MGE detailed information
MGE type: Prophage MGE length: 19087 bp
Accession: NZ_CP011324 Location: 1626109..1645195 Organism: Escherichia coli strain SQ2203 Replicon: chromosome
Accession: NZ_CP011324 Location: 1626109..1645195 Organism: Escherichia coli strain SQ2203 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CS35_RS08035 () | 1621702..1621905 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| CS35_RS08040 () | 1621940..1623400 | - | 1461 | WP_000527743.1 | mannitol dehydrogenase family protein | - |
| CS35_RS08045 () | 1623489..1624856 | - | 1368 | Protein_1541 | MHS family MFS transporter | - |
| CS35_RS25435 () | 1625377..1625490 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| CS35_RS08050 () | 1625559..1625792 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| CS35_RS08055 () | 1626109..1626699 | + | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| CS35_RS08060 () | 1626797..1627372 | - | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| CS35_RS08065 () | 1627372..1628334 | - | 963 | WP_001027733.1 | phage tail protein | - |
| CS35_RS08070 () | 1628285..1628854 | - | 570 | WP_000453612.1 | DNA-packaging protein | - |
| CS35_RS08075 () | 1629243..1629476 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| CS35_RS08080 () | 1629534..1629944 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| CS35_RS08085 () | 1630096..1630269 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| CS35_RS08090 () | 1630441..1630596 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| CS35_RS25440 () | 1630675..1630740 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| CS35_RS23645 () | 1630743..1630931 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| CS35_RS08095 () | 1630942..1631154 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| CS35_RS08100 () | 1631517..1632014 | - | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| CS35_RS08105 () | 1632011..1632544 | - | 534 | WP_001092971.1 | lysozyme | - |
| CS35_RS08110 () | 1632541..1632852 | - | 312 | WP_000189916.1 | YdfR family protein | - |
| CS35_RS08115 () | 1632857..1633072 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| CS35_RS08120 () | 1633826..1634041 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| CS35_RS08125 () | 1634342..1634554 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| CS35_RS25445 () | 1634609..1634698 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| CS35_RS08130 () | 1634976..1635728 | - | 753 | WP_001047135.1 | antitermination protein | - |
| CS35_RS08135 () | 1635742..1636791 | - | 1050 | WP_001393597.1 | DUF968 domain-containing protein | - |
| CS35_RS08140 () | 1636793..1637071 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| CS35_RS08145 () | 1637138..1637389 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| CS35_RS08150 () | 1637606..1637761 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| CS35_RS08155 () | 1637833..1638120 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| CS35_RS08160 () | 1638120..1638359 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| CS35_RS23650 () | 1638384..1638689 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| CS35_RS08165 () | 1638892..1639224 | + | 333 | WP_001301033.1 | protein FlxA | - |
| CS35_RS22915 () | 1639661..1639810 | - | 150 | WP_011443592.1 | hypothetical protein | - |
| CS35_RS08170 () | 1639845..1640123 | - | 279 | Protein_1572 | hypothetical protein | - |
| CS35_RS08175 () | 1640107..1640337 | - | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| CS35_RS08180 () | 1640421..1640828 | + | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| CS35_RS08185 () | 1640995..1641150 | + | 156 | WP_000379575.1 | DUF1391 family protein | - |
| CS35_RS08190 () | 1641310..1641528 | + | 219 | WP_001171942.1 | hypothetical protein | - |
| CS35_RS08200 () | 1642096..1642284 | + | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| CS35_RS08205 () | 1642281..1642472 | + | 192 | WP_001083297.1 | lysis protein YdfD | - |
| CS35_RS23665 () | 1642565..1643332 | + | 768 | Protein_1579 | exonuclease | - |
| CS35_RS08215 () | 1643329..1644024 | + | 696 | Protein_1580 | IS3 family transposase IS2 | Transposase |
| CS35_RS25455 () | 1644038..1645195 | + | 1158 | Protein_1581 | Putative defective protein IntQ ; Integrase | Integrase |
| CS35_RS24940 () | 1645215..1645325 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| CS35_RS08225 () | 1645383..1646402 | - | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| CS35_RS08230 () | 1646414..1647628 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| CS35_RS08235 () | 1647834..1648160 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| CS35_RS08240 () | 1648295..1648636 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| CS35_RS08245 () | 1648671..1649231 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| CS35_RS08250 () | 1649234..1649944 | - | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Prophage | TA20026 | CP009789 | 1611431..1634475 | 0.004 | |
| Escherichia coli str. K-12 substr. W3110 | Prophage | TA21438 | NC_007779 | 1632716..1654422 | 0.003 | |
| Escherichia coli DH1 | Prophage | TA27404 | NC_017638 | 1615804..1634890 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Prophage | TA68425 | NZ_CP017979 | 1534772..1559021 | 0.005 | |
| Escherichia coli strain DH5alpha | Prophage | TA90479 | NZ_CP025520 | 488442..510148 | 0.003 |