MGE detailed information
MGE type: Prophage MGE length: 19087 bp
Accession: NZ_CP012126 Location: 1615806..1634892 Organism: Escherichia coli strain DH1Ec104 Replicon: chromosome
Accession: NZ_CP012126 Location: 1615806..1634892 Organism: Escherichia coli strain DH1Ec104 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ADZ27_RS07925 () | 1611399..1611602 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| ADZ27_RS07930 () | 1611637..1613097 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| ADZ27_RS07935 () | 1613186..1614553 | - | 1368 | Protein_1517 | MHS family MFS transporter | - |
| ADZ27_RS25340 () | 1615074..1615187 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| ADZ27_RS07940 () | 1615256..1615489 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| ADZ27_RS07945 () | 1615806..1616396 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| ADZ27_RS07950 () | 1616494..1617069 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| ADZ27_RS07955 () | 1617069..1618031 | - | 963 | WP_001027733.1 | phage tail protein | - |
| ADZ27_RS07960 () | 1617982..1618551 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| ADZ27_RS07965 () | 1618940..1619173 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| ADZ27_RS07970 () | 1619231..1619641 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| ADZ27_RS07975 () | 1619793..1619966 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| ADZ27_RS07980 () | 1620138..1620293 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| ADZ27_RS25345 () | 1620372..1620437 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| ADZ27_RS23535 () | 1620440..1620628 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| ADZ27_RS07985 () | 1620639..1620851 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| ADZ27_RS07990 () | 1621214..1621711 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| ADZ27_RS07995 () | 1621708..1622241 | - | 534 | WP_001092971.1 | lysozyme | - |
| ADZ27_RS08000 () | 1622238..1622549 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| ADZ27_RS08005 () | 1622554..1622769 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| ADZ27_RS08010 () | 1623523..1623738 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| ADZ27_RS08015 () | 1624039..1624251 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| ADZ27_RS25350 () | 1624306..1624395 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| ADZ27_RS08020 () | 1624673..1625425 | - | 753 | WP_001047135.1 | antitermination protein | - |
| ADZ27_RS08025 () | 1625439..1626488 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| ADZ27_RS08030 () | 1626490..1626768 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| ADZ27_RS08035 () | 1626835..1627086 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| ADZ27_RS08040 () | 1627303..1627458 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| ADZ27_RS08045 () | 1627530..1627817 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| ADZ27_RS08050 () | 1627817..1628056 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| ADZ27_RS23540 () | 1628081..1628386 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| ADZ27_RS08055 () | 1628589..1628921 | + | 333 | WP_001301033.1 | protein FlxA | - |
| ADZ27_RS22775 () | 1629358..1629507 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| ADZ27_RS08060 () | 1629542..1629820 | - | 279 | Protein_1548 | hypothetical protein | - |
| ADZ27_RS08065 () | 1629804..1630034 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| ADZ27_RS08070 () | 1630118..1630525 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| ADZ27_RS08075 () | 1630692..1630847 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| ADZ27_RS08080 () | 1631007..1631225 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| ADZ27_RS08090 () | 1631793..1631981 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| ADZ27_RS08095 () | 1631978..1632169 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| ADZ27_RS23555 () | 1632262..1633029 | + | 768 | Protein_1555 | exonuclease | - |
| ADZ27_RS08105 () | 1633026..1633721 | + | 696 | Protein_1556 | IS3 family transposase IS2 | Transposase |
| ADZ27_RS25360 () | 1633735..1634892 | + | 1158 | Protein_1557 | Putative defective protein IntQ ; Integrase | Integrase |
| ADZ27_RS24845 () | 1634912..1635022 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| ADZ27_RS08115 () | 1635080..1636099 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| ADZ27_RS08120 () | 1636111..1637325 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| ADZ27_RS08125 () | 1637531..1637857 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| ADZ27_RS08130 () | 1637992..1638333 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| ADZ27_RS08135 () | 1638368..1638928 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| ADZ27_RS08140 () | 1638931..1639641 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0.003 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.005 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0.003 |