |
| KW89_RS15505 () | 11190..12191 | - | 1002 | WP_054300579.1 | IS30 family transposase ISPlu1 | Transposase |
| KW89_RS15510 () | 12521..14593 | + | 2073 | WP_036779013.1 | S9 family peptidase | - |
| KW89_RS15515 () | 14623..15351 | + | 729 | WP_054300580.1 | IS6 family transposase ISPsa2 | Transposase |
| KW89_RS15520 () | 15493..16425 | + | 933 | WP_144420837.1 | hypothetical protein | - |
| KW89_RS17460 () | 16455..16745 | + | 291 | Protein_20 | IS6 family transposase | - |
| KW89_RS15530 () | 16812..17450 | - | 639 | Protein_21 | IS6 family transposase ISPsa2 | Transposase |
| KW89_RS15535 () | 17516..18244 | - | 729 | WP_054300581.1 | IS6 family transposase ISPsa2 | Transposase |
| KW89_RS15540 () | 18274..18819 | - | 546 | WP_054300582.1 | 3-oxoacyl-[acyl-carrier-protein] reductase FabG | VF |
| KW89_RS15545 () | 18827..19267 | - | 441 | WP_054300583.1 | thioesterase family protein | - |
| KW89_RS15550 () | 19306..20436 | - | 1131 | WP_054300584.1 | hypothetical protein | - |
| KW89_RS15560 () | 20764..21789 | + | 1026 | WP_052104629.1 | IS91 family transposase ISVsa9 | Transposase |
| KW89_RS15565 () | 21964..22422 | - | 459 | WP_054300586.1 | hypothetical protein | - |
| KW89_RS15575 () | 22847..23872 | + | 1026 | WP_052104629.1 | IS91 family transposase ISVsa9 | Transposase |
| KW89_RS15580 () | 24335..24688 | - | 354 | WP_036780061.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| KW89_RS15585 () | 24681..24941 | - | 261 | WP_027242955.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| KW89_RS17475 () | 25190..26164 | + | 975 | WP_054300271.1 | IS30 family transposase ISPlu1 | Transposase |
| KW89_RS15595 () | 26341..27573 | - | 1233 | WP_032126623.1 | MFS transporter | - |
| KW89_RS15600 () | 27686..28711 | - | 1026 | WP_032126388.1 | helix-turn-helix domain-containing protein | - |
| KW89_RS15605 () | 29472..30494 | + | 1023 | WP_016211377.1 | AAA family ATPase | - |
| KW89_RS15610 () | 30518..31387 | + | 870 | WP_016211383.1 | hypothetical protein | - |
| KW89_RS15615 () | 31693..31956 | + | 264 | WP_032126138.1 | RNA-binding protein | - |
| KW89_RS15620 () | 32268..33293 | - | 1026 | WP_052104629.1 | IS91 family transposase ISVsa9 | Transposase |
| KW89_RS15625 () | 33569..33880 | - | 312 | Protein_38 | IS6 family transposase | - |
| KW89_RS15630 () | 33910..34134 | - | 225 | WP_054300590.1 | hypothetical protein | - |
| KW89_RS15635 () | 34469..35050 | + | 582 | WP_036778347.1 | hypothetical protein | - |
| KW89_RS15640 () | 35086..36279 | - | 1194 | WP_054300591.1 | phage major capsid protein | - |
| KW89_RS15645 () | 36334..36990 | - | 657 | WP_054300592.1 | ATP-dependent Clp protease proteolytic subunit | VF |
| KW89_RS15650 () | 36953..38194 | - | 1242 | WP_054300593.1 | phage portal protein | - |
| KW89_RS15655 () | 38266..39327 | + | 1062 | WP_054300392.1 | IS701 family transposase ISAeme11 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|