MGE detailed information
MGE type: Prophage MGE length: 68180 bp
Accession: NZ_CP012266 Location: 2619762..2687941 Organism: Cronobacter dublinensis subsp. dublinensis LMG 23823 Replicon: chromosome
Accession: NZ_CP012266 Location: 2619762..2687941 Organism: Cronobacter dublinensis subsp. dublinensis LMG 23823 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AFK67_RS11860 () | 2615369..2616274 | - | 906 | WP_007732003.1 | NmrA/HSCARG family protein | - |
| AFK67_RS11865 () | 2616414..2617331 | + | 918 | WP_007732006.1 | LysR family transcriptional regulator | - |
| AFK67_RS11870 () | 2617614..2618822 | - | 1209 | WP_038883378.1 | MFS transporter | - |
| AFK67_RS22010 () | 2618961..2619611 | + | 651 | WP_071602714.1 | ArsR family transcriptional regulator | - |
| AFK67_RS11880 () | 2619762..2621024 | - | 1263 | WP_038883377.1 | Y-family DNA polymerase | - |
| AFK67_RS11885 () | 2621008..2621445 | - | 438 | WP_032966629.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AFK67_RS23070 () | 2621582..2621809 | - | 228 | WP_050569275.1 | phage tail assembly chaperone | - |
| AFK67_RS23075 () | 2621802..2622044 | - | 243 | WP_050569274.1 | hypothetical protein | - |
| AFK67_RS23285 () | 2622049..2624094 | - | 2046 | WP_200907774.1 | hypothetical protein | - |
| AFK67_RS11905 () | 2624153..2625112 | - | 960 | WP_053532892.1 | hypothetical protein | - |
| AFK67_RS11910 () | 2625112..2628414 | - | 3303 | WP_038883370.1 | host specificity protein J | - |
| AFK67_RS11915 () | 2628464..2629060 | - | 597 | WP_053532894.1 | tail assembly protein | - |
| AFK67_RS11920 () | 2629057..2629761 | - | 705 | WP_007709645.1 | C40 family peptidase | - |
| AFK67_RS11925 () | 2629764..2630516 | - | 753 | WP_053532896.1 | phage minor tail protein L | - |
| AFK67_RS11930 () | 2630523..2630861 | - | 339 | WP_007728442.1 | phage tail protein | - |
| AFK67_RS11935 () | 2630908..2633265 | - | 2358 | WP_050569273.1 | phage tail tape measure protein | - |
| AFK67_RS22585 () | 2633432..2633608 | - | 177 | WP_081225690.1 | zinc-ribbon domain-containing protein | - |
| AFK67_RS11940 () | 2633840..2634322 | - | 483 | WP_007732687.1 | phage tail assembly chaperone family protein, TAC | - |
| AFK67_RS11945 () | 2634371..2634874 | - | 504 | WP_007732685.1 | phage tail fibers | - |
| AFK67_RS11950 () | 2634923..2635288 | - | 366 | WP_007732682.1 | DUF3168 domain-containing protein | - |
| AFK67_RS11955 () | 2635285..2635770 | - | 486 | WP_007732679.1 | HK97 gp10 family phage protein | - |
| AFK67_RS11960 () | 2635763..2636095 | - | 333 | WP_032967656.1 | phage head closure protein | - |
| AFK67_RS11965 () | 2636098..2636304 | - | 207 | WP_007732664.1 | hypothetical protein | - |
| AFK67_RS11970 () | 2636375..2636701 | - | 327 | WP_007732662.1 | head-tail connector protein | - |
| AFK67_RS22025 () | 2636698..2639261 | - | 2564 | Protein_2383 | phage portal protein | - |
| AFK67_RS23250 () | 2639261..2639428 | - | 168 | WP_007889812.1 | hypothetical protein | - |
| AFK67_RS11985 () | 2639466..2641406 | - | 1941 | WP_007732656.1 | phage major capsid protein | - |
| AFK67_RS11990 () | 2641465..2643123 | - | 1659 | WP_007732655.1 | terminase large subunit | - |
| AFK67_RS11995 () | 2643127..2643624 | - | 498 | WP_038883350.1 | terminase small subunit | - |
| AFK67_RS12000 () | 2643729..2644097 | - | 369 | WP_032967289.1 | HNH endonuclease | - |
| AFK67_RS12005 () | 2644090..2644680 | - | 591 | WP_007723109.1 | hypothetical protein | - |
| AFK67_RS12010 () | 2644792..2645310 | + | 519 | WP_032967287.1 | hypothetical protein | - |
| AFK67_RS12015 () | 2645465..2646922 | - | 1458 | WP_038883348.1 | glycosyltransferase | - |
| AFK67_RS12020 () | 2646970..2647386 | - | 417 | WP_032967286.1 | hypothetical protein | - |
| AFK67_RS12025 () | 2647574..2648056 | - | 483 | WP_050555353.1 | lysis protein | - |
| AFK67_RS12030 () | 2648056..2648679 | - | 624 | WP_053532898.1 | glycoside hydrolase family 19 protein | - |
| AFK67_RS12035 () | 2648676..2648960 | - | 285 | WP_007709085.1 | phage holin family protein | - |
| AFK67_RS12040 () | 2648947..2649327 | - | 381 | WP_007734264.1 | phage holin family protein | - |
| AFK67_RS12045 () | 2649418..2649825 | - | 408 | WP_007734261.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| AFK67_RS22030 () | 2649875..2650051 | - | 177 | WP_032967702.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| AFK67_RS12050 () | 2650228..2650917 | - | 690 | WP_007734259.1 | antiterminator-like protein | - |
| AFK67_RS12055 () | 2651081..2651446 | - | 366 | WP_032967701.1 | RusA family crossover junction endodeoxyribonuclease | - |
| AFK67_RS12060 () | 2651443..2651733 | - | 291 | WP_032967700.1 | DUF1364 domain-containing protein | - |
| AFK67_RS22865 () | 2651726..2651893 | - | 168 | WP_032967699.1 | hypothetical protein | - |
| AFK67_RS12065 () | 2652167..2652622 | - | 456 | WP_007734254.1 | YbcN family protein | - |
| AFK67_RS12070 () | 2652917..2653765 | + | 849 | WP_134792955.1 | hypothetical protein | - |
| AFK67_RS12075 () | 2653975..2654196 | - | 222 | WP_032967697.1 | hypothetical protein | - |
| AFK67_RS12080 () | 2654193..2654897 | - | 705 | WP_007734253.1 | phage DNA replication protein P | - |
| AFK67_RS12085 () | 2654894..2655862 | - | 969 | WP_007734252.1 | replication protein | - |
| AFK67_RS12090 () | 2655922..2656740 | - | 819 | WP_032967696.1 | DNA-binding protein | - |
| AFK67_RS12095 () | 2656785..2657366 | - | 582 | WP_050555394.1 | hypothetical protein | - |
| AFK67_RS12100 () | 2657430..2657645 | - | 216 | WP_007734250.1 | helix-turn-helix domain-containing protein | - |
| AFK67_RS12105 () | 2657745..2658377 | + | 633 | WP_032967695.1 | helix-turn-helix domain-containing protein | - |
| AFK67_RS12110 () | 2658927..2659133 | + | 207 | WP_200863223.1 | hypothetical protein | - |
| AFK67_RS12115 () | 2659130..2659312 | + | 183 | WP_007734241.1 | hypothetical protein | - |
| AFK67_RS12125 () | 2659513..2659818 | - | 306 | WP_032967704.1 | hypothetical protein | - |
| AFK67_RS12130 () | 2659955..2660254 | + | 300 | WP_032967693.1 | host nuclease inhibitor GamL | - |
| AFK67_RS12135 () | 2660251..2661147 | + | 897 | WP_032967692.1 | YqaJ viral recombinase family protein | - |
| AFK67_RS12140 () | 2661158..2662012 | + | 855 | WP_007734236.1 | recombination protein RecT | - |
| AFK67_RS12145 () | 2662179..2662931 | + | 753 | WP_007734232.1 | hypothetical protein | - |
| AFK67_RS12150 () | 2662936..2663595 | + | 660 | Protein_2419 | DNA methyltransferase | - |
| AFK67_RS12155 () | 2663592..2663810 | + | 219 | WP_032967691.1 | hypothetical protein | - |
| AFK67_RS22875 () | 2664369..2664563 | - | 195 | WP_134792954.1 | hypothetical protein | - |
| AFK67_RS12165 () | 2665106..2665378 | + | 273 | WP_032967689.1 | excisionase | - |
| AFK67_RS12170 () | 2665347..2666432 | + | 1086 | WP_038883315.1 | hypothetical protein ; Integrase | Integrase |
| - () | 2666508..2666648 | + | 141 | - | - | Antitoxin Detail |
| - () | 2666510..2666613 | - | 104 | - | - | Toxin Detail |
| AFK67_RS12175 () | 2666752..2667090 | - | 339 | WP_007698868.1 | YebY family protein | - |
| AFK67_RS12180 () | 2667105..2667974 | - | 870 | WP_032967688.1 | copper homeostasis membrane protein CopD | - |
| AFK67_RS12185 () | 2667979..2668353 | - | 375 | WP_007734211.1 | CopC domain-containing protein YobA | - |
| AFK67_RS12190 () | 2668500..2668730 | + | 231 | WP_007734209.1 | DNA polymerase III subunit theta | - |
| AFK67_RS12195 () | 2668806..2669468 | + | 663 | WP_007734207.1 | exodeoxyribonuclease X | - |
| AFK67_RS12200 () | 2669465..2671528 | - | 2064 | WP_032967687.1 | oligopeptidase B | - |
| AFK67_RS12205 () | 2671618..2672301 | - | 684 | WP_007734203.1 | DUF533 domain-containing protein | - |
| AFK67_RS12210 () | 2672418..2672765 | - | 348 | WP_007734200.1 | protein YebF | - |
| AFK67_RS12215 () | 2673075..2673425 | - | 351 | WP_007734199.1 | YebG family protein | - |
| AFK67_RS12220 () | 2673558..2674736 | + | 1179 | WP_007734197.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| AFK67_RS12225 () | 2674790..2675428 | - | 639 | WP_007734195.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| AFK67_RS12230 () | 2675487..2677298 | - | 1812 | WP_032967686.1 | phosphogluconate dehydratase | - |
| AFK67_RS12235 () | 2677529..2679004 | - | 1476 | WP_038871240.1 | glucose-6-phosphate dehydrogenase | - |
| AFK67_RS12240 () | 2679358..2680224 | + | 867 | WP_007734190.1 | MurR/RpiR family transcriptional regulator | - |
| AFK67_RS12245 () | 2680353..2681795 | + | 1443 | WP_007734187.1 | pyruvate kinase | - |
| AFK67_RS12250 () | 2681861..2682829 | - | 969 | WP_038883311.1 | Lipid A biosynthesis myristoyltransferase | VF |
| AFK67_RS12255 () | 2682955..2684286 | - | 1332 | WP_007734184.1 | murein DD-endopeptidase MepM | - |
| AFK67_RS12260 () | 2684302..2685246 | - | 945 | WP_038871504.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| AFK67_RS12265 () | 2685325..2686080 | + | 756 | WP_038883309.1 | Zinc import ATP-binding protein ZnuC | VF |
| AFK67_RS12270 () | 2686077..2686862 | + | 786 | WP_007719313.1 | zinc ABC transporter permease subunit ZnuB | - |
| AFK67_RS12275 () | 2686931..2687941 | - | 1011 | WP_007719316.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| AFK67_RS12280 () | 2687950..2688561 | - | 612 | WP_007719318.1 | Holliday junction branch migration protein RuvA | - |
| AFK67_RS12285 () | 2688706..2689227 | - | 522 | WP_032967022.1 | crossover junction endodeoxyribonuclease RuvC | - |
| AFK67_RS12290 () | 2689262..2690002 | - | 741 | WP_007719323.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| AFK67_RS12295 () | 2690030..2690473 | - | 444 | WP_007719325.1 | dihydroneopterin triphosphate diphosphatase | - |
| AFK67_RS12300 () | 2690474..2692270 | - | 1797 | WP_007719327.1 | aspartate--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|