MGE detailed information
MGE type: Genomic_island MGE length: 31881 bp
Accession: NZ_CP011124 Location: 2091893..2123773 Organism: Escherichia coli strain USML2 Replicon: chromosome
Accession: NZ_CP011124 Location: 2091893..2123773 Organism: Escherichia coli strain USML2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| USML2_RS10560 () | 2088077..2089345 | - | 1269 | WP_000271909.1 | L-2-hydroxyglutarate oxidase | - |
| USML2_RS10565 () | 2089365..2090342 | - | 978 | WP_000993126.1 | carbon starvation induced protein CsiD | - |
| USML2_RS23195 () | 2090678..2092930 | - | 2253 | Protein_1921 | hypothetical protein | - |
| USML2_RS23200 () | 2094316..2095689 | + | 1374 | Protein_1922 | DUF5507 domain-containing protein | - |
| USML2_RS10600 () | 2096053..2096262 | + | 210 | WP_072097107.1 | recombinase family protein | - |
| USML2_RS10610 () | 2096417..2096536 | + | 120 | WP_001120794.1 | hypothetical protein | - |
| USML2_RS10615 () | 2096601..2101181 | + | 4581 | WP_010723187.1 | putative autotransporter | VF |
| USML2_RS10620 () | 2101545..2101874 | - | 330 | WP_001094400.1 | type IV toxin-antitoxin system toxin YpjF | Toxin Detail |
| USML2_RS10625 () | 2101895..2102212 | - | 318 | WP_000072690.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| USML2_RS10630 () | 2102250..2102450 | - | 201 | WP_001395452.1 | DUF987 domain-containing protein | - |
| USML2_RS10635 () | 2102459..2102941 | - | 483 | WP_001407480.1 | RadC family protein | - |
| USML2_RS10640 () | 2102950..2103408 | - | 459 | WP_000211841.1 | antirestriction protein | - |
| USML2_RS10645 () | 2103511..2103734 | - | 224 | Protein_1931 | DUF905 family protein | - |
| USML2_RS10650 () | 2104306..2106009 | - | 1704 | WP_000896263.1 | hypothetical protein | - |
| USML2_RS10655 () | 2106151..2107160 | + | 1010 | Protein_1933 | arsenic transporter | - |
| USML2_RS10660 () | 2107173..2107487 | + | 315 | WP_000065803.1 | arsenate reductase | - |
| USML2_RS10665 () | 2107712..2108179 | - | 468 | WP_000702495.1 | hypothetical protein | - |
| USML2_RS10670 () | 2108203..2108646 | - | 444 | WP_000824222.1 | hypothetical protein | - |
| USML2_RS10675 () | 2108646..2108882 | - | 237 | WP_001144029.1 | hypothetical protein | - |
| USML2_RS10680 () | 2108923..2109624 | - | 702 | WP_000189409.1 | WYL domain-containing protein | - |
| USML2_RS10685 () | 2109841..2110662 | - | 822 | WP_000197391.1 | DUF945 domain-containing protein | - |
| USML2_RS10690 () | 2110754..2111617 | - | 864 | WP_000787597.1 | GTPase family protein | - |
| USML2_RS10695 () | 2111972..2112343 | - | 372 | WP_000461704.1 | type II toxin-antitoxin system antitoxin RnlB | Antitoxin Detail |
| USML2_RS10700 () | 2112336..2113409 | - | 1074 | WP_000155570.1 | type II toxin-antitoxin system toxin mRNA endoribonuclease RnlA | Toxin Detail |
| USML2_RS10705 () | 2113551..2113814 | + | 264 | WP_000502050.1 | DUF1524 domain-containing protein | - |
| USML2_RS10710 () | 2114174..2115790 | + | 1617 | WP_000445380.1 | anti-bacteriophage protein AbpA | - |
| USML2_RS10715 () | 2115787..2117976 | + | 2190 | WP_000136402.1 | DEAD/DEAH box helicase | - |
| USML2_RS10720 () | 2118154..2118780 | - | 627 | WP_000220524.1 | inovirus Gp2 family protein | - |
| USML2_RS10725 () | 2118933..2120342 | - | 1410 | WP_000481742.1 | DUF3987 domain-containing protein | - |
| USML2_RS10730 () | 2120471..2120683 | - | 213 | WP_001065343.1 | DNA-binding transcriptional activator AlpA | - |
| USML2_RS10735 () | 2120727..2121683 | + | 957 | WP_000510827.1 | hypothetical protein | - |
| USML2_RS10740 () | 2121927..2123168 | - | 1242 | WP_000101723.1 | Prophage integrase IntA ; Integrase | Integrase |
| USML2_RS10750 () | 2123949..2124431 | - | 483 | WP_000162574.1 | SsrA-binding protein SmpB | - |
| USML2_RS10755 () | 2124602..2125039 | + | 438 | WP_001300750.1 | type II toxin-antitoxin system toxin RatA | - |
| USML2_RS10760 () | 2125029..2125319 | + | 291 | WP_001117838.1 | RnfH family protein | - |
| USML2_RS10765 () | 2125381..2125722 | - | 342 | WP_001203437.1 | outer membrane protein assembly factor BamE | - |
| USML2_RS10770 () | 2125871..2127532 | - | 1662 | WP_000880910.1 | DNA repair protein RecN | - |
| USML2_RS10775 () | 2127618..2128496 | - | 879 | WP_001059169.1 | NAD(+) kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20085, TA20086 | HG738867 | 3996347..4028227 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285030, TA285031 | NZ_HG738867 | 3996347..4028227 | 0 |