MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 104368 bp
Accession: NZ_CP011809 Location: 1..104368 Organism: Pandoraea faecigallinarum strain DSM 23572 Replicon: plasmid pPF72-2
Accession: NZ_CP011809 Location: 1..104368 Organism: Pandoraea faecigallinarum strain DSM 23572 Replicon: plasmid pPF72-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB870_RS24870 () | 597..1455 | + | 859 | Protein_1 | Type IV secretion system protein virB9 | VF |
| AB870_RS24875 () | 1457..2677 | + | 1221 | WP_047909476.1 | Type IV secretion system protein virB10 | VF |
| AB870_RS24880 () | 2688..3710 | + | 1023 | WP_047909477.1 | Type IV secretion system protein VirB11 | VF |
| AB870_RS24885 () | 3778..4743 | + | 966 | WP_047909518.1 | Type IV secretion system protein virB1 | VF |
| AB870_RS24890 () | 4804..5418 | + | 615 | WP_047909478.1 | hypothetical protein | - |
| AB870_RS24895 () | 5474..6055 | + | 582 | WP_047909479.1 | Phospholipase D | VF |
| AB870_RS24900 () | 6119..7681 | + | 1563 | WP_047909480.1 | type IV secretion system DNA-binding domain-containing protein | - |
| AB870_RS24905 () | 7692..10670 | + | 2979 | WP_047909481.1 | Multifunctional conjugation protein TraI | Relaxase |
| AB870_RS26125 () | 11057..11511 | + | 455 | Protein_9 | conjugal transfer protein TraD | - |
| AB870_RS24910 () | 11645..12664 | + | 1020 | WP_047909179.1 | IS110 family transposase IS884 | Transposase |
| AB870_RS24915 () | 12858..13913 | - | 1056 | WP_047906141.1 | IS481 family transposase ISGdi10 | Transposase |
| AB870_RS24920 () | 14169..14873 | + | 705 | WP_047909482.1 | hypothetical protein | - |
| AB870_RS24925 () | 14922..15275 | + | 354 | WP_047909519.1 | hypothetical protein | - |
| AB870_RS24930 () | 15362..15595 | - | 234 | WP_047909483.1 | hypothetical protein | - |
| AB870_RS24935 () | 15779..16834 | + | 1056 | WP_047906141.1 | IS481 family transposase ISGdi10 | Transposase |
| AB870_RS24940 () | 17288..17500 | - | 213 | WP_047909484.1 | IS5 family transposase ISCARN8 | Transposase |
| AB870_RS24945 () | 17796..18074 | + | 279 | WP_047909485.1 | IS630 family transposase ISCARN44 | Transposase |
| AB870_RS24950 () | 18159..19727 | + | 1569 | WP_157112545.1 | hypothetical protein | - |
| AB870_RS24955 () | 19834..20568 | + | 735 | WP_047909487.1 | IS6 family transposase ISApr5 | Transposase |
| AB870_RS24960 () | 20626..21153 | - | 528 | Protein_20 | DUF945 domain-containing protein | - |
| AB870_RS24965 () | 21958..22194 | + | 237 | WP_047909488.1 | hypothetical protein | - |
| AB870_RS24970 () | 22385..23125 | + | 741 | WP_064674971.1 | 2OG-Fe(II) oxygenase | - |
| AB870_RS24975 () | 23205..24107 | + | 903 | WP_047909491.1 | methyltransferase domain-containing protein | - |
| AB870_RS26875 () | 24885..25181 | + | 297 | WP_167362763.1 | hypothetical protein | - |
| AB870_RS26135 () | 26545..27389 | - | 845 | Protein_26 | IS3 family transposase ISButh2 | Transposase |
| AB870_RS25005 () | 27522..29489 | - | 1968 | WP_047909493.1 | hypothetical protein | - |
| AB870_RS25010 () | 29845..30108 | - | 264 | WP_047909494.1 | DUF2274 domain-containing protein | - |
| AB870_RS26140 () | 30168..30966 | + | 799 | WP_157112220.1 | IS5 family transposase ISAzo37 | Transposase |
| AB870_RS25025 () | 30975..31418 | - | 444 | WP_047909495.1 | hypothetical protein | - |
| AB870_RS25030 () | 31500..32237 | + | 738 | WP_047909496.1 | IS6 family transposase ISBj7 | Transposase |
| AB870_RS25035 () | 32294..32734 | + | 441 | Protein_32 | IS3 family transposase ISRso10 | Transposase |
| AB870_RS26145 () | 32814..32927 | + | 114 | Protein_33 | IS3 family transposase | - |
| AB870_RS25045 () | 33755..36007 | + | 2253 | WP_047909497.1 | hypothetical protein | - |
| AB870_RS25050 () | 36937..38112 | - | 1176 | WP_157112546.1 | hypothetical protein | - |
| AB870_RS25060 () | 38342..39481 | + | 1140 | Protein_36 | Tn3 family transposase TnpA_ISAcsp1 | Transposase |
| AB870_RS25065 () | 39490..40326 | + | 837 | Protein_37 | Type IV secretion system protein VirB11 | VF |
| AB870_RS25070 () | 40411..41148 | - | 738 | WP_047909496.1 | IS6 family transposase ISBj7 | Transposase |
| AB870_RS25075 () | 41420..41710 | + | 291 | WP_047909499.1 | hypothetical protein | - |
| AB870_RS25080 () | 41707..41991 | + | 285 | WP_047909500.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| AB870_RS26150 () | 42153..42951 | + | 799 | WP_167362764.1 | IS5 family transposase ISAzo37 | Transposase |
| AB870_RS25095 () | 42982..43251 | + | 270 | WP_047909502.1 | hypothetical protein | - |
| AB870_RS25100 () | 43887..44672 | - | 786 | Protein_43 | IS21 family transposase ISGur8 | Transposase |
| AB870_RS25105 () | 44653..46149 | - | 1497 | Protein_44 | IS21 family transposase ISGur8 | Transposase |
| AB870_RS25110 () | 46297..46713 | - | 417 | Protein_45 | IS30 family transposase ISPa37 | Transposase |
| AB870_RS25115 () | 46770..47330 | - | 561 | Protein_46 | IS6 family transposase ISEas1 | Transposase |
| AB870_RS25120 () | 47386..48121 | - | 736 | Protein_47 | IS6 family transposase ISBj7 | Transposase |
| AB870_RS25125 () | 48466..49434 | - | 969 | WP_071386935.1 | hypothetical protein | - |
| AB870_RS26160 () | 49506..50322 | - | 817 | Protein_49 | IS5 family transposase | - |
| AB870_RS25135 () | 50670..51467 | - | 798 | WP_047907355.1 | IS21 family transposase ISPa65 | Transposase |
| AB870_RS25140 () | 51460..52965 | - | 1506 | WP_047908873.1 | IS21 family transposase ISAlisp1 | Transposase |
| AB870_RS25145 () | 53141..53587 | - | 447 | Protein_52 | IS481 family transposase ISGdi10 | Transposase |
| AB870_RS25150 () | 53937..55817 | - | 1881 | WP_047909438.1 | metallophosphoesterase | - |
| AB870_RS25155 () | 56340..57072 | + | 733 | Protein_54 | IS6 family transposase ISRsp9 | Transposase |
| AB870_RS26165 () | 57202..58019 | + | 818 | Protein_55 | IS5 family transposase | - |
| AB870_RS25165 () | 58151..59185 | - | 1035 | WP_047906187.1 | IS630 family transposase ISAzo32 | Transposase |
| AB870_RS25170 () | 59561..60787 | + | 1227 | WP_174554750.1 | Sporulation initiation inhibitor protein Soj | VF |
| AB870_RS25175 () | 60784..61803 | + | 1020 | WP_053059786.1 | ParB N-terminal domain-containing protein | - |
| AB870_RS25180 () | 62117..63469 | + | 1353 | WP_053059787.1 | hypothetical protein | - |
| AB870_RS25185 () | 63992..64321 | - | 330 | WP_047909440.1 | type II toxin-antitoxin system YafQ family toxin | - |
| AB870_RS25190 () | 64293..64556 | - | 264 | WP_174554751.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| AB870_RS25195 () | 65015..65758 | + | 744 | WP_047909442.1 | IS6 family transposase ISBj7 | Transposase |
| AB870_RS25200 () | 65884..66621 | + | 738 | WP_047909443.1 | IS6 family transposase ISBj7 | Transposase |
| AB870_RS26170 () | 66698..66922 | + | 225 | Protein_64 | IS30 family transposase | - |
| AB870_RS25205 () | 66932..67210 | - | 279 | Protein_65 | IS3 family transposase IS1416 | Transposase |
| AB870_RS25210 () | 67536..68504 | - | 969 | WP_047909445.1 | hypothetical protein | - |
| AB870_RS26690 () | 68479..68787 | - | 309 | WP_157112549.1 | hypothetical protein | - |
| AB870_RS25220 () | 69297..69606 | + | 310 | Protein_68 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AB870_RS25225 () | 69593..69907 | + | 315 | WP_047909447.1 | helix-turn-helix domain-containing protein | - |
| AB870_RS25230 () | 70309..71043 | - | 735 | WP_047909448.1 | IS6 family transposase ISApr5 | Transposase |
| AB870_RS25235 () | 71160..71570 | - | 411 | Protein_71 | IS6 family transposase ISYps1 | Transposase |
| AB870_RS26695 () | 71632..71799 | - | 168 | Protein_72 | IS6 family transposase ISRsp9 | Transposase |
| AB870_RS25245 () | 72740..73366 | - | 627 | WP_157112551.1 | hypothetical protein | - |
| AB870_RS26700 () | 73320..73724 | - | 405 | WP_157112552.1 | IS6 family transposase ISApr5 | Transposase |
| AB870_RS26180 () | 73755..74489 | + | 735 | WP_084664397.1 | IS6 family transposase ISApr5 | Transposase |
| AB870_RS25265 () | 75227..75604 | + | 378 | WP_047909453.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AB870_RS25270 () | 75585..75920 | + | 336 | WP_047909454.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| AB870_RS26880 () | 76040..76369 | + | 330 | Protein_79 | hypothetical protein | - |
| AB870_RS25275 () | 76921..77999 | + | 1079 | Protein_80 | IS256 family transposase IS1090 | Transposase |
| AB870_RS25280 () | 78007..79242 | - | 1236 | WP_047909156.1 | IS110 family transposase ISMch4 | Transposase |
| AB870_RS25285 () | 79489..79698 | + | 210 | Protein_82 | IS256 family transposase IS1090 | Transposase |
| AB870_RS25290 () | 79771..80400 | - | 630 | WP_084664403.1 | hypothetical protein | - |
| AB870_RS25295 () | 80418..81542 | - | 1125 | WP_047909512.1 | J domain-containing protein | - |
| AB870_RS25300 () | 81770..83449 | + | 1680 | WP_047909456.1 | tyrosine-type recombinase/integrase | - |
| AB870_RS25305 () | 83446..83868 | + | 423 | Protein_86 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| AB870_RS25310 () | 83912..84655 | + | 744 | WP_047909458.1 | IS6 family transposase ISBj7 | Transposase |
| AB870_RS26195 () | 84717..84845 | - | 129 | Protein_88 | single-stranded DNA-binding protein | - |
| AB870_RS25315 () | 84995..85636 | - | 642 | WP_047909459.1 | hypothetical protein | - |
| AB870_RS25320 () | 85633..85974 | - | 342 | WP_047909460.1 | hypothetical protein | - |
| AB870_RS25325 () | 86266..86562 | + | 297 | WP_047909461.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| AB870_RS25330 () | 86565..86966 | + | 402 | WP_047909513.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| AB870_RS26710 () | 87187..87429 | - | 243 | Protein_93 | IS6 family transposase ISBj7 | Transposase |
| AB870_RS25340 () | 87480..88217 | + | 738 | WP_047909443.1 | IS6 family transposase ISBj7 | Transposase |
| AB870_RS25345 () | 88352..90481 | - | 2130 | WP_047909462.1 | TonB-dependent copper receptor | - |
| AB870_RS25350 () | 90567..90947 | - | 381 | WP_047909463.1 | DUF2946 domain-containing protein | - |
| AB870_RS26200 () | 91553..91882 | + | 330 | WP_084664399.1 | recombinase family protein | - |
| AB870_RS25355 () | 91834..93396 | - | 1563 | WP_047909515.1 | IS66 family transposase ISAeh1 | Transposase |
| AB870_RS25360 () | 93428..93778 | - | 351 | WP_047909464.1 | IS66 family transposase ISRm2 | Transposase |
| AB870_RS25365 () | 93754..94194 | - | 441 | WP_047909163.1 | IS66 family transposase ISRtr5 | Transposase |
| AB870_RS25370 () | 94280..94743 | + | 464 | Protein_101 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| AB870_RS25375 () | 95032..95838 | - | 807 | WP_047909465.1 | Transcriptional regulatory protein UhpA | VF |
| AB870_RS25380 () | 95880..96470 | - | 591 | WP_047909466.1 | thiamine phosphate synthase | - |
| AB870_RS25385 () | 96472..97833 | - | 1362 | WP_064674973.1 | MFS transporter | - |
| AB870_RS25390 () | 98014..98289 | - | 276 | WP_047909467.1 | Arc family DNA-binding protein | - |
| AB870_RS25395 () | 98689..99069 | + | 381 | WP_047909468.1 | TrbC/VirB2 family protein | - |
| AB870_RS25400 () | 99066..99365 | + | 300 | WP_047909469.1 | VirB3 family type IV secretion system protein | - |
| AB870_RS25405 () | 99388..102048 | + | 2661 | WP_047909517.1 | Type IV secretion system protein virB4 | VF |
| AB870_RS25410 () | 102045..102725 | + | 681 | WP_047909470.1 | hypothetical protein | - |
| AB870_RS25415 () | 102772..102981 | + | 210 | WP_047909471.1 | hypothetical protein | - |
| AB870_RS25420 () | 102974..103372 | + | 399 | WP_071386938.1 | hypothetical protein | - |
| AB870_RS25425 () | 103374..104231 | + | 858 | WP_047909473.1 | type IV secretion system protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|