MGE detailed information
MGE type: Mobilizable plasmid MGE length: 75079 bp
Accession: NZ_CP011332 Location: 1..75079 Organism: Escherichia coli O104:H4 str. C227-11 isolate 368 shch Replicon: plasmid unnamed
Accession: NZ_CP011332 Location: 1..75079 Organism: Escherichia coli O104:H4 str. C227-11 isolate 368 shch Replicon: plasmid unnamed
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AAF13_RS26725 () | 99..430 | - | 332 | Protein_0 | type II toxin-antitoxin system ParD family antitoxin | - |
| AAF13_RS26730 () | 436..711 | - | 276 | WP_000421273.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| AAF13_RS26735 () | 711..995 | - | 285 | WP_001387467.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| AAF13_RS26740 () | 1903..2731 | - | 829 | Protein_3 | incFII family plasmid replication initiator RepA | - |
| AAF13_RS26750 () | 2724..2798 | - | 75 | WP_014966221.1 | RepA leader peptide Tap | - |
| AAF13_RS32405 () | 2795..2929 | - | 135 | Protein_5 | protein CopA/IncA | - |
| AAF13_RS26755 () | 3036..3290 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| AAF13_RS26760 () | 3572..4553 | + | 982 | Protein_7 | IS5 family transposase ISKpn26 | Transposase |
| AAF13_RS26765 () | 5004..5216 | - | 213 | Protein_8 | ANR family transcriptional regulator | - |
| AAF13_RS26770 () | 5281..5958 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| AAF13_RS26775 () | 5958..6305 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| AAF13_RS26780 () | 6325..7896 | + | 1572 | WP_000381397.1 | IS66 family transposase ISCro1 | Transposase |
| AAF13_RS26785 () | 7950..8228 | - | 279 | Protein_12 | transposase domain-containing protein | - |
| AAF13_RS26790 () | 8209..8505 | - | 297 | WP_000624689.1 | IS66 family transposase ISEc47 | Transposase |
| AAF13_RS26795 () | 8502..8936 | - | 435 | WP_001387845.1 | IS66 family transposase ISEc43 | Transposase |
| AAF13_RS26800 () | 9165..9726 | - | 562 | Protein_15 | fertility inhibition protein FinO | - |
| AAF13_RS26805 () | 9781..10527 | - | 747 | WP_000205736.1 | conjugal transfer pilus acetylase TraX | - |
| AAF13_RS29885 () | 10547..15212 | - | 4666 | Protein_17 | Multifunctional conjugation protein TraI | Relaxase |
| AAF13_RS29890 () | 15274..15960 | + | 687 | Protein_18 | IS1 family transposase | - |
| AAF13_RS29895 () | 15966..16424 | - | 459 | Protein_19 | PAS domain-containing protein | - |
| AAF13_RS26835 () | 16618..17001 | - | 384 | WP_001151564.1 | relaxosome protein TraM | - |
| AAF13_RS26840 () | 17287..17934 | + | 648 | WP_000614287.1 | hypothetical protein | VF |
| AAF13_RS26845 () | 18252..19052 | - | 801 | WP_001234427.1 | DUF945 domain-containing protein | - |
| AAF13_RS29900 () | 19261..19549 | - | 289 | Protein_23 | DUF4158 domain-containing protein | - |
| AAF13_RS29905 () | 19679..20317 | + | 639 | Protein_24 | recombinase family protein | - |
| AAF13_RS26855 () | 20626..24720 | + | 4095 | WP_001034126.1 | Serine protease SepA autotransporter | VF |
| AAF13_RS26860 () | 25015..25203 | - | 189 | Protein_26 | IS66 family transposase IS682 | Transposase |
| AAF13_RS26865 () | 25314..25748 | + | 435 | WP_001387845.1 | IS66 family transposase ISEc43 | Transposase |
| AAF13_RS26870 () | 25745..26095 | + | 351 | WP_000624736.1 | IS66 family transposase ISEc47 | Transposase |
| AAF13_RS26875 () | 26126..27550 | + | 1425 | Protein_29 | IS66 family transposase ISEc43 | Transposase |
| AAF13_RS26880 () | 27804..28937 | - | 1134 | WP_000555401.1 | IS110 family transposase ISEc45 | Transposase |
| AAF13_RS26885 () | 29912..31123 | - | 1212 | WP_000673201.1 | dispersin export-associated protein AatD | - |
| AAF13_RS26890 () | 31140..31769 | - | 630 | WP_000621743.1 | dispersin export ABC transporter ATP-binding protein AatC | - |
| AAF13_RS26895 () | 31762..32583 | - | 822 | WP_000810824.1 | dispersin export-associated protein AatB | - |
| AAF13_RS26900 () | 32480..33718 | - | 1239 | WP_001216021.1 | dispersin export ABC transporter outer membrane protein AatA | - |
| AAF13_RS26905 () | 33715..34845 | - | 1131 | WP_000209219.1 | dispersin export ABC transporter permease subunit AatP | - |
| AAF13_RS29915 () | 35225..35395 | + | 171 | Protein_36 | IS3 family transposase | - |
| AAF13_RS26915 () | 35616..35852 | + | 237 | WP_000239755.1 | IS66 family transposase IS682 | Transposase |
| AAF13_RS32410 () | 35887..37618 | - | 1732 | Protein_38 | Serine protease SepA autotransporter | VF |
| AAF13_RS27645 () | 37929..38922 | - | 994 | Protein_39 | IS630 family transposase | - |
| AAF13_RS26935 () | 39140..39340 | - | 201 | WP_000643555.1 | AggR-activated transcriptional regulator Aar | - |
| AAF13_RS30965 () | 39446..39761 | - | 316 | Protein_41 | hypothetical protein | - |
| AAF13_RS26940 () | 39933..40913 | - | 981 | WP_000019440.1 | IS5 family transposase ISKpn26 | Transposase |
| AAF13_RS32010 () | 41270..41620 | + | 351 | WP_000721276.1 | hypothetical protein | VF |
| AAF13_RS26955 () | 41824..42303 | - | 480 | Protein_44 | IS3 family transposase IS629 | Transposase |
| AAF13_RS26960 () | 42387..43769 | - | 1383 | Protein_45 | group II intron reverse transcriptase/maturase | - |
| AAF13_RS26965 () | 43826..44938 | + | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| AAF13_RS30970 () | 45105..45260 | - | 156 | WP_000587091.1 | hypothetical protein | - |
| AAF13_RS31575 () | 45918..46657 | - | 740 | Protein_48 | IS3 family transposase IS1203 | Transposase |
| AAF13_RS29950 () | 46663..46863 | - | 201 | Protein_49 | IS3 family transposase | - |
| AAF13_RS29955 () | 46853..47175 | + | 323 | Protein_50 | IS3 family transposase | - |
| AAF13_RS26985 () | 47391..48188 | + | 798 | WP_000769457.1 | CFA/I fimbrial subunit D | VF |
| AAF13_RS31580 () | 48289..48471 | + | 183 | Protein_52 | IS1 family transposase ISEc30 | Transposase |
| AAF13_RS31585 () | 48472..48660 | + | 189 | Protein_53 | IS1 family transposase ISEc30 | Transposase |
| AAF13_RS27000 () | 48936..49939 | - | 1004 | Protein_54 | IS110 family transposase ISPlu13 | Transposase |
| AAF13_RS27005 () | 50122..51102 | - | 981 | WP_000019427.1 | IS5 family transposase ISKpn26 | Transposase |
| AAF13_RS32415 () | 51262..51414 | + | 153 | WP_000565591.1 | hypothetical protein | - |
| AAF13_RS27785 () | 51917..52456 | - | 540 | WP_001387337.1 | isopentenyl-diphosphate Delta-isomerase | - |
| AAF13_RS27025 () | 52460..53488 | - | 1029 | WP_000869859.1 | class 1 isoprenoid biosynthesis enzyme | - |
| AAF13_RS27030 () | 53630..53803 | - | 174 | Protein_59 | integrase core domain-containing protein | - |
| AAF13_RS27035 () | 53924..54424 | + | 501 | WP_000033204.1 | IS3 family transposase ISEcB1 | Transposase |
| AAF13_RS27790 () | 54880..55173 | - | 294 | Protein_61 | integrase core domain-containing protein | - |
| AAF13_RS32420 () | 55173..55304 | + | 132 | Protein_62 | IS3 family transposase | - |
| AAF13_RS27055 () | 55440..56978 | - | 1539 | WP_000997981.1 | IS66 family transposase ISEc8 | Transposase |
| AAF13_RS27060 () | 57028..57375 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| AAF13_RS32095 () | 57372..57752 | - | 381 | WP_001401984.1 | IS66 family transposase ISEc8 | Transposase |
| AAF13_RS29975 () | 57851..58120 | + | 270 | Protein_66 | ISL3 family transposase | - |
| AAF13_RS27070 () | 58170..58409 | - | 240 | Protein_67 | IS21 family transposase ISSso4 | Transposase |
| AAF13_RS27075 () | 58546..59049 | - | 504 | WP_001390509.1 | hypothetical protein | VF |
| AAF13_RS27080 () | 59151..59589 | - | 439 | Protein_69 | Protein AggB | VF |
| AAF13_RS27085 () | 59603..62131 | - | 2529 | WP_000858405.1 | F1 capsule-anchoring protein | VF |
| AAF13_RS27090 () | 62145..62903 | - | 759 | WP_000702455.1 | Chaperone protein caf1M | VF |
| AAF13_RS32170 () | 63357..63591 | + | 235 | Protein_72 | hypothetical protein | - |
| AAF13_RS29985 () | 63572..63751 | + | 180 | WP_001390505.1 | IS91 family transposase ISSbo1 | Transposase |
| AAF13_RS27105 () | 63758..64324 | - | 567 | WP_032159540.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| AAF13_RS32425 () | 64329..64454 | - | 126 | Protein_75 | 3'-5' exonuclease | - |
| AAF13_RS27110 () | 64456..64833 | + | 378 | WP_000457137.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| AAF13_RS27115 () | 64833..66106 | + | 1274 | Protein_77 | translesion error-prone DNA polymerase V subunit UmuC | - |
| AAF13_RS27125 () | 66108..66524 | - | 417 | WP_001278815.1 | plasmid partitioning/stability family protein | - |
| AAF13_RS27130 () | 66517..67497 | - | 981 | WP_000688504.1 | plasmid segregation protein ParM | - |
| AAF13_RS27135 () | 67911..68219 | - | 309 | WP_000030204.1 | molecular chaperone GroEL | - |
| AAF13_RS27140 () | 68306..68950 | - | 645 | WP_001144032.1 | ParA family protein | - |
| AAF13_RS27145 () | 69129..69935 | - | 807 | WP_000016961.1 | site-specific integrase | - |
| AAF13_RS27150 () | 69936..70241 | - | 306 | WP_001159872.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| AAF13_RS27155 () | 70243..70461 | - | 219 | WP_000813638.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| AAF13_RS27160 () | 71056..71286 | + | 231 | WP_001261288.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| AAF13_RS27165 () | 71310..71711 | + | 402 | WP_001392130.1 | type II toxin-antitoxin system VapC family toxin | - |
| AAF13_RS27170 () | 71794..71943 | - | 150 | Protein_87 | transposase domain-containing protein | - |
| AAF13_RS27185 () | 73035..74012 | + | 978 | WP_001387465.1 | RepB family plasmid replication initiator protein | - |
| AAF13_RS27190 () | 74291..75030 | - | 740 | Protein_89 | IS91 family transposase ISMno23 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|