MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 37980 bp
Accession: NZ_CP011162 Location: 1..37980 Organism: Xanthomonas citri pv. aurantifolii strain FDC 1559 Replicon: plasmid pXfc38
Accession: NZ_CP011162 Location: 1..37980 Organism: Xanthomonas citri pv. aurantifolii strain FDC 1559 Replicon: plasmid pXfc38
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| TP37_RS23945 () | 209..580 | - | 372 | WP_007974938.1 | TrbC/VirB2 family protein | - |
| TP37_RS23950 () | 608..898 | - | 291 | WP_017158353.1 | hypothetical protein | - |
| TP37_RS23955 () | 1210..1602 | + | 393 | WP_007974941.1 | hypothetical protein | - |
| TP37_RS23960 () | 2118..2936 | + | 819 | WP_007974943.1 | hypothetical protein | - |
| TP37_RS23965 () | 3910..4518 | + | 609 | WP_017154888.1 | hypothetical protein | - |
| TP37_RS23970 () | 4631..5263 | + | 633 | WP_007966093.1 | ParA family protein | - |
| TP37_RS23975 () | 5256..5588 | + | 333 | WP_007966095.1 | hypothetical protein | - |
| TP37_RS23980 () | 5714..6694 | - | 981 | WP_007962146.1 | IS5 family transposase IS1646 | Transposase |
| TP37_RS23985 () | 6816..7100 | + | 285 | WP_017154887.1 | hypothetical protein | - |
| TP37_RS23990 () | 7107..8294 | + | 1188 | WP_088370902.1 | zeta toxin family protein | - |
| TP37_RS23995 () | 8334..8900 | - | 567 | WP_007966097.1 | Tn3 family transposase ISPsy42 | Transposase |
| TP37_RS24610 () | 9151..9594 | - | 444 | WP_123768332.1 | hypothetical protein | - |
| TP37_RS24005 () | 9646..10047 | + | 402 | Protein_13 | hypothetical protein | - |
| TP37_RS24895 () | 10314..10693 | - | 380 | Protein_14 | hypothetical protein | - |
| TP37_RS24015 () | 11007..11315 | - | 309 | WP_157883188.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| TP37_RS24020 () | 11332..11547 | - | 216 | WP_011345582.1 | antitoxin MazE family protein | Antitoxin Detail |
| TP37_RS24025 () | 11795..12127 | - | 333 | Protein_17 | hypothetical protein | - |
| TP37_RS24030 () | 12124..12755 | - | 632 | Protein_18 | Chromosome-partitioning ATPase Soj | VF |
| TP37_RS24040 () | 13231..13917 | + | 687 | WP_007974125.1 | DNA-binding protein | - |
| TP37_RS24045 () | 14077..15051 | + | 975 | WP_007974204.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| TP37_RS24050 () | 15160..15429 | + | 270 | WP_017158384.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| TP37_RS24055 () | 15416..15697 | + | 282 | WP_042806120.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| TP37_RS24900 () | 17051..17179 | - | 129 | Protein_24 | plasmid stabilization protein | - |
| TP37_RS24070 () | 17176..17631 | - | 456 | WP_088370905.1 | conjugal transfer protein TraD | - |
| TP37_RS24075 () | 18020..18415 | + | 396 | WP_088370906.1 | conjugal transfer protein TraA | - |
| TP37_RS24080 () | 18513..18782 | + | 270 | WP_017158796.1 | hypothetical protein | - |
| TP37_RS24085 () | 18779..19072 | + | 294 | WP_017158795.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| TP37_RS24090 () | 19185..19805 | + | 621 | WP_007974812.1 | hypothetical protein | - |
| TP37_RS24095 () | 20005..20347 | + | 343 | Protein_30 | hypothetical protein | - |
| TP37_RS24100 () | 20419..20616 | + | 198 | WP_017158766.1 | hypothetical protein | - |
| TP37_RS24105 () | 20620..22224 | + | 1605 | Protein_32 | type IV secretion system DNA-binding domain-containing protein | - |
| TP37_RS24750 () | 22212..22550 | + | 339 | WP_088370907.1 | Multifunctional conjugation protein TraI | Relaxase |
| TP37_RS24755 () | 22493..23263 | + | 771 | WP_088370908.1 | relaxase domain-containing protein | - |
| TP37_RS24760 () | 23229..24227 | + | 999 | WP_162269080.1 | AAA family ATPase | - |
| TP37_RS24765 () | 24232..24873 | + | 642 | WP_162269081.1 | hypothetical protein | - |
| TP37_RS24770 () | 24870..25281 | + | 412 | Protein_37 | hypothetical protein | - |
| TP37_RS24125 () | 25651..26588 | + | 938 | Protein_38 | ParA family protein | - |
| TP37_RS24130 () | 26768..27128 | - | 361 | Protein_39 | hypothetical protein | - |
| TP37_RS24135 () | 27184..27759 | - | 576 | WP_042806236.1 | Phospholipase D | VF |
| TP37_RS24140 () | 27802..28389 | - | 588 | WP_007966857.1 | hypothetical protein | - |
| TP37_RS24145 () | 28435..29322 | - | 888 | WP_042806238.1 | Type IV secretion system protein virB1 | VF |
| TP37_RS24150 () | 29333..30355 | - | 1023 | WP_007968768.1 | Type IV secretion system protein VirB11 | VF |
| TP37_RS24155 () | 30366..31586 | - | 1221 | WP_007974926.1 | Type IV secretion system protein virB10 | VF |
| TP37_RS24160 () | 31588..32370 | - | 783 | WP_007974928.1 | Type IV secretion system protein virB9 | VF |
| TP37_RS24165 () | 32395..33069 | - | 675 | WP_007968762.1 | type IV secretion system protein | - |
| TP37_RS24170 () | 33066..33932 | - | 867 | WP_007974930.1 | type IV secretion system protein | - |
| TP37_RS24175 () | 33934..34314 | - | 381 | WP_007974932.1 | hypothetical protein | - |
| TP37_RS24180 () | 34307..34525 | - | 219 | WP_017160238.1 | hypothetical protein | - |
| TP37_RS24185 () | 34572..35240 | - | 669 | WP_042806239.1 | hypothetical protein | - |
| TP37_RS24190 () | 35237..37870 | - | 2634 | WP_007974937.1 | Type IV secretion system protein virB4 | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|