MGE detailed information
MGE type: IScluster/Tn MGE length: 24328 bp
Accession: NZ_CP011417 Location: 28333..52660 Organism: Escherichia coli strain CFSAN029787 Replicon: plasmid pCFSAN029787_01
Accession: NZ_CP011417 Location: 28333..52660 Organism: Escherichia coli strain CFSAN029787 Replicon: plasmid pCFSAN029787_01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AA102_RS25135 () | 24390..27698 | + | 3309 | WP_038341661.1 | outer membrane autotransporter IcsA | - |
| AA102_RS28920 () | 27884..28307 | + | 424 | Protein_31 | fimbria/pilus outer membrane usher protein | - |
| AA102_RS30150 () | 28333..29542 | + | 1210 | Protein_32 | IS3 family transposase | - |
| AA102_RS25155 () | 29883..31535 | + | 1653 | WP_000612524.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| AA102_RS28940 () | 31546..31716 | - | 171 | Protein_34 | transposase | - |
| AA102_RS31880 () | 31849..31968 | - | 120 | Protein_35 | transposase domain-containing protein | - |
| AA102_RS25165 () | 32042..32476 | - | 435 | WP_113774839.1 | reverse transcriptase | - |
| AA102_RS25170 () | 32927..33604 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| AA102_RS25175 () | 33604..33951 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| AA102_RS25180 () | 33971..35542 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| AA102_RS30815 () | 35575..36669 | - | 1095 | WP_162767393.1 | group II intron reverse transcriptase/maturase | - |
| AA102_RS30165 () | 36733..36948 | - | 216 | Protein_41 | IS3 family transposase IS600 | Transposase |
| AA102_RS30825 () | 38516..38785 | - | 270 | Protein_43 | IS3 family transposase ISEc48 | Transposase |
| AA102_RS31560 () | 38900..39538 | - | 639 | WP_000607008.1 | hypothetical protein | VF |
| AA102_RS30180 () | 39697..40167 | - | 471 | Protein_45 | IS1 family transposase IS1N | Transposase |
| AA102_RS25225 () | 40503..40688 | + | 186 | Protein_46 | IS21 family transposase IS100 | Transposase |
| AA102_RS27275 () | 40788..40997 | - | 210 | Protein_47 | peptidoglycan-binding protein | - |
| AA102_RS25235 () | 41047..41226 | - | 180 | Protein_48 | MFS transporter | - |
| AA102_RS25240 () | 41750..42034 | + | 285 | WP_038341659.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| AA102_RS25245 () | 42034..42309 | + | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AA102_RS31885 () | 42441..42578 | - | 138 | WP_000766699.1 | hypothetical protein | - |
| AA102_RS28960 () | 42685..43036 | - | 352 | Protein_52 | plasmid partitioning/stability family protein | - |
| AA102_RS25255 () | 43039..43607 | - | 569 | Protein_53 | plasmid segregation protein ParM | - |
| AA102_RS30185 () | 43615..44706 | + | 1092 | Protein_54 | IS66 family transposase ISEc49 | Transposase |
| AA102_RS28970 () | 44901..46109 | - | 1209 | WP_000198523.1 | IS91 family transposase ISSbo1 | Transposase |
| AA102_RS25280 () | 46090..46362 | - | 273 | WP_000019158.1 | hypothetical protein | - |
| AA102_RS25285 () | 46522..46740 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AA102_RS25290 () | 46742..47047 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AA102_RS30840 () | 47083..47178 | + | 96 | Protein_59 | transposase domain-containing protein | - |
| AA102_RS25295 () | 47440..49077 | + | 1638 | WP_046881589.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| AA102_RS25300 () | 49285..49554 | + | 270 | WP_000079956.1 | hypothetical protein | - |
| AA102_RS31890 () | 49551..49777 | + | 227 | Protein_62 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| AA102_RS25305 () | 49806..50291 | + | 486 | WP_038339729.1 | Protein kinase OspG | VF |
| AA102_RS25310 () | 50306..51003 | - | 698 | Protein_64 | IS1 family transposase IS1X2 | Transposase |
| AA102_RS28985 () | 51053..51172 | + | 120 | WP_071845702.1 | type III effector | - |
| AA102_RS31895 () | 52777..52968 | - | 192 | Protein_67 | IS66 family insertion sequence element accessory protein TnpB | - |
| AA102_RS25345 () | 52966..53290 | + | 325 | Protein_68 | IS3 family transposase | - |
| AA102_RS25350 () | 53320..56232 | - | 2913 | WP_162487924.1 | hypothetical protein | - |
| AA102_RS28990 () | 56235..56351 | + | 117 | WP_004996477.1 | hypothetical protein | - |
| AA102_RS25360 () | 56715..57557 | + | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|