MGE detailed information
MGE type: Prophage MGE length: 41583 bp
Accession: NZ_CP012011 Location: 2061692..2103274 Organism: Staphylococcus aureus strain HC1340 Replicon: chromosome
Accession: NZ_CP012011 Location: 2061692..2103274 Organism: Staphylococcus aureus strain HC1340 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAHC1340_RS10430 () | 2057505..2058251 | - | 747 | WP_002868962.1 | S9 family peptidase | - |
| SAHC1340_RS10435 () | 2058256..2058729 | - | 474 | WP_000672014.1 | nucleoside triphosphatase YtkD | - |
| SAHC1340_RS10440 () | 2058795..2059052 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| SAHC1340_RS10445 () | 2059049..2060050 | - | 1002 | WP_042857045.1 | o-succinylbenzoate synthase | - |
| SAHC1340_RS10450 () | 2060055..2061533 | - | 1479 | WP_000348360.1 | o-succinylbenzoate--CoA ligase | - |
| SAHC1340_RS10455 () | 2061692..2062147 | - | 456 | WP_011443643.1 | DUF4909 domain-containing protein | - |
| SAHC1340_RS10460 () | 2062450..2063100 | + | 651 | WP_078102468.1 | excalibur calcium-binding domain-containing protein | - |
| SAHC1340_RS10465 () | 2063181..2064176 | + | 996 | WP_000070653.1 | DUF4352 domain-containing protein | - |
| SAHC1340_RS10470 () | 2064252..2064878 | + | 627 | WP_000669046.1 | hypothetical protein | - |
| SAHC1340_RS10475 () | 2064919..2065263 | + | 345 | WP_000627551.1 | DUF3969 family protein | - |
| SAHC1340_RS10480 () | 2065361..2065912 | + | 552 | WP_000414205.1 | hypothetical protein | - |
| SAHC1340_RS10485 () | 2066130..2066771 | - | 642 | WP_000494956.1 | ImmA/IrrE family metallo-endopeptidase | - |
| SAHC1340_RS10490 () | 2066885..2067070 | - | 186 | WP_000809857.1 | hypothetical protein | - |
| SAHC1340_RS10495 () | 2067072..2067248 | - | 177 | WP_000375476.1 | hypothetical protein | - |
| SAHC1340_RS10500 () | 2067259..2067642 | - | 384 | WP_000070811.1 | hypothetical protein | - |
| SAHC1340_RS10510 () | 2068246..2068389 | - | 144 | WP_001549059.1 | IS3 family transposase IS655 | Transposase |
| SAHC1340_RS16770 () | 2068592..2068687 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 2068715..2068774 | - | 60 | - | - | Antitoxin Detail |
| SAHC1340_RS10515 () | 2068810..2068911 | + | 102 | WP_001791893.1 | hypothetical protein | - |
| SAHC1340_RS16320 () | 2068889..2069065 | - | 177 | Protein_2038 | transposase | - |
| SAHC1340_RS10520 () | 2069259..2069636 | - | 378 | WP_001037045.1 | DUF1433 domain-containing protein | - |
| SAHC1340_RS10525 () | 2070140..2071312 | - | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| SAHC1340_RS10530 () | 2071489..2075136 | - | 3648 | Protein_2041 | ATP-binding protein | - |
| SAHC1340_RS10535 () | 2075188..2076360 | - | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| SAHC1340_RS10540 () | 2076463..2076934 | - | 472 | Protein_2043 | SMEK domain-containing protein | - |
| SAHC1340_RS10550 () | 2077784..2078983 | - | 1200 | WP_041205415.1 | restriction endonuclease subunit S | - |
| SAHC1340_RS10555 () | 2078976..2080532 | - | 1557 | WP_000028659.1 | type I restriction-modification system subunit M | - |
| SAHC1340_RS10560 () | 2080696..2080830 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| SAHC1340_RS10565 () | 2080895..2081614 | - | 720 | WP_001038688.1 | Serine protease SplF | VF |
| SAHC1340_RS10570 () | 2081765..2082481 | - | 717 | WP_001038759.1 | Serine protease SplE | VF |
| SAHC1340_RS16780 () | 2082583..2082690 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| SAHC1340_RS10575 () | 2082639..2083358 | - | 720 | WP_001038704.1 | Serine protease SplD | VF |
| SAHC1340_RS10580 () | 2083479..2084198 | - | 720 | WP_001038867.1 | Serine protease SplC | VF |
| SAHC1340_RS10585 () | 2084256..2084975 | - | 720 | WP_042857041.1 | Serine protease SplB | VF |
| SAHC1340_RS10590 () | 2085100..2085807 | - | 708 | WP_001039435.1 | Serine protease SplA | VF |
| SAHC1340_RS10600 () | 2086772..2087338 | + | 567 | WP_001092763.1 | DUF4888 domain-containing protein | - |
| SAHC1340_RS16330 () | 2087812..2088510 | - | 699 | WP_000586140.1 | hypothetical protein | - |
| SAHC1340_RS10610 () | 2088507..2089268 | - | 762 | WP_000581552.1 | lantibiotic immunity ABC transporter MutE/EpiE family permease subunit | - |
| SAHC1340_RS10615 () | 2089265..2089957 | - | 693 | WP_001096791.1 | putative ABC transporter ATP-binding protein YxlF | VF |
| SAHC1340_RS10620 () | 2089980..2091353 | - | 1374 | WP_000691541.1 | S8 family serine peptidase | - |
| SAHC1340_RS10625 () | 2091363..2091881 | - | 519 | WP_000504439.1 | flavoprotein | - |
| SAHC1340_RS10630 () | 2091897..2093141 | - | 1245 | WP_000566596.1 | lanthionine synthetase C family protein | - |
| SAHC1340_RS10635 () | 2093134..2094876 | - | 1743 | WP_001803290.1 | lantibiotic dehydratase | - |
| SAHC1340_RS10640 () | 2094941..2095084 | - | 144 | WP_000416756.1 | gallidermin/nisin family lantibiotic | - |
| SAHC1340_RS10645 () | 2095821..2095964 | - | 144 | WP_000416759.1 | gallidermin/nisin family lantibiotic | - |
| SAHC1340_RS10650 () | 2096205..2097188 | - | 984 | WP_000782464.1 | Leucotoxin LukDv | VF |
| SAHC1340_RS10655 () | 2097190..2098125 | - | 936 | WP_000473596.1 | Leucotoxin LukEv | VF |
| SAHC1340_RS10660 () | 2098925..2099464 | + | 540 | WP_001790220.1 | hypothetical protein | - |
| SAHC1340_RS10665 () | 2099477..2100265 | + | 789 | WP_000206350.1 | DUF1828 domain-containing protein | - |
| SAHC1340_RS16340 () | 2100726..2100934 | + | 209 | Protein_2068 | hypothetical protein | - |
| SAHC1340_RS10710 () | 2102720..2103274 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| SAHC1340_RS10720 () | 2103597..2104997 | - | 1401 | WP_020444748.1 | protoporphyrinogen oxidase | - |
| SAHC1340_RS10725 () | 2105021..2105944 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| SAHC1340_RS10730 () | 2106002..2107039 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| SAHC1340_RS10735 () | 2107029..2107139 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| SAHC1340_RS10740 () | 2107302..2107805 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus str. Newman | Prophage | TA10024 | NC_009641 | 1882747..1922929 | 0.002 |