MGE detailed information
MGE type: Prophage MGE length: 66737 bp
Accession: NZ_CP012011 Location: 1684583..1751319 Organism: Staphylococcus aureus strain HC1340 Replicon: chromosome
Accession: NZ_CP012011 Location: 1684583..1751319 Organism: Staphylococcus aureus strain HC1340 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAHC1340_RS08440 () | 1680657..1682036 | - | 1380 | WP_000902119.1 | ATP-dependent DNA helicase | - |
| SAHC1340_RS08445 () | 1682026..1682979 | - | 954 | WP_001163801.1 | helix-turn-helix domain-containing protein | - |
| SAHC1340_RS08450 () | 1683087..1683335 | + | 249 | WP_001151997.1 | ferredoxin | - |
| SAHC1340_RS08455 () | 1683441..1683986 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| SAHC1340_RS08460 () | 1684265..1684384 | - | 120 | WP_001789947.1 | hypothetical protein | - |
| SAHC1340_RS08465 () | 1684583..1685497 | - | 915 | WP_000913219.1 | DUF1672 domain-containing protein | - |
| SAHC1340_RS08470 () | 1685512..1685718 | - | 207 | WP_001033757.1 | hypothetical protein | - |
| SAHC1340_RS08475 () | 1685711..1686649 | - | 939 | WP_020444682.1 | DUF1672 domain-containing protein | - |
| SAHC1340_RS08480 () | 1686707..1687624 | - | 918 | WP_000476873.1 | DUF1672 domain-containing protein | - |
| SAHC1340_RS08485 () | 1687715..1687900 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| SAHC1340_RS08490 () | 1688176..1688733 | - | 558 | WP_000528632.1 | hypothetical protein | - |
| SAHC1340_RS08495 () | 1689388..1690842 | - | 1455 | WP_042857060.1 | N-acetylmuramoyl-L-alanine amidase | - |
| SAHC1340_RS08500 () | 1690853..1691155 | - | 303 | WP_000339141.1 | phage holin | - |
| SAHC1340_RS08505 () | 1691291..1691590 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| SAHC1340_RS08510 () | 1691636..1691800 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| SAHC1340_RS08515 () | 1691793..1692182 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| SAHC1340_RS08520 () | 1692182..1693648 | - | 1467 | WP_020444680.1 | BppU family phage baseplate upper protein | - |
| SAHC1340_RS08525 () | 1693648..1695558 | - | 1911 | WP_000429552.1 | hypothetical protein | - |
| SAHC1340_RS08530 () | 1695574..1695864 | - | 291 | WP_000179860.1 | hypothetical protein | - |
| SAHC1340_RS08535 () | 1695864..1697447 | - | 1584 | WP_000384462.1 | prophage endopeptidase tail family protein | - |
| SAHC1340_RS08540 () | 1697456..1698280 | - | 825 | WP_020444679.1 | phage tail family protein | - |
| SAHC1340_RS08545 () | 1698280..1704480 | - | 6201 | WP_020444678.1 | phage tail tape measure protein | - |
| SAHC1340_RS08550 () | 1704494..1704652 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| SAHC1340_RS08555 () | 1704703..1705044 | - | 342 | WP_000589166.1 | hypothetical protein | - |
| SAHC1340_RS08560 () | 1705102..1705557 | - | 456 | WP_020444677.1 | Ig domain-containing protein | - |
| SAHC1340_RS08565 () | 1705649..1706290 | - | 642 | WP_000807540.1 | tail protein | - |
| SAHC1340_RS08570 () | 1706325..1706720 | - | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| SAHC1340_RS08575 () | 1706721..1707122 | - | 402 | WP_000110020.1 | hypothetical protein | - |
| SAHC1340_RS08580 () | 1707119..1707451 | - | 333 | WP_000395501.1 | hypothetical protein | - |
| SAHC1340_RS08585 () | 1707463..1707741 | - | 279 | WP_000050975.1 | head-tail connector protein | - |
| SAHC1340_RS08590 () | 1707810..1708973 | - | 1164 | WP_001142735.1 | phage major capsid protein | - |
| SAHC1340_RS08595 () | 1708985..1709758 | - | 774 | WP_021187674.1 | Clp protease ClpP | - |
| SAHC1340_RS08600 () | 1709742..1710980 | - | 1239 | WP_020444675.1 | phage portal protein | - |
| SAHC1340_RS08605 () | 1710985..1712676 | - | 1692 | WP_020444674.1 | terminase large subunit | - |
| SAHC1340_RS08610 () | 1712666..1712971 | - | 306 | WP_020444673.1 | P27 family phage terminase small subunit | - |
| SAHC1340_RS08615 () | 1713097..1713417 | - | 321 | WP_000166257.1 | HNH endonuclease | - |
| SAHC1340_RS08620 () | 1713578..1714015 | - | 438 | WP_000513704.1 | transcriptional regulator | - |
| SAHC1340_RS08625 () | 1714028..1715395 | - | 1368 | WP_078066180.1 | DEAD/DEAH box helicase | - |
| SAHC1340_RS08630 () | 1715376..1715666 | - | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| SAHC1340_RS08635 () | 1715800..1715904 | + | 105 | WP_011447017.1 | hypothetical protein | - |
| SAHC1340_RS08640 () | 1716007..1718454 | - | 2448 | WP_020444670.1 | virulence-associated E family protein | - |
| SAHC1340_RS08645 () | 1718506..1718706 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| SAHC1340_RS08650 () | 1718774..1718926 | - | 153 | WP_000237866.1 | transcriptional activator RinB | - |
| SAHC1340_RS08655 () | 1718929..1719129 | - | 201 | WP_001125015.1 | hypothetical protein | - |
| SAHC1340_RS08660 () | 1719104..1719292 | - | 189 | WP_000195789.1 | DUF1381 domain-containing protein | - |
| SAHC1340_RS08665 () | 1719309..1719482 | - | 174 | WP_001209219.1 | hypothetical protein | - |
| SAHC1340_RS08670 () | 1719519..1720053 | - | 535 | Protein_1677 | dUTP pyrophosphatase | - |
| SAHC1340_RS08675 () | 1720046..1720294 | - | 249 | WP_031782730.1 | DUF1024 family protein | - |
| SAHC1340_RS08680 () | 1720287..1720595 | - | 309 | WP_001668981.1 | hypothetical protein | - |
| SAHC1340_RS08685 () | 1720592..1720939 | - | 348 | WP_000979209.1 | hypothetical protein | - |
| SAHC1340_RS08690 () | 1720936..1721340 | - | 405 | WP_020444668.1 | hypothetical protein | - |
| SAHC1340_RS08695 () | 1721353..1721601 | - | 249 | WP_072466103.1 | hypothetical protein | - |
| SAHC1340_RS08700 () | 1721601..1721855 | - | 255 | WP_031782732.1 | DUF3310 domain-containing protein | - |
| SAHC1340_RS08705 () | 1721855..1722256 | - | 402 | WP_031782733.1 | phage DNA polymerase | - |
| SAHC1340_RS08710 () | 1722256..1722441 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| SAHC1340_RS08715 () | 1722454..1724406 | - | 1953 | WP_001796208.1 | DNA polymerase | - |
| SAHC1340_RS08720 () | 1724475..1725032 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| SAHC1340_RS08725 () | 1725058..1726224 | - | 1167 | WP_000762547.1 | DUF2800 domain-containing protein | - |
| SAHC1340_RS08730 () | 1726221..1726583 | - | 363 | WP_000985984.1 | hypothetical protein | - |
| SAHC1340_RS08735 () | 1726598..1726921 | - | 324 | WP_000175001.1 | hypothetical protein | - |
| SAHC1340_RS08740 () | 1727000..1727161 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| SAHC1340_RS08745 () | 1727174..1727437 | - | 264 | WP_001124160.1 | IS3 family transposase ISVa4 | Transposase |
| SAHC1340_RS08750 () | 1727462..1727677 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| SAHC1340_RS08755 () | 1727732..1728097 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| SAHC1340_RS08760 () | 1728066..1728311 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| SAHC1340_RS08765 () | 1728367..1728576 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| SAHC1340_RS08770 () | 1728566..1728709 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| SAHC1340_RS08775 () | 1728738..1729514 | - | 777 | WP_031886646.1 | Rha family transcriptional regulator | - |
| SAHC1340_RS08780 () | 1729528..1729773 | - | 246 | WP_001573844.1 | helix-turn-helix domain-containing protein | - |
| SAHC1340_RS08785 () | 1729965..1730294 | + | 330 | WP_001573842.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SAHC1340_RS08790 () | 1730307..1730768 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| SAHC1340_RS08795 () | 1730786..1731370 | + | 585 | WP_000825948.1 | hypothetical protein | - |
| SAHC1340_RS08800 () | 1731600..1731746 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| SAHC1340_RS08805 () | 1731743..1732357 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| SAHC1340_RS08810 () | 1732483..1733688 | + | 1206 | WP_020444721.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| SAHC1340_RS08815 () | 1733731..1735758 | - | 2028 | WP_001566047.1 | hypothetical protein | - |
| SAHC1340_RS08820 () | 1735751..1736680 | - | 930 | WP_001548912.1 | DUF1672 domain-containing protein | - |
| SAHC1340_RS08825 () | 1736925..1738676 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| SAHC1340_RS08830 () | 1738657..1739382 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| SAHC1340_RS08835 () | 1739515..1740252 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| SAHC1340_RS08840 () | 1740245..1740787 | - | 543 | WP_000368653.1 | SMC-Scp complex subunit ScpB | - |
| SAHC1340_RS08845 () | 1740780..1741511 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| SAHC1340_RS08850 () | 1741603..1742109 | + | 507 | WP_001183429.1 | DUF309 domain-containing protein | - |
| SAHC1340_RS08855 () | 1742187..1743074 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| SAHC1340_RS08860 () | 1743123..1743572 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| SAHC1340_RS08865 () | 1743677..1744219 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| SAHC1340_RS08870 () | 1744301..1745209 | + | 909 | WP_001171351.1 | aldo/keto reductase | - |
| SAHC1340_RS08875 () | 1745425..1745673 | - | 249 | WP_000995800.1 | hypothetical protein | - |
| SAHC1340_RS08880 () | 1745689..1746444 | - | 756 | WP_000678232.1 | SDR family oxidoreductase | - |
| SAHC1340_RS08885 () | 1746586..1747401 | + | 816 | WP_000779747.1 | pyrroline-5-carboxylate reductase | - |
| SAHC1340_RS08890 () | 1747506..1748426 | - | 921 | WP_000454064.1 | ribonuclease Z | - |
| SAHC1340_RS08895 () | 1748739..1750223 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| SAHC1340_RS08900 () | 1750453..1751319 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
| SAHC1340_RS08905 () | 1751402..1753051 | - | 1650 | WP_001041911.1 | alpha-glucosidase | - |
| SAHC1340_RS08910 () | 1753067..1754086 | - | 1020 | WP_000256338.1 | LacI family DNA-binding transcriptional regulator | - |
| SAHC1340_RS08915 () | 1754087..1754341 | - | 255 | WP_001791638.1 | hypothetical protein | - |
| SAHC1340_RS08920 () | 1754280..1754651 | - | 372 | WP_000413437.1 | VOC family protein | - |
| SAHC1340_RS08925 () | 1754870..1756276 | - | 1407 | WP_000193707.1 | NADP-dependent phosphogluconate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|