MGE detailed information
MGE type: Conjugative plasmid MGE length: 83905 bp
Accession: NZ_CP010831 Location: 1..83905 Organism: Shigella sonnei strain FORC_011 Replicon: plasmid pFORC11.2
Accession: NZ_CP010831 Location: 1..83905 Organism: Shigella sonnei strain FORC_011 Replicon: plasmid pFORC11.2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC11_RS26485 (71) | 71..1225 | + | 1155 | WP_001139955.1 | site-specific integrase | - |
| FORC11_RS26490 (1376) | 1376..2200 | + | 825 | WP_001690630.1 | conjugal transfer protein TraE | - |
| FORC11_RS26495 (2286) | 2286..3488 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| FORC11_RS26500 (3548) | 3548..4132 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| FORC11_RS26505 (4527) | 4527..4985 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| FORC11_RS26510 (4982) | 4982..5800 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| FORC11_RS26515 (5797) | 5797..6945 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| FORC11_RS30460 (6942) | 6942..7232 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| FORC11_RS26520 (7247) | 7247..7798 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| FORC11_RS26525 (7888) | 7888..11655 | + | 3768 | WP_001141534.1 | DUF5710 domain-containing protein | - |
| FORC11_RS26530 (11673) | 11673..12020 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| FORC11_RS26535 (12017) | 12017..12709 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| FORC11_RS26540 (12720) | 12720..13703 | + | 984 | WP_001191880.1 | hypothetical protein | VF |
| FORC11_RS26545 (13706) | 13706..14995 | + | 1290 | WP_001271991.1 | conjugal transfer protein TraO | - |
| FORC11_RS26550 (14995) | 14995..15699 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| FORC11_RS26555 (15699) | 15699..16226 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| FORC11_RS26560 (16277) | 16277..16681 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| FORC11_RS26565 (16745) | 16745..16933 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| FORC11_RS26570 (16917) | 16917..17717 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| FORC11_RS26575 (17807) | 17807..20851 | + | 3045 | WP_001024752.1 | IncI1-type conjugal transfer protein TraU | - |
| FORC11_RS26580 (20851) | 20851..21465 | + | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| FORC11_RS26585 (21432) | 21432..22634 | + | 1203 | WP_001189159.1 | IncI1-type conjugal transfer protein TraW | - |
| FORC11_RS26590 (22663) | 22663..23247 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| FORC11_RS26595 (23344) | 23344..25512 | + | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| FORC11_RS26600 (25588) | 25588..26202 | + | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| FORC11_RS26605 (26300) | 26300..26509 | + | 210 | WP_001140545.1 | hemolysin expression modulator Hha | - |
| FORC11_RS33740 (26718) | 26718..26894 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| - (27380) | 27380..27431 | + | 52 | NuclAT_1 | - | - |
| - (27380) | 27380..27431 | + | 52 | NuclAT_1 | - | - |
| - (27380) | 27380..27431 | + | 52 | NuclAT_1 | - | - |
| - (27380) | 27380..27431 | + | 52 | NuclAT_1 | - | - |
| FORC11_RS26620 (27818) | 27818..28069 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| FORC11_RS26625 (28141) | 28141..28293 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - (28343) | 28343..28405 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (28343) | 28343..28405 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (28343) | 28343..28405 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (28343) | 28343..28405 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| FORC11_RS26630 (28585) | 28585..29793 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| FORC11_RS26635 (29812) | 29812..30882 | + | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| FORC11_RS26640 (30875) | 30875..33166 | + | 2292 | WP_094190802.1 | F-type conjugative transfer protein TrbC | - |
| FORC11_RS26645 (33203) | 33203..35902 | - | 2700 | WP_001306778.1 | Protein TraI | Relaxase |
| FORC11_RS26650 (35913) | 35913..36245 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| FORC11_RS26655 (36479) | 36479..36814 | + | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| FORC11_RS26660 (36900) | 36900..37748 | - | 849 | WP_032220727.1 | DUF4942 domain-containing protein | - |
| FORC11_RS26665 (38327) | 38327..38578 | + | 252 | WP_000148280.1 | helix-turn-helix transcriptional regulator | - |
| FORC11_RS26670 (38609) | 38609..38854 | - | 246 | WP_073853190.1 | hypothetical protein | - |
| FORC11_RS26675 (38854) | 38854..39768 | - | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| FORC11_RS26680 (39833) | 39833..40099 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| FORC11_RS26685 (40192) | 40192..40626 | - | 435 | WP_000218858.1 | hypothetical protein | - |
| FORC11_RS26690 (41355) | 41355..41855 | - | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| FORC11_RS26700 (42318) | 42318..42914 | - | 597 | WP_000978012.1 | hypothetical protein | - |
| FORC11_RS26705 (42911) | 42911..43630 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| FORC11_RS26710 (43627) | 43627..44061 | - | 435 | WP_039510693.1 | conjugation system SOS inhibitor PsiB | - |
| FORC11_RS26715 (44116) | 44116..46074 | - | 1959 | WP_001749200.1 | ParB/RepB/Spo0J family partition protein | - |
| FORC11_RS26720 (46136) | 46136..46369 | - | 234 | WP_001042948.1 | DUF905 domain-containing protein | - |
| FORC11_RS26725 (46426) | 46426..46953 | - | 528 | WP_001276121.1 | single-stranded DNA-binding protein | - |
| FORC11_RS26730 (47723) | 47723..47914 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| FORC11_RS26735 (47911) | 47911..48333 | - | 423 | WP_001587500.1 | DUF1380 family protein | - |
| FORC11_RS26740 (48380) | 48380..48805 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| FORC11_RS33045 (49222) | 49222..49992 | - | 771 | WP_001434682.1 | hypothetical protein | - |
| FORC11_RS26750 (50043) | 50043..50509 | - | 467 | Protein_53 | DUF1380 family protein | - |
| FORC11_RS26755 (50490) | 50490..50711 | - | 222 | WP_001104885.1 | hypothetical protein | - |
| FORC11_RS26760 (50712) | 50712..51395 | - | 684 | WP_030003447.1 | DNA methylase | - |
| FORC11_RS32530 (51471) | 51471..51776 | - | 306 | WP_015058890.1 | hypothetical protein | - |
| FORC11_RS26770 (51780) | 51780..52682 | - | 903 | WP_139336812.1 | DUF1281 domain-containing protein | - |
| FORC11_RS26775 (53100) | 53100..53348 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| FORC11_RS26780 (53345) | 53345..53782 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| FORC11_RS26785 (53782) | 53782..55056 | + | 1275 | WP_000457498.1 | Y-family DNA polymerase | - |
| FORC11_RS26790 (55058) | 55058..55474 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| FORC11_RS26795 (55467) | 55467..56447 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| FORC11_RS26800 (56861) | 56861..57169 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| FORC11_RS26805 (57256) | 57256..57900 | - | 645 | WP_001144036.1 | ParA family protein | - |
| FORC11_RS26810 (58080) | 58080..58859 | - | 780 | WP_001164198.1 | site-specific integrase | - |
| FORC11_RS26815 (58861) | 58861..59274 | - | 414 | WP_000465043.1 | hypothetical protein | - |
| FORC11_RS26825 (59842) | 59842..60096 | + | 255 | WP_000343106.1 | hypothetical protein | - |
| FORC11_RS26830 (60096) | 60096..60686 | + | 591 | WP_001401589.1 | hypothetical protein | - |
| FORC11_RS26835 (60899) | 60899..61951 | + | 1053 | WP_000655519.1 | hypothetical protein | - |
| FORC11_RS26840 (62127) | 62127..62729 | + | 603 | WP_000521606.1 | ProQ/FINO family protein | - |
| FORC11_RS26845 (62785) | 62785..63279 | + | 495 | WP_015058884.1 | hypothetical protein | - |
| FORC11_RS33745 (63279) | 63279..63545 | + | 267 | WP_000627832.1 | hypothetical protein | - |
| FORC11_RS26855 (63737) | 63737..64018 | - | 282 | WP_001105066.1 | hypothetical protein | - |
| FORC11_RS26860 (64124) | 64124..64399 | - | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| FORC11_RS26865 (64399) | 64399..64683 | - | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| FORC11_RS26870 (65587) | 65587..66618 | - | 1032 | WP_000907867.1 | plasmid replication initiator RepA | - |
| FORC11_RS33750 (67576) | 67576..67734 | + | 159 | Protein_77 | ash family protein | - |
| FORC11_RS26885 (67772) | 67772..68059 | + | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| FORC11_RS26890 (68501) | 68501..69034 | + | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| FORC11_RS26895 (69288) | 69288..69971 | + | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| FORC11_RS26900 (70143) | 70143..70517 | + | 375 | WP_001690634.1 | PilI type IV pilus biogenesis protein | - |
| FORC11_RS26910 (71489) | 71489..72556 | + | 1068 | WP_001360287.1 | hypothetical protein | VF |
| FORC11_RS26915 (72556) | 72556..72993 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| FORC11_RS26920 (73007) | 73007..74689 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| FORC11_RS26925 (74682) | 74682..75977 | + | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| FORC11_RS26930 (75964) | 75964..76416 | + | 453 | WP_001247337.1 | hypothetical protein | VF |
| FORC11_RS26935 (76427) | 76427..77980 | + | 1554 | WP_000362206.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| FORC11_RS26940 (77993) | 77993..79078 | + | 1086 | WP_001208802.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| FORC11_RS26945 (79095) | 79095..79709 | + | 615 | WP_000908226.1 | hypothetical protein | VF |
| FORC11_RS26950 (79719) | 79719..80279 | + | 561 | WP_000014005.1 | hypothetical protein | VF |
| FORC11_RS26955 (80264) | 80264..80920 | + | 657 | WP_001193549.1 | hypothetical protein | VF |
| FORC11_RS26960 (80920) | 80920..82008 | + | 1089 | Protein_92 | hypothetical protein | VF |
| FORC11_RS33050 (82208) | 82208..82456 | - | 249 | WP_001349157.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|