MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 47606 bp
Accession: NZ_CP011418 Location: 1..47606 Organism: Escherichia coli strain CFSAN029787 Replicon: plasmid pCFSAN029787_02
Accession: NZ_CP011418 Location: 1..47606 Organism: Escherichia coli strain CFSAN029787 Replicon: plasmid pCFSAN029787_02
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AA102_RS31430 () | 188..493 | - | 306 | WP_046881824.1 | hypothetical protein | - |
| AA102_RS26815 () | 507..1064 | - | 558 | WP_000139329.1 | fertility inhibition protein FinO | - |
| AA102_RS26820 () | 1119..1865 | - | 747 | WP_000205709.1 | conjugal transfer pilus acetylase TraX | - |
| AA102_RS26825 () | 1885..7155 | - | 5271 | WP_001545323.1 | Multifunctional conjugation protein TraI | Relaxase |
| AA102_RS26830 () | 7155..9443 | - | 2289 | WP_021561472.1 | Coupling protein TraD | VF |
| AA102_RS26835 () | 9514..11085 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| AA102_RS26840 () | 11105..11452 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| AA102_RS26845 () | 11452..12129 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| AA102_RS26850 () | 12213..12674 | - | 462 | WP_046881848.1 | DUF1380 family protein | - |
| AA102_RS26855 () | 12674..12976 | - | 303 | WP_001364029.1 | antirestriction protein | - |
| AA102_RS26860 () | 13525..14715 | - | 1191 | WP_046881606.1 | IS4 family transposase ISEc60 | Transposase |
| AA102_RS26865 () | 14818..15588 | - | 771 | WP_001044390.1 | hypothetical protein | - |
| AA102_RS26870 () | 15633..16067 | - | 435 | WP_000274451.1 | DUF1380 family protein | - |
| AA102_RS26875 () | 16081..16302 | - | 222 | WP_001104892.1 | hypothetical protein | - |
| AA102_RS26880 () | 16303..16986 | - | 684 | WP_000086171.1 | DNA methylase | - |
| AA102_RS30365 () | 17062..17373 | - | 312 | WP_001309256.1 | hypothetical protein | - |
| AA102_RS31435 () | 17437..17796 | - | 360 | WP_001336695.1 | DUF1281 domain-containing protein | - |
| AA102_RS31010 () | 17803..17946 | - | 144 | WP_000270807.1 | DUF1281 domain-containing protein | - |
| AA102_RS29415 () | 18113..18889 | - | 777 | Protein_18 | hypothetical protein | - |
| AA102_RS26900 () | 19123..20085 | - | 963 | WP_000756328.1 | ParB/RepB/Spo0J family partition protein | - |
| AA102_RS26905 () | 20082..21287 | - | 1206 | WP_000817635.1 | Plasmid partition protein A | VF |
| AA102_RS26915 () | 22045..22296 | + | 252 | WP_001132895.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| AA102_RS26920 () | 22293..22580 | + | 288 | WP_001270422.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AA102_RS29425 () | 22582..22993 | + | 412 | Protein_23 | DDE-type integrase/transposase/recombinase | - |
| AA102_RS26935 () | 23637..24614 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| AA102_RS26940 () | 24857..25597 | - | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| AA102_RS26945 () | 25718..25906 | - | 189 | WP_001332784.1 | hypothetical protein | - |
| AA102_RS26950 () | 26273..27442 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| AA102_RS31020 () | 27668..27843 | - | 176 | Protein_28 | IS3 family transposase | - |
| AA102_RS29435 () | 28289..28561 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| AA102_RS26955 () | 29085..29521 | - | 437 | Protein_30 | IS3 family transposase IS2 | Transposase |
| AA102_RS26960 () | 29611..30090 | - | 480 | Protein_31 | IS3 family transposase IS629 | Transposase |
| AA102_RS26965 () | 30174..31682 | - | 1509 | WP_032145081.1 | group II intron reverse transcriptase/maturase | - |
| AA102_RS31025 () | 32355..33094 | - | 740 | Protein_33 | IS3 family transposase IS629 | Transposase |
| AA102_RS26990 () | 33196..33456 | + | 261 | WP_000371883.1 | hypothetical protein | - |
| AA102_RS26995 () | 33453..33833 | + | 381 | Protein_35 | hypothetical protein | - |
| AA102_RS27000 () | 33897..34601 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AA102_RS27005 () | 34651..35115 | + | 465 | Protein_37 | AAA family ATPase | - |
| AA102_RS27010 () | 35102..35953 | + | 852 | WP_000240536.1 | replication protein | - |
| AA102_RS27015 () | 36260..37075 | + | 816 | WP_001043265.1 | Dihydropteroate synthase | ARG |
| AA102_RS27020 () | 37136..37939 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| AA102_RS27025 () | 37939..38775 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| AA102_RS27030 () | 38836..39540 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| AA102_RS27035 () | 39603..39845 | - | 243 | Protein_43 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP | VF |
| AA102_RS27040 () | 39987..40586 | + | 600 | WP_001177184.1 | cytochrome b/b6 domain-containing protein | - |
| AA102_RS27045 () | 40597..41367 | + | 771 | WP_000712166.1 | molybdopterin-dependent oxidoreductase | - |
| AA102_RS27050 () | 41397..41644 | + | 248 | Protein_46 | hypothetical protein | - |
| AA102_RS31945 () | 41794..41892 | - | 99 | WP_137491101.1 | transposase | - |
| AA102_RS27060 () | 42085..42393 | + | 309 | Protein_48 | IS91 family transposase ISSbo1 | Transposase |
| AA102_RS31655 () | 42508..42720 | - | 213 | WP_001336932.1 | hypothetical protein | - |
| AA102_RS27065 () | 43421..44278 | - | 858 | WP_001537577.1 | incFII family plasmid replication initiator RepA | - |
| AA102_RS29460 () | 44271..44345 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| AA102_RS27075 () | 44579..44836 | - | 258 | WP_000084404.1 | replication regulatory protein RepA | - |
| AA102_RS27300 () | 45121..45270 | - | 150 | WP_001336447.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 45318..45374 | + | 57 | NuclAT_0 | - | Antitoxin Detail |
| - () | 45318..45374 | + | 57 | NuclAT_0 | - | Antitoxin Detail |
| - () | 45318..45374 | + | 57 | NuclAT_0 | - | Antitoxin Detail |
| - () | 45318..45374 | + | 57 | NuclAT_0 | - | Antitoxin Detail |
| AA102_RS27080 () | 45469..45906 | - | 438 | WP_000872609.1 | hypothetical protein | - |
| AA102_RS27085 () | 46080..46442 | - | 363 | WP_046881847.1 | hypothetical protein | - |
| AA102_RS27090 () | 46545..47006 | - | 462 | WP_000760080.1 | thermonuclease family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|