MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 37089 bp
Accession: NZ_CP011164 Location: 1..37089 Organism: Xanthomonas citri pv. aurantifolii strain FDC 1609 Replicon: plasmid pXfc37
Accession: NZ_CP011164 Location: 1..37089 Organism: Xanthomonas citri pv. aurantifolii strain FDC 1609 Replicon: plasmid pXfc37
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TP50_RS23480 () | 634..1656 | - | 1023 | WP_007968768.1 | Type IV secretion system protein VirB11 | VF |
| TP50_RS23485 () | 1667..2887 | - | 1221 | WP_007968765.1 | Type IV secretion system protein virB10 | VF |
| TP50_RS23490 () | 2889..3542 | - | 654 | Protein_3 | Type IV secretion system protein virB9 | VF |
| TP50_RS23495 () | 3610..4028 | + | 419 | Protein_4 | IS3 family transposase ISXac2 | Transposase |
| TP50_RS23505 () | 5221..7122 | - | 1902 | Protein_6 | Type IV secretion system protein virB4 | VF |
| TP50_RS23510 () | 7145..7444 | - | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| TP50_RS23515 () | 7441..7818 | - | 378 | WP_007967031.1 | TrbC/VirB2 family protein | - |
| TP50_RS23520 () | 7847..8128 | - | 282 | WP_017158359.1 | hypothetical protein | - |
| TP50_RS23530 () | 8631..8960 | + | 330 | WP_007967027.1 | hypothetical protein | - |
| TP50_RS23540 () | 9452..10273 | + | 822 | WP_007967026.1 | hypothetical protein | - |
| TP50_RS24555 () | 11471..11608 | + | 138 | Protein_12 | hypothetical protein | - |
| TP50_RS23550 () | 11637..12266 | + | 630 | WP_011153925.1 | AAA family ATPase | - |
| TP50_RS23555 () | 12263..12517 | + | 255 | WP_017154799.1 | hypothetical protein | - |
| TP50_RS23560 () | 12855..15510 | - | 2656 | Protein_15 | avirulence protein | - |
| TP50_RS23570 () | 16183..16791 | + | 609 | WP_017154888.1 | hypothetical protein | - |
| TP50_RS23575 () | 16904..17536 | + | 633 | WP_007966093.1 | ParA family protein | - |
| TP50_RS23580 () | 17529..17858 | + | 330 | WP_088370898.1 | hypothetical protein | - |
| TP50_RS23585 () | 17925..18209 | + | 285 | WP_017154887.1 | hypothetical protein | - |
| TP50_RS23590 () | 18216..19397 | + | 1182 | WP_088409644.1 | zeta toxin family protein | - |
| TP50_RS23595 () | 19835..20537 | - | 703 | Protein_21 | UPF0149 family protein | - |
| TP50_RS23600 () | 20755..20934 | - | 180 | WP_080582270.1 | hypothetical protein | - |
| TP50_RS23605 () | 21333..22019 | + | 687 | WP_007968793.1 | DNA-binding protein | - |
| TP50_RS23610 () | 22178..23140 | + | 963 | WP_088409645.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| TP50_RS23615 () | 23249..23518 | + | 270 | WP_017158384.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| TP50_RS23620 () | 23505..23786 | + | 282 | WP_017158383.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| TP50_RS23625 () | 24002..24892 | + | 891 | WP_108702711.1 | restriction endonuclease | - |
| TP50_RS23630 () | 24901..25569 | - | 669 | WP_007968835.1 | S-adenosylmethionine-binding protein | - |
| TP50_RS24560 () | 25583..25807 | - | 225 | WP_131458977.1 | hypothetical protein | - |
| TP50_RS23635 () | 26006..26359 | - | 354 | WP_033481414.1 | hypothetical protein | - |
| TP50_RS23640 () | 26405..27112 | - | 708 | WP_088409646.1 | plasmid stabilization protein | - |
| TP50_RS23645 () | 27109..27555 | - | 447 | WP_033481413.1 | hypothetical protein | - |
| TP50_RS23650 () | 27903..28298 | + | 396 | WP_007966864.1 | hypothetical protein | - |
| TP50_RS23655 () | 28298..28486 | + | 189 | WP_017162389.1 | hypothetical protein | - |
| TP50_RS23660 () | 28490..30064 | + | 1575 | WP_011345596.1 | type IV secretion system DNA-binding domain-containing protein | - |
| TP50_RS23665 () | 30078..33053 | + | 2976 | WP_088409647.1 | Multifunctional conjugation protein TraI | Relaxase |
| TP50_RS23670 () | 33123..33449 | - | 327 | WP_173668640.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| TP50_RS23675 () | 33446..33664 | - | 219 | WP_003491150.1 | antitoxin MazE family protein | Antitoxin Detail |
| TP50_RS23680 () | 33861..34142 | + | 282 | WP_017157756.1 | DUF1778 domain-containing protein | - |
| TP50_RS23685 () | 34139..34636 | + | 498 | WP_088409648.1 | GNAT family N-acetyltransferase | - |
| TP50_RS23690 () | 34803..35066 | - | 264 | WP_088409649.1 | hypothetical protein | - |
| TP50_RS23695 () | 35159..35572 | - | 414 | WP_088409650.1 | hypothetical protein | - |
| TP50_RS23700 () | 35583..36158 | - | 576 | WP_088409651.1 | Phospholipase D | VF |
| TP50_RS23705 () | 36201..36788 | - | 588 | WP_007966857.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|