MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 202401 bp
Accession: NZ_CP011134        Location: 3297487..3499887         Organism: Escherichia coli VR50       Replicon: chromosome


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
ECVR50_RS16435 () 3294291..3294998 + 708 WP_000234490.1 DUF554 domain-containing protein -
ECVR50_RS16445 () 3295356..3296534 + 1179 WP_001522333.1 tyrosine-type recombinase/integrase -
ECVR50_RS16455 () 3296959..3297711 + 753 Protein_3119 tetratricopeptide repeat protein -
ECVR50_RS27485 () 3297748..3300432 - 2685 WP_187415415.1 IS21 family transposase ISSso4 Transposase
ECVR50_RS16480 () 3300613..3301644 - 1032 WP_113328817.1 IS4 family transposase ISLpn6 Transposase
ECVR50_RS16485 () 3302907..3303389 - 483 WP_046072888.1 hypothetical protein VF
ECVR50_RS16490 () 3303591..3303764 - 174 WP_000527471.1 hypothetical protein VF
ECVR50_RS16495 () 3304143..3304586 - 444 WP_001522328.1 hypothetical protein VF
ECVR50_RS16500 () 3304602..3307184 - 2583 WP_001522324.1 hypothetical protein VF
ECVR50_RS16505 () 3307224..3308021 - 798 WP_001522323.1 hypothetical protein VF
ECVR50_RS16510 () 3308324..3308629 - 306 WP_001522322.1 hypothetical protein VF
ECVR50_RS16515 () 3309431..3309688 + 258 WP_001522321.1 Dr hemagglutinin AFA-III operon transcriptional regulator AfaF -
ECVR50_RS16525 () 3310127..3310369 - 243 WP_001522318.1 hypothetical protein -
ECVR50_RS16535 () 3310443..3311656 + 1214 WP_193376830.1 IS3 family transposase IS629 Transposase
ECVR50_RS16540 () 3312097..3312486 - 390 WP_001522311.1 hypothetical protein -
ECVR50_RS16545 () 3313673..3314167 + 495 WP_001522307.1 Transcriptional regulator SlyA VF
ECVR50_RS16550 () 3314436..3318041 - 3606 WP_001522306.1 hypothetical protein -
ECVR50_RS16555 () 3318249..3318875 - 627 WP_001522305.1 hypothetical protein -
ECVR50_RS27500 () 3319019..3319174 - 156 Protein_3135 Rpn family recombination-promoting nuclease/putative transposase -
ECVR50_RS30130 () 3319279..3319602 - 324 WP_157919120.1 hypothetical protein -
ECVR50_RS16565 () 3319738..3320214 + 477 WP_001522303.1 ProQ/FinO family protein -
ECVR50_RS16570 () 3320216..3320749 - 534 WP_001522302.1 hypothetical protein -
ECVR50_RS16575 () 3321027..3321260 - 234 WP_001522301.1 AlpA family transcriptional regulator -
ECVR50_RS16585 () 3321692..3322102 - 411 WP_001522299.1 hypothetical protein -
ECVR50_RS16590 () 3322099..3322482 - 384 WP_016234003.1 hypothetical protein -
ECVR50_RS16595 () 3322650..3323219 - 570 WP_046072890.1 inovirus Gp2 family protein -
ECVR50_RS16600 () 3323415..3323609 + 195 WP_000236756.1 hypothetical protein -
ECVR50_RS30135 () 3323736..3323985 - 250 Protein_3144 hypothetical protein -
ECVR50_RS29420 () 3324955..3325161 + 207 WP_001095913.1 AlpA family transcriptional regulator -
ECVR50_RS16620 () 3325249..3325857 + 609 WP_077634145.1 hypothetical protein -
ECVR50_RS16640 () 3326727..3327940 + 1214 WP_139371347.1 IS3 family transposase IS629 Transposase
ECVR50_RS16645 () 3329157..3330311 + 1155 WP_001522292.1 hypothetical protein -
ECVR50_RS16650 () 3330395..3331267 + 873 WP_046072891.1 GTPase family protein -
ECVR50_RS16655 () 3331599..3334721 + 3123 WP_046072892.1 autotransporter adhesin Ag43 -
ECVR50_RS16660 () 3335038..3335856 + 819 WP_001522287.1 DUF945 domain-containing protein -
ECVR50_RS30350 () 3335856..3336032 + 177 WP_001522285.1 hypothetical protein -
ECVR50_RS16665 () 3336127..3336600 + 474 WP_001522284.1 antirestriction protein -
ECVR50_RS16670 () 3336615..3337091 + 477 WP_001186724.1 RadC family protein -
ECVR50_RS16675 () 3337272..3338771 + 1500 WP_001522281.1 IS21 family transposase ISEc10 Transposase
ECVR50_RS16680 () 3338768..3339523 + 756 WP_001522280.1 IS21 family transposase ISEc10 Transposase
ECVR50_RS16685 () 3339575..3339796 + 222 WP_023909484.1 DUF987 domain-containing protein -
ECVR50_RS16690 () 3339876..3340250 + 375 WP_001522275.1 type IV toxin-antitoxin system toxin CbtA Antitoxin Detail
ECVR50_RS16695 () 3340297..3340671 + 375 WP_023909482.1 TA system toxin CbtA family protein Toxin Detail
ECVR50_RS16700 () 3340668..3341159 + 492 WP_001522269.1 hypothetical protein -
ECVR50_RS16705 () 3341171..3341368 + 198 WP_001522268.1 DUF957 domain-containing protein -
ECVR50_RS16710 () 3341453..3342319 + 867 WP_001522267.1 DUF4942 domain-containing protein -
ECVR50_RS16715 () 3342391..3342654 + 264 WP_001143297.1 type II toxin-antitoxin system ParD family antitoxin -
ECVR50_RS16720 () 3342651..3342977 + 327 WP_001522265.1 type II toxin-antitoxin system RelE/ParE family toxin -
ECVR50_RS16725 () 3343441..3344706 + 1266 WP_001218878.1 hypothetical protein ; Integrase Integrase
ECVR50_RS16730 () 3344962..3346005 + 1044 WP_000147018.1 hypothetical protein -
ECVR50_RS28945 () 3346494..3347099 + 606 Protein_3167 IS1 family transposase -
ECVR50_RS16745 () 3347566..3348117 - 552 WP_001447126.1 Transcriptional regulator SlyA VF
ECVR50_RS29435 () 3348284..3349449 - 1166 Protein_3169 IS3 family transposase -
ECVR50_RS27565 () 3349588..3349806 - 219 Protein_3170 adhesin -
ECVR50_RS28955 () 3349824..3350429 - 606 Protein_3171 IS1 family transposase -
ECVR50_RS16770 () 3350574..3351140 - 567 WP_000597754.1 hypothetical protein VF
ECVR50_RS16775 () 3351348..3351661 - 314 Protein_3173 adhesin biosynthesis transcription regulatory family protein -
ECVR50_RS16785 () 3352066..3352299 + 234 WP_000006214.1 hypothetical protein VF
ECVR50_RS16790 () 3352863..3354076 - 1214 Protein_3175 IS3 family transposase IS629 Transposase
ECVR50_RS29445 () 3354167..3354280 - 114 WP_001513409.1 lysis system i-spanin subunit Rz -
ECVR50_RS16810 () 3354816..3355565 - 750 Protein_3177 ISL3 family transposase ISKox3 Transposase
ECVR50_RS16815 () 3356114..3356374 + 261 WP_001110186.1 DUF1471 domain-containing protein -
ECVR50_RS16820 () 3356416..3356976 + 561 WP_000109148.1 TetR/AcrR family transcriptional regulator -
ECVR50_RS16825 () 3357016..3357444 + 429 WP_001296373.1 DUF417 family protein -
ECVR50_RS27590 () 3357587..3357800 - 214 Protein_3181 helicase -
ECVR50_RS16835 () 3358153..3359381 + 1229 WP_105955809.1 IS3 family transposase IS2 Transposase
ECVR50_RS16845 () 3359881..3361971 + 2091 WP_001223354.1 bifunctional siderophore receptor/adhesin Iha -
ECVR50_RS28965 () 3362189..3362348 - 160 Protein_3184 transposase domain-containing protein -
ECVR50_RS16855 () 3362833..3363075 + 243 WP_001363144.1 hypothetical protein -
ECVR50_RS16860 () 3363163..3363354 + 192 WP_000751583.1 hypothetical protein -
ECVR50_RS16865 () 3363366..3363734 + 369 WP_001405924.1 hypothetical protein -
ECVR50_RS16870 () 3363738..3363953 + 216 WP_000266541.1 hypothetical protein -
ECVR50_RS27610 () 3364531..3365362 - 832 Protein_3189 IS110 family transposase -
ECVR50_RS27615 () 3365420..3365605 + 186 Protein_3190 transposase domain-containing protein -
ECVR50_RS16885 () 3366030..3366222 - 193 Protein_3191 peptide ABC transporter substrate-binding protein -
ECVR50_RS16890 () 3366559..3367356 + 798 Protein_3192 L-lactate permease -
ECVR50_RS16895 () 3367390..3368922 - 1533 Protein_3193 IS3 family transposase ISKpn38 Transposase
ECVR50_RS16905 () 3369338..3369712 - 375 Protein_3194 hypothetical protein -
ECVR50_RS16915 () 3369767..3370980 + 1214 WP_139371347.1 IS3 family transposase IS629 Transposase
ECVR50_RS16925 () 3371278..3375165 - 3888 WP_001034084.1 hypothetical protein VF
ECVR50_RS30355 () 3375416..3375559 + 144 WP_011076574.1 hypothetical protein -
ECVR50_RS16935 () 3376110..3378311 - 2202 WP_000973519.1 Vitamin B12 transporter BtuB VF
ECVR50_RS16940 () 3378393..3379670 - 1278 WP_000750130.1 Ferredoxin--NADP reductase VF
ECVR50_RS16945 () 3379667..3381409 - 1743 WP_001015715.1 hypothetical protein VF
ECVR50_RS16950 () 3381409..3382356 - 948 WP_001287501.1 hypothetical protein VF
ECVR50_RS16955 () 3382357..3384081 - 1725 WP_001296374.1 hypothetical protein VF
ECVR50_RS16960 () 3384217..3385410 + 1194 WP_000074484.1 MFS transporter -
ECVR50_RS16965 () 3385523..3386750 - 1228 Protein_3204 IS3 family transposase IS2 Transposase
ECVR50_RS16975 () 3386809..3386997 - 189 Protein_3205 IS66 family transposase -
ECVR50_RS16980 () 3387058..3387558 + 501 Protein_3206 IS110 family transposase ISEc45 Transposase
ECVR50_RS30140 () 3389312..3389467 + 156 WP_000729638.1 hypothetical protein -
ECVR50_RS17000 () 3390278..3391261 + 984 WP_001296394.1 Inosine-5'-monophosphate dehydrogenase VF
ECVR50_RS17005 () 3391333..3392481 + 1149 WP_000905920.1 hypothetical protein VF
ECVR50_RS17010 () 3392505..3394181 + 1677 WP_001298258.1 hypothetical protein VF
ECVR50_RS17015 () 3394191..3394931 + 741 WP_000030745.1 3-deoxy-manno-octulosonate cytidylyltransferase VF
ECVR50_RS17020 () 3394928..3396955 + 2028 WP_000579517.1 hypothetical protein VF
ECVR50_RS17025 () 3396990..3398195 + 1206 WP_001161835.1 hypothetical protein VF
ECVR50_RS17030 () 3398345..3399574 - 1230 WP_000575410.1 hypothetical protein VF
ECVR50_RS17035 () 3399564..3400712 - 1149 WP_000197086.1 hypothetical protein VF
ECVR50_RS17040 () 3400705..3401880 - 1176 WP_000723251.1 hypothetical protein VF
ECVR50_RS17045 () 3401877..3403133 - 1257 WP_001259305.1 3-deoxy-manno-octulosonate cytidylyltransferase VF
ECVR50_RS17050 () 3403133..3404174 - 1042 Protein_3219 hypothetical protein VF
ECVR50_RS17055 () 3404171..3404794 - 624 WP_000038461.1 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase VF
ECVR50_RS17060 () 3404844..3405503 - 660 WP_000590258.1 hypothetical protein VF
ECVR50_RS17065 () 3405500..3406276 - 777 WP_021561886.1 hypothetical protein VF
ECVR50_RS17070 () 3407334..3407870 - 537 WP_000942826.1 hypothetical protein VF
ECVR50_RS17075 () 3407872..3409050 - 1179 WP_000097239.1 hypothetical protein VF
ECVR50_RS17080 () 3409047..3410024 - 978 WP_000633240.1 hypothetical protein VF
ECVR50_RS17085 () 3410021..3410626 - 606 WP_001254776.1 hypothetical protein VF
ECVR50_RS17090 () 3410623..3410994 - 372 WP_000820092.1 hypothetical protein VF
ECVR50_RS17095 () 3410991..3411554 - 564 WP_001115117.1 hypothetical protein VF
ECVR50_RS17100 () 3411558..3412013 - 456 WP_001087296.1 hypothetical protein VF
ECVR50_RS17105 () 3412030..3413253 - 1224 WP_001173425.1 hypothetical protein VF
ECVR50_RS17110 () 3413253..3414746 - 1494 WP_000249375.1 hypothetical protein VF
ECVR50_RS17115 () 3414746..3416806 - 2061 WP_000498847.1 hypothetical protein VF
ECVR50_RS17120 () 3416836..3417795 - 960 WP_001305091.1 hypothetical protein VF
ECVR50_RS17125 () 3417813..3418223 - 411 WP_001305092.1 type II secretion system pilot lipoprotein GspS-beta -
ECVR50_RS17130 () 3418289..3419098 - 810 WP_001335851.1 hypothetical protein VF
ECVR50_RS17135 () 3419228..3423784 - 4557 WP_001034479.1 hypothetical protein VF
ECVR50_RS17145 () 3424269..3425951 - 1683 WP_000259310.1 glycolate permease GlcA -
ECVR50_RS17150 () 3426306..3428477 - 2172 WP_000084125.1 malate synthase G -
ECVR50_RS17155 () 3428499..3428903 - 405 WP_000853256.1 protein GlcG -
ECVR50_RS17160 () 3428908..3430131 - 1224 WP_001194653.1 glycolate oxidase subunit GlcF -
ECVR50_RS17165 () 3430142..3431194 - 1053 WP_000943052.1 glycolate oxidase subunit GlcE -
ECVR50_RS17170 () 3431194..3432693 - 1500 WP_000026111.1 glycolate oxidase subunit GlcD -
ECVR50_RS17175 () 3432944..3433708 + 765 WP_001305094.1 transcriptional regulator GlcC -
ECVR50_RS17180 () 3433715..3434857 - 1143 WP_001300526.1 DNA-binding protein -
ECVR50_RS17185 () 3435228..3436949 + 1722 WP_001539705.1 2-succinylbenzoate--CoA ligase VF
ECVR50_RS17190 () 3436946..3437860 + 915 WP_001077172.1 NAD-dependent epimerase/dehydratase family protein -
ECVR50_RS17195 () 3437892..3438140 + 249 WP_000248097.1 acyl carrier protein -
ECVR50_RS17200 () 3438140..3439312 + 1173 WP_000524942.1 8-amino-7-oxononanoate synthase VF
ECVR50_RS17205 () 3439347..3440426 - 1080 WP_001296409.1 LPS export ABC transporter permease LptG -
ECVR50_RS17210 () 3440423..3441493 - 1071 WP_000779633.1 LPS export ABC transporter permease LptF -
ECVR50_RS17215 () 3441524..3442084 - 561 WP_000098713.1 YtfJ family protein -
ECVR50_RS17220 () 3442096..3442920 - 825 WP_000985005.1 hypothetical protein -
ECVR50_RS17225 () 3442920..3444269 - 1350 WP_000896889.1 lipopolysaccharide biosynthesis protein -
ECVR50_RS17230 () 3444315..3445073 - 759 WP_000339526.1 hypothetical protein -
ECVR50_RS17235 () 3445105..3445818 - 714 WP_001076272.1 thymidylate kinase -
ECVR50_RS17240 () 3445992..3446684 + 693 WP_001190797.1 thymidylate kinase -
ECVR50_RS17245 () 3446733..3448232 - 1500 WP_000933273.1 inorganic phosphate transporter PitB -
ECVR50_RS17250 () 3448524..3450383 - 1860 WP_001335854.1 bifunctional glutathionylspermidine amidase/synthase -
ECVR50_RS17255 () 3450588..3451454 + 867 WP_001295515.1 glutathione-dependent disulfide-bond oxidoreductase -
ECVR50_RS17260 () 3451524..3451772 - 249 WP_000334896.1 hydrogenase maturation factor HybG -
ECVR50_RS17265 () 3451785..3452126 - 342 WP_000544953.1 hydrogenase maturation nickel metallochaperone HypA -
ECVR50_RS17270 () 3452119..3452607 - 489 WP_000134019.1 hydrogenase-2 assembly chaperone -
ECVR50_RS17275 () 3452600..3453094 - 495 WP_001221940.1 HyaD/HybD family hydrogenase maturation endopeptidase -
ECVR50_RS17280 () 3453094..3454797 - 1704 WP_000083065.1 hydrogenase 2 large subunit -
ECVR50_RS17285 () 3454794..3455972 - 1179 WP_000017694.1 Ni/Fe-hydrogenase cytochrome b subunit -
ECVR50_RS17290 () 3455962..3456948 - 987 WP_001081870.1 hydrogenase 2 operon protein HybA -
ECVR50_RS17295 () 3456951..3458069 - 1119 WP_000145410.1 hydrogenase 2 small subunit -
ECVR50_RS17305 () 3458258..3458545 - 288 WP_001059136.1 DUF2623 domain-containing protein -
ECVR50_RS17310 () 3458664..3459551 - 888 WP_001405695.1 dienelactone hydrolase family protein -
ECVR50_RS17315 () 3459708..3460748 + 1041 WP_000262163.1 L-glyceraldehyde 3-phosphate reductase -
ECVR50_RS17320 () 3460788..3461282 - 495 WP_000439331.1 TIGR00645 family protein -
ECVR50_RS17325 () 3461473..3462357 + 885 WP_000018762.1 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase VF
ECVR50_RS17330 () 3462396..3462821 - 426 WP_001240712.1 TonB system transport protein ExbD -
ECVR50_RS17335 () 3462828..3463562 - 735 WP_000527844.1 tol-pal system-associated acyl-CoA thioesterase -
ECVR50_RS17345 () 3463814..3465001 + 1188 WP_001320425.1 cystathionine beta-lyase -
ECVR50_RS17350 () 3465141..3465800 + 660 WP_000268419.1 DedA family protein -
ECVR50_RS17355 () 3465840..3466739 - 900 WP_001298382.1 DNA-binding transcriptional regulator YqhC -
ECVR50_RS17365 () 3466933..3468096 + 1164 WP_001058802.1 alcohol dehydrogenase -
ECVR50_RS17370 () 3468201..3469028 + 828 WP_000013149.1 2,5-didehydrogluconate reductase DkgA -
ECVR50_RS17375 () 3469228..3470154 + 927 WP_000691619.1 YbjP/YqhG family protein -
ECVR50_RS17380 () 3470205..3470462 + 258 WP_000848528.1 lipoprotein YqhH -
ECVR50_RS17385 () 3470505..3472724 - 2220 WP_000095154.1 YgiQ family radical SAM protein -
ECVR50_RS17390 () 3472835..3474247 - 1413 WP_000059388.1 cell division protein FtsP -
ECVR50_RS17395 () 3474322..3475059 - 738 WP_000965712.1 1-acylglycerol-3-phosphate O-acyltransferase -
ECVR50_RS17400 () 3475293..3477551 - 2259 WP_001281881.1 DNA topoisomerase IV subunit A -
ECVR50_RS17405 () 3477689..3479296 - 1608 WP_046072893.1 ABC transporter substrate-binding protein -
ECVR50_RS17410 () 3479429..3479824 - 396 WP_000650107.1 type II toxin-antitoxin system antitoxin MqsA Antitoxin Detail
ECVR50_RS17415 () 3479826..3480122 - 297 WP_000415585.1 type II toxin-antitoxin system toxin MqsR Toxin Detail
ECVR50_RS17420 () 3480327..3480809 - 483 WP_000183505.1 transcriptional regulator -
ECVR50_RS17425 () 3480862..3481254 - 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
ECVR50_RS17430 () 3481406..3482065 + 660 WP_001221493.1 Regulator of RpoS VF
ECVR50_RS17435 () 3482062..3483411 + 1350 WP_000673357.1 two-component system sensor histidine kinase QseC -
ECVR50_RS17440 () 3483457..3483789 - 333 WP_000914691.1 DUF2645 family protein -
ECVR50_RS29460 () 3483796..3484988 - 1193 Protein_3294 Hcp family type VI secretion system effector -
ECVR50_RS17455 () 3485238..3485819 + 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
ECVR50_RS17460 () 3485850..3486164 + 315 WP_000958598.1 antibiotic biosynthesis monooxygenase -
ECVR50_RS17465 () 3486212..3488104 - 1893 WP_000195296.1 DNA topoisomerase IV subunit B -
ECVR50_RS17470 () 3488133..3488714 - 582 WP_000105733.1 esterase YqiA -
ECVR50_RS17475 () 3488714..3489541 - 828 WP_000444747.1 3',5'-cyclic-AMP phosphodiesterase -
ECVR50_RS17480 () 3489566..3489988 - 423 WP_000833393.1 DUF1249 family protein -
ECVR50_RS17485 () 3489989..3490618 - 630 WP_000917117.1 ADP-ribose diphosphatase -
ECVR50_RS17490 () 3490823..3492304 + 1482 WP_000735278.1 outer membrane channel protein TolC -
ECVR50_RS17500 () 3492452..3493123 + 672 WP_000831543.1 DUF1190 family protein -
ECVR50_RS17505 () 3493129..3494289 + 1161 WP_000442860.1 glutathionylspermidine synthase family protein -
ECVR50_RS17510 () 3494327..3495115 - 789 WP_001320780.1 4,5-DOPA dioxygenase extradiol -
ECVR50_RS17515 () 3495258..3496031 + 774 WP_001375105.1 zinc transporter ZupT -
ECVR50_RS30145 () 3496089..3496259 - 171 WP_000469266.1 hypothetical protein -
ECVR50_RS17525 () 3496521..3497174 - 654 WP_001076997.1 3,4-dihydroxy-2-butanone-4-phosphate synthase -
ECVR50_RS17530 () 3497548..3497838 + 291 WP_001295626.1 ubiquinone biosynthesis accessory factor UbiK -
ECVR50_RS17535 () 3498122..3498673 + 552 WP_001272153.1 hypothetical protein VF
ECVR50_RS17540 () 3498733..3501237 + 2505 WP_046072936.1 fimbrial biogenesis outer membrane usher protein -
ECVR50_RS17545 () 3501253..3502002 + 750 WP_001405696.1 molecular chaperone -
ECVR50_RS17550 () 3502004..3503068 + 1065 WP_046072894.1 fimbrial protein -
ECVR50_RS17555 () 3503111..3503311 - 201 WP_000350095.1 cell surface composition regulator GlgS -
ECVR50_RS17560 () 3503580..3504209 + 630 WP_000599944.1 DUF1449 family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance