MGE detailed information
MGE type: Prophage MGE length: 64827 bp
Accession: NZ_CP010402 Location: 1504696..1569522 Organism: Staphylococcus aureus strain GR2 Replicon: chromosome
Accession: NZ_CP010402 Location: 1504696..1569522 Organism: Staphylococcus aureus strain GR2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RT44_RS07220 () | 1500092..1500340 | + | 249 | WP_001151997.1 | ferredoxin | - |
| RT44_RS07225 () | 1500446..1500991 | - | 546 | WP_001186901.1 | ECF transporter S component | - |
| RT44_RS07230 () | 1501270..1501401 | - | 132 | Protein_1383 | hypothetical protein | - |
| RT44_RS07235 () | 1501600..1502514 | - | 915 | WP_000913220.1 | DUF1672 domain-containing protein | - |
| RT44_RS15085 () | 1502589..1502735 | - | 147 | WP_001033756.1 | hypothetical protein | - |
| RT44_RS07245 () | 1502728..1503642 | - | 915 | WP_000476884.1 | DUF1672 domain-containing protein | - |
| RT44_RS07250 () | 1503700..1504605 | - | 906 | WP_000476850.1 | DUF1672 domain-containing protein | - |
| RT44_RS07255 () | 1504696..1504881 | - | 186 | WP_000470336.1 | hypothetical protein | - |
| RT44_RS07260 () | 1505130..1506113 | - | 984 | WP_024937002.1 | Panton-Valentine bi-component leukocidin subunit F | - |
| RT44_RS07265 () | 1506109..1507047 | - | 939 | WP_000239544.1 | Panton-Valentine bi-component leukocidin subunit S | - |
| RT44_RS07270 () | 1507437..1508891 | - | 1455 | WP_000909199.1 | N-acetylmuramoyl-L-alanine amidase | - |
| RT44_RS07275 () | 1508902..1509204 | - | 303 | WP_000339141.1 | phage holin | - |
| RT44_RS07280 () | 1509340..1509639 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| RT44_RS07285 () | 1509685..1509849 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| RT44_RS07290 () | 1509842..1510231 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| RT44_RS07295 () | 1510231..1511697 | - | 1467 | WP_000067154.1 | BppU family phage baseplate upper protein | - |
| RT44_RS07300 () | 1511697..1513607 | - | 1911 | WP_000429549.1 | hypothetical protein | - |
| RT44_RS07305 () | 1513623..1513913 | - | 291 | WP_000179864.1 | hypothetical protein | - |
| RT44_RS07310 () | 1513913..1515496 | - | 1584 | WP_000384478.1 | prophage endopeptidase tail family protein | - |
| RT44_RS07315 () | 1515505..1516329 | - | 825 | WP_001190531.1 | phage tail family protein | - |
| RT44_RS07320 () | 1516329..1522505 | - | 6177 | WP_054170575.1 | phage tail tape measure protein | - |
| RT44_RS07325 () | 1522519..1522677 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| RT44_RS07330 () | 1522728..1523069 | - | 342 | WP_000589166.1 | hypothetical protein | - |
| RT44_RS07335 () | 1523127..1523582 | - | 456 | WP_000169128.1 | Ig domain-containing protein | - |
| RT44_RS07340 () | 1523674..1524315 | - | 642 | WP_000807536.1 | tail protein | - |
| RT44_RS07345 () | 1524350..1524745 | - | 396 | WP_001023809.1 | hypothetical protein | - |
| RT44_RS07350 () | 1524746..1525147 | - | 402 | WP_000110019.1 | hypothetical protein | - |
| RT44_RS07355 () | 1525144..1525476 | - | 333 | WP_000395499.1 | hypothetical protein | - |
| RT44_RS07360 () | 1525488..1525766 | - | 279 | WP_000050977.1 | head-tail connector protein | - |
| RT44_RS07365 () | 1525835..1526998 | - | 1164 | WP_001142734.1 | phage major capsid protein | - |
| RT44_RS07370 () | 1527010..1527783 | - | 774 | WP_000061873.1 | Clp protease ClpP | - |
| RT44_RS07375 () | 1527767..1529005 | - | 1239 | WP_001100669.1 | phage portal protein | - |
| RT44_RS07380 () | 1529010..1530701 | - | 1692 | WP_000153551.1 | terminase large subunit | - |
| RT44_RS07385 () | 1530691..1530996 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| RT44_RS07390 () | 1531123..1531437 | - | 315 | WP_000160685.1 | HNH endonuclease | - |
| RT44_RS07395 () | 1531594..1532031 | - | 438 | WP_000528510.1 | transcriptional regulator | - |
| RT44_RS07400 () | 1532044..1533411 | - | 1368 | WP_001793488.1 | DEAD/DEAH box helicase | - |
| RT44_RS07405 () | 1533392..1533682 | - | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| RT44_RS07410 () | 1533816..1533914 | + | 99 | WP_001801650.1 | hypothetical protein | - |
| RT44_RS07415 () | 1534023..1536470 | - | 2448 | WP_033845302.1 | virulence-associated E family protein | - |
| RT44_RS07420 () | 1536522..1536722 | - | 201 | WP_000265256.1 | DUF1514 family protein | - |
| RT44_RS07425 () | 1536790..1536942 | - | 153 | WP_000237866.1 | transcriptional activator RinB | - |
| RT44_RS07430 () | 1536945..1537145 | - | 201 | WP_001125019.1 | hypothetical protein | - |
| RT44_RS07435 () | 1537111..1537308 | - | 198 | WP_000195818.1 | DUF1381 domain-containing protein | - |
| RT44_RS07440 () | 1537325..1537498 | - | 174 | WP_001209220.1 | hypothetical protein | - |
| RT44_RS07445 () | 1537535..1538062 | - | 528 | WP_000181816.1 | dUTP pyrophosphatase | - |
| RT44_RS07450 () | 1538055..1538297 | - | 243 | WP_000700108.1 | hypothetical protein | - |
| RT44_RS07455 () | 1538287..1538523 | - | 237 | WP_000370296.1 | DUF1024 family protein | - |
| RT44_RS15215 () | 1538516..1538683 | - | 168 | WP_001813803.1 | hypothetical protein | - |
| RT44_RS07460 () | 1538695..1538943 | - | 249 | WP_000178883.1 | phi PVL orf 51-like protein | - |
| RT44_RS07465 () | 1538952..1539152 | - | 201 | WP_000235381.1 | hypothetical protein | - |
| RT44_RS07470 () | 1539155..1539412 | - | 258 | WP_000111488.1 | DUF3310 domain-containing protein | - |
| RT44_RS07475 () | 1539412..1539813 | - | 402 | WP_000113978.1 | PVL family protein | - |
| RT44_RS07480 () | 1539813..1539998 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| RT44_RS07485 () | 1540011..1541963 | - | 1953 | WP_001796208.1 | DNA polymerase | - |
| RT44_RS07490 () | 1542032..1542589 | - | 558 | WP_000645042.1 | DUF2815 family protein | - |
| RT44_RS07495 () | 1542615..1543781 | - | 1167 | WP_000762551.1 | DUF2800 domain-containing protein | - |
| RT44_RS07500 () | 1543778..1544140 | - | 363 | WP_000279446.1 | hypothetical protein | - |
| RT44_RS07505 () | 1544155..1544478 | - | 324 | WP_000175000.1 | hypothetical protein | - |
| RT44_RS07510 () | 1544558..1544719 | - | 162 | WP_001285955.1 | DUF1270 family protein | - |
| RT44_RS07515 () | 1544732..1544995 | - | 264 | WP_001124160.1 | helix-turn-helix domain-containing protein | - |
| RT44_RS07520 () | 1545020..1545235 | - | 216 | WP_001036301.1 | hypothetical protein | - |
| RT44_RS07525 () | 1545290..1545655 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| RT44_RS07530 () | 1545624..1545869 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| RT44_RS07535 () | 1545885..1546133 | - | 249 | WP_000272861.1 | helix-turn-helix domain-containing protein | - |
| RT44_RS07540 () | 1546297..1546620 | + | 324 | WP_001260486.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| RT44_RS07545 () | 1546633..1547094 | + | 462 | WP_000525006.1 | hypothetical protein | Toxin Detail |
| RT44_RS07550 () | 1547111..1547545 | + | 435 | WP_001226136.1 | hypothetical protein | - |
| RT44_RS07555 () | 1547574..1547969 | + | 396 | WP_000449655.1 | hypothetical protein | - |
| RT44_RS07560 () | 1548059..1548205 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| RT44_RS07565 () | 1548202..1548816 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| RT44_RS14660 () | 1548942..1550148 | + | 1207 | Protein_1452 | site-specific integrase | - |
| RT44_RS07580 () | 1550191..1552233 | - | 2043 | WP_001813812.1 | hypothetical protein | - |
| RT44_RS07585 () | 1552220..1553152 | - | 933 | WP_014533165.1 | DUF1672 domain-containing protein | - |
| RT44_RS07590 () | 1553397..1555148 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| RT44_RS07595 () | 1555129..1555854 | - | 726 | WP_000064078.1 | two-component system response regulator SrrA | - |
| RT44_RS07600 () | 1555987..1556724 | - | 738 | WP_000159578.1 | rRNA pseudouridine synthase | - |
| RT44_RS07605 () | 1556717..1557259 | - | 543 | WP_000368656.1 | SMC-Scp complex subunit ScpB | - |
| RT44_RS07610 () | 1557252..1557983 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| RT44_RS07615 () | 1558075..1558581 | + | 507 | WP_001183437.1 | DUF309 domain-containing protein | - |
| RT44_RS07620 () | 1558659..1559546 | - | 888 | WP_000447732.1 | site-specific tyrosine recombinase XerD | - |
| RT44_RS07625 () | 1559595..1560044 | - | 450 | WP_000392691.1 | transcriptional repressor | - |
| RT44_RS07630 () | 1560149..1560691 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| RT44_RS07635 () | 1560773..1561681 | + | 909 | WP_001171352.1 | aldo/keto reductase | - |
| RT44_RS07640 () | 1561897..1562145 | - | 249 | WP_000995800.1 | hypothetical protein | - |
| RT44_RS07645 () | 1562161..1562916 | - | 756 | WP_000678232.1 | SDR family oxidoreductase | - |
| RT44_RS07650 () | 1563058..1563873 | + | 816 | WP_000779748.1 | pyrroline-5-carboxylate reductase | - |
| RT44_RS07655 () | 1563978..1564898 | - | 921 | WP_000454061.1 | ribonuclease Z | - |
| RT44_RS07660 () | 1565211..1566695 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| RT44_RS07665 () | 1566925..1567791 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
| RT44_RS07670 () | 1567873..1569522 | - | 1650 | WP_001041916.1 | alpha-glucosidase | - |
| RT44_RS07675 () | 1569538..1570557 | - | 1020 | WP_000256317.1 | LacI family DNA-binding transcriptional regulator | - |
| RT44_RS07680 () | 1570558..1570812 | - | 255 | WP_077477288.1 | hypothetical protein | - |
| RT44_RS07685 () | 1570751..1571122 | - | 372 | WP_000413428.1 | VOC family protein | - |
| RT44_RS07690 () | 1571341..1572747 | - | 1407 | WP_000193707.1 | NADP-dependent phosphogluconate dehydrogenase | - |
| RT44_RS07695 () | 1572815..1573948 | - | 1134 | WP_000606690.1 | tripeptidase T | - |
| RT44_RS07700 () | 1574211..1574390 | + | 180 | WP_001789875.1 | stressosome-associated protein Prli42 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|