MGE detailed information
MGE type: Prophage MGE length: 12066 bp
Accession: NZ_CP011938 Location: 1396595..1408660 Organism: Escherichia coli strain C43(DE3) Replicon: chromosome
Accession: NZ_CP011938 Location: 1396595..1408660 Organism: Escherichia coli strain C43(DE3) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TZ57_RS07040 () | 1392645..1393628 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| TZ57_RS07050 () | 1394106..1395479 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| TZ57_RS07055 () | 1395608..1396543 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| TZ57_RS22925 () | 1396595..1397830 | - | 1236 | WP_000040858.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| TZ57_RS07065 () | 1397832..1398047 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| TZ57_RS07070 () | 1398126..1398335 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 1398151..1398329 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1398151..1398329 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1398151..1398329 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1398151..1398329 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| TZ57_RS07075 () | 1398328..1398522 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| TZ57_RS07080 () | 1398579..1399388 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| TZ57_RS07085 () | 1399381..1400480 | - | 1100 | Protein_1349 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| TZ57_RS07090 () | 1400582..1400857 | - | 276 | WP_000632297.1 | protein RacC | - |
| TZ57_RS07095 () | 1400932..1401102 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| TZ57_RS07100 () | 1401102..1401323 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| TZ57_RS07105 () | 1401765..1402253 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| TZ57_RS22300 () | 1402250..1402405 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| TZ57_RS07110 () | 1402549..1402761 | + | 213 | WP_012775985.1 | phage lysis protein EssD | - |
| TZ57_RS07115 () | 1402766..1403110 | + | 345 | WP_000193293.1 | YdfR family protein | - |
| TZ57_RS07120 () | 1403076..1403348 | - | 273 | WP_000370546.1 | hypothetical protein | - |
| TZ57_RS07125 () | 1403454..1403987 | + | 534 | WP_000992105.1 | lysozyme | - |
| TZ57_RS24320 () | 1404204..1404389 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| TZ57_RS07135 () | 1404586..1406043 | + | 1458 | WP_001097897.1 | Trk system potassium transporter TrkG | - |
| TZ57_RS07140 () | 1406181..1406576 | + | 396 | WP_012775984.1 | ParB/Srx family N-terminal domain-containing protein | - |
| TZ57_RS24325 () | 1406548..1407261 | + | 714 | Protein_1362 | hypothetical protein | - |
| TZ57_RS07150 () | 1407258..1407536 | + | 279 | WP_000654171.1 | hypothetical protein | - |
| TZ57_RS07155 () | 1407549..1407842 | + | 294 | WP_000355360.1 | hypothetical protein | - |
| TZ57_RS07160 () | 1407862..1407972 | + | 111 | Protein_1365 | tail fiber assembly protein | - |
| TZ57_RS07165 () | 1408070..1408660 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| TZ57_RS07170 () | 1408977..1409210 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| TZ57_RS24815 () | 1409279..1409392 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| TZ57_RS25085 () | 1409732..1409905 | + | 174 | WP_001157925.1 | hypothetical protein | - |
| TZ57_RS07175 () | 1410171..1410605 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| TZ57_RS07180 () | 1410746..1411879 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli strain BL21 (TaKaRa) | Prophage | TA52902 | NZ_CP010816 | 1366333..1378398 | 0 |