MGE detailed information
MGE type: Prophage MGE length: 72281 bp
Accession: NZ_CP012018 Location: 1629560..1701840 Organism: Staphylococcus aureus strain Gv88 Replicon: chromosome
Accession: NZ_CP012018 Location: 1629560..1701840 Organism: Staphylococcus aureus strain Gv88 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAGV88_RS08070 () | 1625898..1626089 | - | 192 | WP_001789944.1 | hypothetical protein | - |
| SAGV88_RS08080 () | 1626206..1626322 | - | 117 | WP_001789945.1 | hypothetical protein | - |
| SAGV88_RS08085 () | 1626353..1627012 | - | 660 | WP_000644391.1 | (d)CMP kinase | - |
| SAGV88_RS08090 () | 1627089..1628057 | + | 969 | WP_000681758.1 | asparaginase | - |
| SAGV88_RS08095 () | 1628172..1629158 | - | 987 | WP_001174260.1 | YpdA family putative bacillithiol disulfide reductase | - |
| SAGV88_RS08100 () | 1629319..1629435 | - | 117 | WP_001789943.1 | hypothetical protein | - |
| SAGV88_RS08105 () | 1629560..1631020 | - | 1461 | WP_000069282.1 | hypothetical protein | VF |
| SAGV88_RS08110 () | 1631173..1632552 | - | 1380 | WP_000902119.1 | ATP-dependent DNA helicase | - |
| SAGV88_RS08115 () | 1632542..1633495 | - | 954 | WP_001163801.1 | helix-turn-helix domain-containing protein | - |
| SAGV88_RS08120 () | 1633603..1633851 | + | 249 | WP_001151997.1 | ferredoxin | - |
| SAGV88_RS08125 () | 1633957..1634502 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| SAGV88_RS08130 () | 1634781..1634900 | - | 120 | WP_001789947.1 | hypothetical protein | - |
| SAGV88_RS08135 () | 1635099..1636013 | - | 915 | WP_000913219.1 | DUF1672 domain-containing protein | - |
| SAGV88_RS08140 () | 1636028..1636234 | - | 207 | WP_001033757.1 | hypothetical protein | - |
| SAGV88_RS08145 () | 1636227..1637165 | - | 939 | WP_020444682.1 | DUF1672 domain-containing protein | - |
| SAGV88_RS08150 () | 1637223..1638140 | - | 918 | WP_000476873.1 | DUF1672 domain-containing protein | - |
| SAGV88_RS08155 () | 1638231..1638416 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| SAGV88_RS08160 () | 1638692..1639249 | - | 558 | WP_000528632.1 | hypothetical protein | - |
| SAGV88_RS08165 () | 1639974..1641428 | - | 1455 | WP_020444681.1 | N-acetylmuramoyl-L-alanine amidase | - |
| SAGV88_RS08170 () | 1641439..1641741 | - | 303 | WP_000339141.1 | phage holin | - |
| SAGV88_RS08175 () | 1641877..1642176 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| SAGV88_RS08180 () | 1642222..1642386 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| SAGV88_RS08185 () | 1642379..1642768 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| SAGV88_RS08190 () | 1642768..1644234 | - | 1467 | WP_020444680.1 | BppU family phage baseplate upper protein | - |
| SAGV88_RS08195 () | 1644234..1646144 | - | 1911 | WP_000429552.1 | hypothetical protein | - |
| SAGV88_RS08200 () | 1646160..1646450 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| SAGV88_RS08205 () | 1646450..1648033 | - | 1584 | WP_000384462.1 | prophage endopeptidase tail family protein | - |
| SAGV88_RS08210 () | 1648042..1648866 | - | 825 | WP_020444679.1 | phage tail family protein | - |
| SAGV88_RS08215 () | 1648866..1655066 | - | 6201 | WP_020444678.1 | phage tail tape measure protein | - |
| SAGV88_RS08220 () | 1655080..1655238 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| SAGV88_RS08225 () | 1655289..1655630 | - | 342 | WP_000589166.1 | hypothetical protein | - |
| SAGV88_RS08230 () | 1655688..1656143 | - | 456 | WP_020444677.1 | Ig domain-containing protein | - |
| SAGV88_RS08235 () | 1656235..1656876 | - | 642 | WP_000807540.1 | tail protein | - |
| SAGV88_RS08240 () | 1656911..1657306 | - | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| SAGV88_RS08245 () | 1657307..1657708 | - | 402 | WP_000110020.1 | hypothetical protein | - |
| SAGV88_RS08250 () | 1657705..1658037 | - | 333 | WP_000395501.1 | hypothetical protein | - |
| SAGV88_RS08255 () | 1658049..1658327 | - | 279 | WP_000050975.1 | head-tail connector protein | - |
| SAGV88_RS08260 () | 1658396..1659559 | - | 1164 | WP_001142735.1 | phage major capsid protein | - |
| SAGV88_RS08265 () | 1659571..1660344 | - | 774 | WP_021187674.1 | Clp protease ClpP | - |
| SAGV88_RS08270 () | 1660328..1661566 | - | 1239 | WP_020444675.1 | phage portal protein | - |
| SAGV88_RS08275 () | 1661571..1663262 | - | 1692 | WP_020444674.1 | terminase large subunit | - |
| SAGV88_RS08280 () | 1663252..1663557 | - | 306 | WP_020444673.1 | P27 family phage terminase small subunit | - |
| SAGV88_RS08285 () | 1663683..1664003 | - | 321 | WP_000166257.1 | HNH endonuclease | - |
| SAGV88_RS08290 () | 1664164..1664601 | - | 438 | WP_000513704.1 | transcriptional regulator | - |
| SAGV88_RS08295 () | 1664614..1665981 | - | 1368 | WP_078066180.1 | DEAD/DEAH box helicase | - |
| SAGV88_RS08300 () | 1665962..1666252 | - | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| SAGV88_RS08305 () | 1666386..1666490 | + | 105 | WP_011447017.1 | hypothetical protein | - |
| SAGV88_RS08310 () | 1666593..1669040 | - | 2448 | WP_020444670.1 | virulence-associated E family protein | - |
| SAGV88_RS08315 () | 1669092..1669292 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| SAGV88_RS08320 () | 1669360..1669512 | - | 153 | WP_000237866.1 | transcriptional activator RinB | - |
| SAGV88_RS08325 () | 1669515..1669715 | - | 201 | WP_001125015.1 | hypothetical protein | - |
| SAGV88_RS08330 () | 1669690..1669878 | - | 189 | WP_000195789.1 | DUF1381 domain-containing protein | - |
| SAGV88_RS08335 () | 1669895..1670068 | - | 174 | WP_001209219.1 | hypothetical protein | - |
| SAGV88_RS08340 () | 1670105..1670639 | - | 535 | Protein_1609 | dUTP pyrophosphatase | - |
| SAGV88_RS08345 () | 1670632..1670880 | - | 249 | WP_031782730.1 | DUF1024 family protein | - |
| SAGV88_RS08350 () | 1670873..1671181 | - | 309 | WP_001668981.1 | hypothetical protein | - |
| SAGV88_RS08355 () | 1671178..1671524 | - | 347 | Protein_1612 | hypothetical protein | - |
| SAGV88_RS08360 () | 1671521..1671925 | - | 405 | WP_020444668.1 | hypothetical protein | - |
| SAGV88_RS08365 () | 1671938..1672186 | - | 249 | WP_072466103.1 | hypothetical protein | - |
| SAGV88_RS08370 () | 1672186..1672440 | - | 255 | WP_031782732.1 | DUF3310 domain-containing protein | - |
| SAGV88_RS08375 () | 1672440..1672841 | - | 402 | WP_031782733.1 | phage DNA polymerase | - |
| SAGV88_RS08380 () | 1672841..1673026 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| SAGV88_RS08385 () | 1673039..1674991 | - | 1953 | WP_001796208.1 | DNA polymerase | - |
| SAGV88_RS08390 () | 1675060..1675617 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| SAGV88_RS08395 () | 1675643..1676809 | - | 1167 | WP_000762547.1 | DUF2800 domain-containing protein | - |
| SAGV88_RS08400 () | 1676806..1677168 | - | 363 | WP_000985984.1 | hypothetical protein | - |
| SAGV88_RS08405 () | 1677183..1677506 | - | 324 | WP_000175001.1 | hypothetical protein | - |
| SAGV88_RS08410 () | 1677585..1677746 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| SAGV88_RS08415 () | 1677759..1678022 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| SAGV88_RS08420 () | 1678047..1678262 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| SAGV88_RS08425 () | 1678317..1678682 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| SAGV88_RS08430 () | 1678651..1678896 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| SAGV88_RS08435 () | 1678952..1679161 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| SAGV88_RS08440 () | 1679151..1679294 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| SAGV88_RS08445 () | 1679323..1680099 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| SAGV88_RS08450 () | 1680113..1680349 | - | 237 | WP_001121027.1 | helix-turn-helix domain-containing protein | - |
| SAGV88_RS08455 () | 1680501..1680815 | + | 315 | WP_000333630.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SAGV88_RS08460 () | 1680828..1681289 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| SAGV88_RS08465 () | 1681307..1681891 | + | 585 | WP_000825948.1 | hypothetical protein | - |
| SAGV88_RS08470 () | 1682121..1682267 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| SAGV88_RS08475 () | 1682264..1682878 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| SAGV88_RS08480 () | 1683004..1684209 | + | 1206 | WP_020444721.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| SAGV88_RS08485 () | 1684252..1686279 | - | 2028 | WP_001566047.1 | hypothetical protein | - |
| SAGV88_RS08490 () | 1686272..1687201 | - | 930 | WP_001548912.1 | DUF1672 domain-containing protein | - |
| SAGV88_RS08495 () | 1687446..1689197 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| SAGV88_RS08500 () | 1689178..1689903 | - | 726 | WP_000064078.1 | Regulator of RpoS | VF |
| SAGV88_RS08505 () | 1690036..1690773 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| SAGV88_RS08510 () | 1690766..1691308 | - | 543 | WP_000368653.1 | SMC-Scp complex subunit ScpB | - |
| SAGV88_RS08515 () | 1691301..1692032 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| SAGV88_RS08520 () | 1692124..1692630 | + | 507 | WP_001183429.1 | DUF309 domain-containing protein | - |
| SAGV88_RS08525 () | 1692708..1693595 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| SAGV88_RS08530 () | 1693644..1694093 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| SAGV88_RS08535 () | 1694198..1694740 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| SAGV88_RS08540 () | 1694822..1695730 | + | 909 | WP_001171351.1 | aldo/keto reductase | - |
| SAGV88_RS08545 () | 1695946..1696194 | - | 249 | WP_000995800.1 | hypothetical protein | - |
| SAGV88_RS08550 () | 1696210..1696965 | - | 756 | WP_000678232.1 | SDR family oxidoreductase | - |
| SAGV88_RS08555 () | 1697107..1697922 | + | 816 | WP_000779747.1 | pyrroline-5-carboxylate reductase | - |
| SAGV88_RS08560 () | 1698027..1698947 | - | 921 | WP_000454064.1 | ribonuclease Z | - |
| SAGV88_RS08565 () | 1699260..1700744 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| SAGV88_RS08570 () | 1700974..1701840 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
| SAGV88_RS08575 () | 1701923..1703572 | - | 1650 | WP_001041911.1 | alpha-glucosidase | - |
| SAGV88_RS08580 () | 1703588..1704607 | - | 1020 | WP_000256338.1 | LacI family DNA-binding transcriptional regulator | - |
| SAGV88_RS08585 () | 1704608..1704862 | - | 255 | WP_001791638.1 | hypothetical protein | - |
| SAGV88_RS08590 () | 1704801..1705172 | - | 372 | WP_000413437.1 | VOC family protein | - |
| SAGV88_RS08595 () | 1705391..1706797 | - | 1407 | WP_000193707.1 | NADP-dependent phosphogluconate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|