MGE detailed information
MGE type: Genomic_island MGE length: 26522 bp
Accession: NZ_CP011827 Location: 2809320..2835841 Organism: Xanthomonas citri pv. citri strain jx-6 Replicon: chromosome
Accession: NZ_CP011827 Location: 2809320..2835841 Organism: Xanthomonas citri pv. citri strain jx-6 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB890_RS12290 () | 2806242..2806418 | - | 177 | WP_011051567.1 | DUF3606 domain-containing protein | - |
| AB890_RS12295 () | 2806638..2807039 | + | 402 | WP_003485983.1 | H-NS histone family protein | - |
| AB890_RS12305 () | 2807328..2808419 | + | 1092 | WP_015463304.1 | site-specific integrase | - |
| AB890_RS12315 () | 2809320..2811491 | + | 2172 | WP_011051569.1 | DotA/TraY family protein | - |
| AB890_RS12320 () | 2811501..2812022 | + | 522 | WP_011051570.1 | hypothetical protein | - |
| AB890_RS12325 () | 2812950..2813318 | + | 369 | WP_015472110.1 | hypothetical protein | - |
| AB890_RS23310 () | 2813425..2813618 | - | 194 | Protein_2399 | hypothetical protein | - |
| AB890_RS12330 () | 2813910..2815043 | - | 1134 | Protein_2400 | IS5 family transposase ISXo4 | Transposase |
| AB890_RS12335 () | 2815083..2816170 | - | 1088 | Protein_2401 | IS3 family transposase ISXcd1 | Transposase |
| AB890_RS12345 () | 2816383..2816562 | - | 180 | WP_015463309.1 | hypothetical protein | - |
| AB890_RS12350 () | 2816833..2817153 | - | 321 | WP_099522003.1 | hypothetical protein | - |
| AB890_RS12355 () | 2817150..2817440 | - | 291 | WP_011051576.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AB890_RS12360 () | 2817428..2817706 | - | 279 | WP_004541313.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| AB890_RS12365 () | 2817876..2819144 | - | 1269 | Protein_2406 | Tn3 family transposase ISPsy42 | Transposase |
| AB890_RS12375 () | 2819193..2820418 | + | 1226 | Protein_2407 | IS3 family transposase ISJsp1 | Transposase |
| AB890_RS12380 () | 2821055..2821993 | + | 939 | WP_044022138.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| AB890_RS12385 () | 2822183..2824291 | + | 2109 | WP_047930108.1 | AAA family ATPase | - |
| AB890_RS12390 () | 2824342..2824530 | + | 189 | WP_011051582.1 | hypothetical protein | - |
| AB890_RS12395 () | 2824527..2826113 | + | 1587 | WP_011051583.1 | N-6 DNA methylase | - |
| AB890_RS12400 () | 2826110..2827027 | + | 918 | WP_011051584.1 | XamI family restriction endonuclease | - |
| AB890_RS12405 () | 2827036..2827365 | + | 330 | WP_015463316.1 | hypothetical protein | - |
| AB890_RS12410 () | 2827469..2827879 | + | 411 | WP_015472117.1 | plasmid pRiA4b ORF-3 family protein | - |
| AB890_RS23315 () | 2827902..2828296 | - | 395 | Protein_2415 | relaxase | - |
| AB890_RS23320 () | 2828271..2828471 | - | 201 | WP_011051587.1 | ribbon-helix-helix protein, CopG family | - |
| AB890_RS12420 () | 2829032..2829292 | + | 261 | WP_015463320.1 | hypothetical protein | - |
| AB890_RS12425 () | 2829691..2830692 | - | 1002 | WP_011051588.1 | replication protein | - |
| AB890_RS12430 () | 2830925..2831158 | + | 234 | WP_040107635.1 | hypothetical protein | - |
| AB890_RS12435 () | 2831737..2833131 | + | 1395 | WP_047930020.1 | SIR2 family protein | - |
| AB890_RS12440 () | 2833128..2835245 | + | 2118 | WP_015463321.1 | ATP-binding protein | - |
| AB890_RS25170 () | 2835665..2835841 | + | 177 | WP_003485979.1 | hypothetical protein | - |
| AB890_RS12450 () | 2836124..2837230 | + | 1107 | WP_016849926.1 | diguanylate cyclase | - |
| AB890_RS12455 () | 2837273..2837782 | - | 510 | WP_011051594.1 | chemotaxis protein CheW | - |
| AB890_RS12460 () | 2837794..2839452 | - | 1659 | WP_011051595.1 | MCP four helix bundle domain-containing protein | - |
| AB890_RS12465 () | 2839763..2840368 | + | 606 | WP_170914521.1 | DNA-3-methyladenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xanthomonas axonopodis pv. citri str. 306 | Genomic island | TA20720 | NC_003919 | 2820490..2847010 | 0.001 |