MGE detailed information
MGE type: Prophage MGE length: 20423 bp
Accession: NZ_CP011495 Location: 2885760..2906182 Organism: Escherichia coli strain NCM3722 isolate K-12 Replicon: chromosome
Accession: NZ_CP011495 Location: 2885760..2906182 Organism: Escherichia coli strain NCM3722 isolate K-12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AA953_RS14320 () | 2881353..2881556 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| AA953_RS14325 () | 2881591..2883051 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| AA953_RS14330 () | 2883140..2884507 | - | 1368 | Protein_2704 | MHS family MFS transporter | - |
| AA953_RS26530 () | 2885028..2885141 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| AA953_RS14335 () | 2885210..2885443 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| AA953_RS14340 () | 2885760..2886350 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| AA953_RS14345 () | 2886448..2887023 | - | 576 | WP_001698950.1 | tail fiber assembly protein | - |
| AA953_RS14350 () | 2887023..2887985 | - | 963 | WP_001027733.1 | phage tail protein | - |
| AA953_RS14355 () | 2887936..2888505 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| AA953_RS14360 () | 2888894..2889127 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| AA953_RS14365 () | 2889185..2889595 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| AA953_RS14370 () | 2889747..2889920 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| AA953_RS14375 () | 2890092..2890247 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| AA953_RS26535 () | 2890326..2890391 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| AA953_RS24950 () | 2890394..2890582 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| AA953_RS14380 () | 2890593..2890805 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| AA953_RS14385 () | 2891168..2891665 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| AA953_RS14390 () | 2891662..2892195 | - | 534 | WP_001092971.1 | lysozyme | - |
| AA953_RS14395 () | 2892192..2892503 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| AA953_RS14400 () | 2892508..2892723 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| AA953_RS14405 () | 2893477..2893692 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| AA953_RS14410 () | 2893993..2894205 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| AA953_RS26540 () | 2894260..2894349 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| AA953_RS14415 () | 2894627..2895379 | - | 753 | WP_001047135.1 | antitermination protein | - |
| AA953_RS14420 () | 2895393..2896442 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| AA953_RS14425 () | 2896444..2896722 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| AA953_RS14430 () | 2896789..2897040 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| AA953_RS14435 () | 2897257..2897412 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| AA953_RS14440 () | 2897484..2897771 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| AA953_RS14445 () | 2897771..2898010 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| AA953_RS24955 () | 2898035..2898340 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| AA953_RS14450 () | 2898543..2898875 | + | 333 | WP_001301033.1 | protein FlxA | - |
| AA953_RS23740 () | 2899312..2899461 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| AA953_RS14455 () | 2899496..2899774 | - | 279 | Protein_2735 | hypothetical protein | - |
| AA953_RS14460 () | 2899758..2899988 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| AA953_RS14465 () | 2900072..2900479 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| AA953_RS14470 () | 2900646..2900801 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| AA953_RS14475 () | 2900961..2901179 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| AA953_RS14485 () | 2901747..2901935 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| AA953_RS14490 () | 2901932..2902123 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| AA953_RS14495 () | 2902216..2902983 | + | 768 | Protein_2742 | exonuclease | - |
| AA953_RS26550 () | 2902980..2903486 | + | 507 | Protein_2743 | IS3 family transposase IS2 | Transposase |
| AA953_RS14515 () | 2904814..2905011 | + | 198 | Protein_2745 | IS3 family transposase IS2 | Transposase |
| AA953_RS26555 () | 2905025..2906182 | + | 1158 | Protein_2746 | Putative defective protein IntQ ; Integrase | Integrase |
| AA953_RS25990 () | 2906202..2906312 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| AA953_RS14525 () | 2906370..2907389 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| AA953_RS14530 () | 2907401..2908615 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| AA953_RS14535 () | 2908821..2909147 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| AA953_RS14540 () | 2909282..2909623 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| AA953_RS14545 () | 2909658..2910218 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| AA953_RS14550 () | 2910221..2910931 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.005 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0.003 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.005 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0.003 |