MGE detailed information
MGE type: Prophage MGE length: 20225 bp
Accession: NZ_CP010905 Location: 2642986..2663210 Organism: Clostridioides difficile 630 Replicon: chromosome
Accession: NZ_CP010905 Location: 2642986..2663210 Organism: Clostridioides difficile 630 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDIF630_RS12705 () | 2638203..2638904 | + | 702 | WP_004454563.1 | AzlC family ABC transporter permease | - |
| CDIF630_RS12710 () | 2638897..2639220 | + | 324 | WP_011861511.1 | AzlD domain-containing protein | - |
| CDIF630_RS12715 () | 2639426..2641486 | - | 2061 | WP_009897457.1 | sensor histidine kinase | - |
| CDIF630_RS12725 () | 2641682..2642374 | - | 693 | WP_004454566.1 | response regulator transcription factor | - |
| CDIF630_RS12730 () | 2642986..2643360 | - | 375 | WP_009897458.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| CDIF630_RS12735 () | 2643579..2643812 | + | 234 | WP_003423177.1 | hypothetical protein | VF |
| CDIF630_RS12740 () | 2643796..2644209 | + | 414 | WP_009897459.1 | hypothetical protein | - |
| CDIF630_RS12745 () | 2644228..2644524 | + | 297 | WP_011861513.1 | hypothetical protein | - |
| CDIF630_RS12750 () | 2644807..2645124 | + | 318 | WP_009897465.1 | hypothetical protein | - |
| CDIF630_RS12755 () | 2645260..2645724 | + | 465 | WP_011861514.1 | hypothetical protein | - |
| CDIF630_RS20555 () | 2646052..2646213 | - | 162 | WP_004454578.1 | hypothetical protein | - |
| CDIF630_RS12770 () | 2646265..2647078 | - | 814 | Protein_2374 | toxin Bro | - |
| CDIF630_RS20560 () | 2647198..2647350 | - | 153 | WP_021361915.1 | hypothetical protein | - |
| CDIF630_RS12775 () | 2648759..2649682 | - | 924 | WP_011861517.1 | SHOCT domain-containing protein | - |
| - () | 2649826..2649955 | + | 130 | NuclAT_9 | - | Antitoxin Detail |
| CDIF630_RS20565 () | 2649876..2650028 | - | 153 | WP_004454589.1 | hypothetical protein | Toxin Detail |
| CDIF630_RS12785 () | 2650302..2650625 | - | 324 | WP_009897482.1 | hypothetical protein | - |
| CDIF630_RS12790 () | 2650661..2650915 | - | 255 | WP_004454592.1 | hypothetical protein | - |
| CDIF630_RS12795 () | 2651351..2651869 | - | 519 | Protein_2380 | IS200-IS605 family transposase ISEfa4 | Transposase |
| CDIF630_RS20280 () | 2652159..2652534 | - | 376 | Protein_2381 | BlaI/MecI/CopY family transcriptional regulator | - |
| CDIF630_RS12805 () | 2652639..2653016 | - | 378 | WP_011861518.1 | BlaI/MecI/CopY family transcriptional regulator | - |
| CDIF630_RS12810 () | 2653820..2654314 | + | 495 | WP_011861519.1 | Type II secretion system protein G | VF |
| CDIF630_RS20285 () | 2654703..2654873 | + | 171 | WP_004454601.1 | hypothetical protein | - |
| CDIF630_RS12815 () | 2655350..2655539 | - | 190 | Protein_2385 | IS3 family transposase ISEfa10 | Transposase |
| CDIF630_RS12820 () | 2655701..2656051 | + | 351 | WP_011861520.1 | DUF3796 domain-containing protein | - |
| CDIF630_RS12825 () | 2656053..2656253 | + | 201 | WP_003423163.1 | hypothetical protein | VF |
| CDIF630_RS20570 () | 2656576..2656752 | + | 177 | WP_009890506.1 | hypothetical protein | - |
| CDIF630_RS12835 () | 2656977..2657177 | + | 201 | WP_003423148.1 | cold-shock protein | - |
| CDIF630_RS12840 () | 2657812..2658624 | + | 813 | WP_004454609.1 | molybdate ABC transporter substrate-binding protein | - |
| CDIF630_RS12845 () | 2658634..2659425 | + | 792 | WP_011861521.1 | ABC transporter permease | - |
| CDIF630_RS12850 () | 2659427..2660122 | + | 696 | WP_011861522.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| CDIF630_RS12855 () | 2660109..2660840 | + | 732 | WP_009890514.1 | membrane protein | - |
| CDIF630_RS12860 () | 2661154..2661954 | + | 801 | WP_004454616.1 | PIG-L family deacetylase | - |
| CDIF630_RS12865 () | 2662494..2663210 | + | 717 | WP_004454617.1 | Transcriptional regulatory protein WalR | VF |
| CDIF630_RS12870 () | 2663179..2664768 | + | 1590 | WP_021361920.1 | sensor histidine kinase | - |
| CDIF630_RS12875 () | 2665080..2666582 | - | 1503 | WP_004454621.1 | phosphoglucomutase | - |
| CDIF630_RS12880 () | 2666692..2667357 | - | 666 | WP_003430699.1 | ribulose-phosphate 3-epimerase | - |
| CDIF630_RS12885 () | 2667387..2667833 | - | 447 | WP_003430700.1 | ribose 5-phosphate isomerase B | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Clostridium difficile 630 | Prophage | TA10176 | NC_009089 | 2658361..2675497 | 0.004 |