MGE detailed information
MGE type: Prophage MGE length: 19087 bp
Accession: NZ_CP012125 Location: 1615805..1634891 Organism: Escherichia coli strain DH1Ec095 Replicon: chromosome
Accession: NZ_CP012125 Location: 1615805..1634891 Organism: Escherichia coli strain DH1Ec095 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ADS71_RS07925 () | 1611398..1611601 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| ADS71_RS07930 () | 1611636..1613096 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| ADS71_RS07935 () | 1613185..1614552 | - | 1368 | Protein_1517 | MHS family MFS transporter | - |
| ADS71_RS25345 () | 1615073..1615186 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| ADS71_RS07940 () | 1615255..1615488 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| ADS71_RS07945 () | 1615805..1616395 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| ADS71_RS07950 () | 1616493..1617068 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| ADS71_RS07955 () | 1617068..1618030 | - | 963 | WP_001027733.1 | phage tail protein | - |
| ADS71_RS07960 () | 1617981..1618550 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| ADS71_RS07965 () | 1618939..1619172 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| ADS71_RS07970 () | 1619230..1619640 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| ADS71_RS07975 () | 1619792..1619965 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| ADS71_RS07980 () | 1620137..1620292 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| ADS71_RS25350 () | 1620371..1620436 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| ADS71_RS23545 () | 1620439..1620627 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| ADS71_RS07985 () | 1620638..1620850 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| ADS71_RS07990 () | 1621213..1621710 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| ADS71_RS07995 () | 1621707..1622240 | - | 534 | WP_001092971.1 | lysozyme | - |
| ADS71_RS08000 () | 1622237..1622548 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| ADS71_RS08005 () | 1622553..1622768 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| ADS71_RS08010 () | 1623522..1623737 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| ADS71_RS08015 () | 1624038..1624250 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| ADS71_RS25355 () | 1624305..1624394 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| ADS71_RS08020 () | 1624672..1625424 | - | 753 | WP_001047135.1 | antitermination protein | - |
| ADS71_RS08025 () | 1625438..1626487 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| ADS71_RS08030 () | 1626489..1626767 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| ADS71_RS08035 () | 1626834..1627085 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| ADS71_RS08040 () | 1627302..1627457 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| ADS71_RS08045 () | 1627529..1627816 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| ADS71_RS08050 () | 1627816..1628055 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| ADS71_RS23550 () | 1628080..1628385 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| ADS71_RS08055 () | 1628588..1628920 | + | 333 | WP_001301033.1 | protein FlxA | - |
| ADS71_RS22780 () | 1629357..1629506 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| ADS71_RS08060 () | 1629541..1629819 | - | 279 | Protein_1548 | hypothetical protein | - |
| ADS71_RS08065 () | 1629803..1630033 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| ADS71_RS08070 () | 1630117..1630524 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| ADS71_RS08075 () | 1630691..1630846 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| ADS71_RS08080 () | 1631006..1631224 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| ADS71_RS08090 () | 1631792..1631980 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| ADS71_RS08095 () | 1631977..1632168 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| ADS71_RS23565 () | 1632261..1633028 | + | 768 | Protein_1555 | exonuclease | - |
| ADS71_RS08105 () | 1633025..1633720 | + | 696 | Protein_1556 | IS3 family transposase IS2 | Transposase |
| ADS71_RS25365 () | 1633734..1634891 | + | 1158 | Protein_1557 | Putative defective protein IntQ ; Integrase | Integrase |
| ADS71_RS24855 () | 1634911..1635021 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| ADS71_RS08115 () | 1635079..1636098 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| ADS71_RS08120 () | 1636110..1637324 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| ADS71_RS08125 () | 1637530..1637856 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| ADS71_RS08130 () | 1637991..1638332 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| ADS71_RS08135 () | 1638367..1638927 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| ADS71_RS08140 () | 1638930..1639640 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0.003 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.005 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0.003 |