MGE detailed information
MGE type: Prophage MGE length: 69721 bp
Accession: NZ_CP010526 Location: 1596900..1666620 Organism: Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145 Replicon: chromosome
Accession: NZ_CP010526 Location: 1596900..1666620 Organism: Staphylococcus aureus subsp. aureus ST772-MRSA-V strain DAR4145 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RU53_RS07795 () | 1593161..1594540 | - | 1380 | WP_000902108.1 | ATP-dependent DNA helicase | - |
| RU53_RS07800 () | 1594530..1595483 | - | 954 | WP_001163809.1 | helix-turn-helix domain-containing protein | - |
| RU53_RS07805 () | 1595591..1595839 | + | 249 | WP_001151997.1 | ferredoxin | - |
| RU53_RS07810 () | 1595945..1596490 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| RU53_RS07820 () | 1596900..1597814 | - | 915 | WP_000476340.1 | DUF1672 domain-containing protein | - |
| RU53_RS07825 () | 1597871..1598788 | - | 918 | WP_000476881.1 | DUF1672 domain-containing protein | - |
| RU53_RS07830 () | 1598846..1599751 | - | 906 | WP_001837492.1 | DUF1672 domain-containing protein | - |
| RU53_RS07835 () | 1599842..1600027 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| RU53_RS07840 () | 1600276..1601259 | - | 984 | WP_024937002.1 | Leucotoxin LukDv | VF |
| RU53_RS07845 () | 1601255..1602193 | - | 939 | WP_000239544.1 | Gamma-hemolysin component C | VF |
| RU53_RS07850 () | 1602583..1604037 | - | 1455 | WP_000909197.1 | N-acetylmuramoyl-L-alanine amidase | - |
| RU53_RS07855 () | 1604048..1604350 | - | 303 | WP_000992284.1 | phage holin | Toxin Detail |
| RU53_RS15295 () | 1604401..1604508 | + | 108 | WP_031867548.1 | hypothetical protein | - |
| - () | 1604430..1604569 | + | 140 | NuclAT_0 | - | - |
| - () | 1604430..1604569 | + | 140 | NuclAT_0 | - | - |
| - () | 1604430..1604569 | + | 140 | NuclAT_0 | - | - |
| - () | 1604430..1604569 | + | 140 | NuclAT_0 | - | - |
| RU53_RS07865 () | 1604517..1604738 | - | 222 | WP_073391028.1 | putative holin-like toxin | Toxin Detail |
| RU53_RS07870 () | 1604847..1605620 | - | 774 | WP_000750407.1 | Enterotoxin type A | VF |
| RU53_RS07875 () | 1606041..1606415 | - | 375 | WP_000340977.1 | hypothetical protein | - |
| RU53_RS07880 () | 1606471..1606758 | - | 288 | WP_001262620.1 | hypothetical protein | - |
| RU53_RS15300 () | 1606804..1606956 | - | 153 | WP_001000058.1 | hypothetical protein | - |
| RU53_RS07890 () | 1606949..1610731 | - | 3783 | WP_000582187.1 | hypothetical protein | - |
| RU53_RS07895 () | 1610747..1612231 | - | 1485 | WP_000567390.1 | phage tail family protein | - |
| RU53_RS07900 () | 1612228..1616772 | - | 4545 | WP_000504562.1 | phage tail tape measure protein | - |
| RU53_RS16285 () | 1616829..1616966 | - | 138 | WP_001837493.1 | hypothetical protein | - |
| RU53_RS07910 () | 1617017..1617367 | - | 351 | WP_001096355.1 | hypothetical protein | - |
| RU53_RS15305 () | 1617417..1617641 | - | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| RU53_RS07915 () | 1617683..1618327 | - | 645 | WP_000268740.1 | phage tail protein | - |
| RU53_RS07920 () | 1618328..1618735 | - | 408 | WP_000565498.1 | hypothetical protein | - |
| RU53_RS07925 () | 1618732..1619136 | - | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| RU53_RS07930 () | 1619133..1619495 | - | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| RU53_RS07935 () | 1619479..1619763 | - | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| RU53_RS07940 () | 1619753..1620037 | - | 285 | WP_000238236.1 | hypothetical protein | - |
| RU53_RS07945 () | 1620057..1621202 | - | 1146 | WP_000154559.1 | phage major capsid protein | - |
| RU53_RS07950 () | 1621226..1621963 | - | 738 | WP_000642726.1 | Clp protease ClpP | - |
| RU53_RS07955 () | 1621947..1623134 | - | 1188 | WP_000025277.1 | phage portal protein | - |
| RU53_RS07960 () | 1623150..1624811 | - | 1662 | WP_000625088.1 | terminase large subunit | - |
| RU53_RS07965 () | 1624808..1625152 | - | 345 | WP_000402904.1 | hypothetical protein | - |
| RU53_RS07970 () | 1625282..1625581 | - | 300 | WP_000988336.1 | HNH endonuclease | - |
| RU53_RS07975 () | 1625813..1626229 | - | 417 | WP_000590122.1 | hypothetical protein | - |
| RU53_RS07980 () | 1626257..1626457 | - | 201 | WP_000265042.1 | DUF1514 family protein | - |
| RU53_RS07985 () | 1626457..1626606 | - | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| RU53_RS07990 () | 1626603..1626989 | - | 387 | WP_000592207.1 | hypothetical protein | - |
| RU53_RS07995 () | 1626986..1627192 | - | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| RU53_RS08000 () | 1627189..1627434 | - | 246 | WP_001282074.1 | hypothetical protein | - |
| RU53_RS08005 () | 1627471..1628013 | - | 543 | WP_000185660.1 | dUTP pyrophosphatase | - |
| RU53_RS08010 () | 1628006..1628188 | - | 183 | WP_000028422.1 | hypothetical protein | - |
| RU53_RS08015 () | 1628178..1628429 | - | 252 | WP_001837494.1 | DUF1024 family protein | Toxin Detail |
| RU53_RS08020 () | 1628422..1628706 | - | 285 | WP_001105620.1 | hypothetical protein | - |
| RU53_RS08025 () | 1628703..1629152 | - | 450 | WP_000982708.1 | hypothetical protein | - |
| RU53_RS08030 () | 1629217..1629459 | - | 243 | WP_000131386.1 | phi PVL orf 51-like protein | - |
| RU53_RS08035 () | 1629463..1629819 | - | 357 | WP_000029376.1 | hypothetical protein | - |
| RU53_RS08040 () | 1629820..1630005 | - | 186 | WP_001187245.1 | DUF3113 family protein | - |
| RU53_RS08045 () | 1630010..1630414 | - | 405 | WP_000049795.1 | DUF1064 domain-containing protein | - |
| RU53_RS08050 () | 1630424..1630645 | - | 222 | WP_001123695.1 | DUF3269 family protein | - |
| RU53_RS15310 () | 1630659..1630817 | - | 159 | WP_000256597.1 | hypothetical protein | - |
| RU53_RS08060 () | 1630811..1631590 | - | 780 | WP_000803063.1 | ATP-binding protein | - |
| RU53_RS08065 () | 1631600..1632370 | - | 771 | WP_000190254.1 | conserved phage C-terminal domain-containing protein | - |
| RU53_RS08070 () | 1632436..1632717 | + | 282 | WP_000414755.1 | hypothetical protein | - |
| RU53_RS16290 () | 1632710..1632859 | - | 150 | WP_001081076.1 | hypothetical protein | - |
| RU53_RS08075 () | 1632856..1633527 | - | 672 | WP_001199422.1 | hypothetical protein | - |
| RU53_RS08080 () | 1633540..1634091 | - | 552 | WP_000704705.1 | single-stranded DNA-binding protein | - |
| RU53_RS08085 () | 1634120..1634908 | - | 789 | WP_000134097.1 | ATP-binding protein | - |
| RU53_RS08090 () | 1634901..1635122 | - | 222 | WP_000815403.1 | DUF2483 family protein | - |
| RU53_RS08095 () | 1635132..1635392 | - | 261 | WP_000291066.1 | DUF1108 family protein | - |
| RU53_RS08100 () | 1635484..1635804 | - | 321 | WP_000219665.1 | hypothetical protein | - |
| RU53_RS15315 () | 1635805..1635972 | - | 168 | WP_001285950.1 | DUF1270 domain-containing protein | - |
| RU53_RS08110 () | 1635984..1636247 | - | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| RU53_RS08115 () | 1636277..1636495 | - | 219 | WP_001038398.1 | hypothetical protein | - |
| RU53_RS08120 () | 1636492..1636818 | - | 327 | WP_001025595.1 | hypothetical protein | - |
| RU53_RS16295 () | 1636895..1637032 | - | 138 | WP_001662405.1 | hypothetical protein | - |
| RU53_RS08125 () | 1637052..1637312 | - | 261 | WP_000435343.1 | hypothetical protein | - |
| RU53_RS08130 () | 1637325..1638122 | - | 798 | WP_001148574.1 | phage antirepressor Ant | - |
| RU53_RS08135 () | 1638138..1638380 | - | 243 | WP_000639925.1 | DUF739 family protein | - |
| RU53_RS08140 () | 1638544..1639260 | + | 717 | WP_001083970.1 | LexA family transcriptional regulator | - |
| RU53_RS08145 () | 1639278..1639721 | + | 444 | WP_000037409.1 | hypothetical protein | - |
| RU53_RS16300 () | 1639752..1639907 | + | 156 | WP_000345951.1 | hypothetical protein | - |
| RU53_RS08150 () | 1639894..1640079 | + | 186 | WP_001089803.1 | hypothetical protein | - |
| RU53_RS08155 () | 1640137..1640340 | - | 204 | WP_000477304.1 | hypothetical protein | - |
| RU53_RS08160 () | 1640368..1641249 | + | 882 | WP_000683724.1 | hypothetical protein | - |
| RU53_RS08165 () | 1641327..1642532 | + | 1206 | WP_000264740.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| RU53_RS08170 () | 1642575..1644602 | - | 2028 | WP_001829176.1 | hypothetical protein | - |
| RU53_RS08175 () | 1644614..1645522 | - | 909 | WP_001793476.1 | DUF1672 domain-containing protein | - |
| RU53_RS08180 () | 1645767..1647518 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| RU53_RS08185 () | 1647499..1648224 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| RU53_RS08190 () | 1648357..1649094 | - | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| RU53_RS08195 () | 1649087..1649629 | - | 543 | WP_000368656.1 | SMC-Scp complex subunit ScpB | - |
| RU53_RS08200 () | 1649622..1650353 | - | 732 | WP_000273375.1 | segregation/condensation protein A | - |
| RU53_RS08205 () | 1650445..1650951 | + | 507 | WP_001183435.1 | DUF309 domain-containing protein | - |
| RU53_RS08210 () | 1651029..1651916 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| RU53_RS08215 () | 1651965..1652414 | - | 450 | WP_000392690.1 | transcriptional repressor | - |
| RU53_RS08220 () | 1652519..1653061 | - | 543 | WP_000365235.1 | NUDIX hydrolase | - |
| RU53_RS08225 () | 1653143..1654051 | + | 909 | WP_001171340.1 | aldo/keto reductase | - |
| RU53_RS08230 () | 1654267..1654515 | - | 249 | WP_000995802.1 | hypothetical protein | - |
| RU53_RS08235 () | 1654531..1655286 | - | 756 | WP_040968906.1 | SDR family oxidoreductase | - |
| RU53_RS08240 () | 1655428..1656243 | + | 816 | WP_000779749.1 | pyrroline-5-carboxylate reductase | - |
| RU53_RS08245 () | 1656346..1657266 | - | 921 | WP_000454065.1 | ribonuclease Z | - |
| RU53_RS08250 () | 1657579..1659063 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| RU53_RS08255 () | 1659293..1660159 | + | 867 | WP_001837502.1 | AraC family transcriptional regulator | - |
| RU53_RS08260 () | 1660241..1661890 | - | 1650 | WP_001041917.1 | alpha-glucosidase | - |
| RU53_RS08265 () | 1661906..1662925 | - | 1020 | WP_000256316.1 | HTH-type transcriptional regulator MalR | VF |
| RU53_RS16185 () | 1662926..1663099 | - | 174 | WP_048538637.1 | hypothetical protein | - |
| RU53_RS08280 () | 1663245..1664560 | + | 1316 | Protein_1596 | ISL3 family transposase ISSau8 | Transposase |
| RU53_RS08285 () | 1664624..1664995 | - | 372 | WP_000413427.1 | VOC family protein | - |
| RU53_RS08290 () | 1665214..1666620 | - | 1407 | WP_000193707.1 | 6-phosphogluconate dehydrogenase, decarboxylating | VF |
| RU53_RS08295 () | 1666688..1667821 | - | 1134 | WP_000606685.1 | tripeptidase T | - |
| RU53_RS08300 () | 1668084..1668263 | + | 180 | WP_001804902.1 | stressosome-associated protein Prli42 | - |
| RU53_RS08305 () | 1668390..1669370 | - | 981 | WP_000916195.1 | aromatic acid exporter family protein | - |
| RU53_RS08310 () | 1669384..1669821 | - | 438 | WP_000367419.1 | BrxA/BrxB family bacilliredoxin | - |
| RU53_RS08315 () | 1670172..1671446 | - | 1275 | WP_000406841.1 | 2-oxo acid dehydrogenase subunit E2 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|