MGE detailed information
MGE type: IS/Tn MGE length: 981 bp
Accession: NZ_CP011113 Location: 1547830..1548810 Organism: Escherichia coli strain RR1 Replicon: chromosome
Accession: NZ_CP011113 Location: 1547830..1548810 Organism: Escherichia coli strain RR1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SR35_RS08220 () | 1544030..1544791 | - | 762 | WP_000060495.1 | acid stress response transcriptional regulator YdeO | - |
| SR35_RS08225 () | 1544866..1545063 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| SR35_RS08230 () | 1545311..1547590 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| SR35_RS08240 () | 1547830..1548810 | - | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| SR35_RS08245 () | 1549123..1550037 | - | 915 | WP_000520676.1 | fimbrial protein | - |
| SR35_RS08250 () | 1550096..1550599 | - | 504 | WP_000825452.1 | type 1 fimbrial protein | - |
| SR35_RS08255 () | 1550612..1551142 | - | 531 | WP_000876763.1 | type 1 fimbrial protein | - |
| SR35_RS08260 () | 1551156..1552382 | - | 1227 | Protein_1462 | fimbrial biogenesis outer membrane usher protein | - |
| SR35_RS08265 () | 1552637..1552845 | - | 209 | Protein_1463 | helix-turn-helix transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | IS/Tn | TA6348 | CP009789 | 3666255..3667235 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | IS/Tn | TA6364 | NC_000913 | 3652182..3653162 | 0 |