NZ_CP0103721..151583

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 151583 bp
Accession: NZ_CP010372        Location: 1..151583         Organism: Escherichia coli strain 6409       Replicon: plasmid p6409-151.583kb


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
RR31_RS23580 () 1022..2299 + 1278 WP_001312878.1 L-lysine N6-monooxygenase VF
RR31_RS23585 () 2381..4582 + 2202 WP_000973519.1 Ferric aerobactin receptor VF
RR31_RS28445 () 5108..5794 + 687 Protein_3 IS1 family transposase IS1S Transposase
RR31_RS23605 () 6048..7070 - 1023 WP_000361402.1 helicase UvrD -
RR31_RS23610 () 7055..8620 - 1566 WP_001128474.1 AAA family ATPase -
RR31_RS23615 () 8695..9111 - 417 WP_001034044.1 type II toxin-antitoxin system VapC family toxin Toxin Detail
RR31_RS23620 () 9108..9338 - 231 WP_001261286.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Antitoxin Detail
RR31_RS23625 () 9898..10116 + 219 WP_000813630.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
RR31_RS23630 () 10118..10423 + 306 WP_001159871.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
RR31_RS23635 () 10424..11230 + 807 WP_000016970.1 site-specific integrase -
RR31_RS23640 () 11952..12707 + 756 WP_000852146.1 replication initiation protein RepE -
RR31_RS23645 () 13295..14461 + 1167 WP_000772446.1 Sporulation initiation inhibitor protein Soj VF
RR31_RS23650 () 14461..15432 + 972 WP_000817031.1 ParB/RepB/Spo0J family plasmid partition protein -
RR31_RS23655 () 16256..17158 + 903 WP_064766247.1 DUF1281 domain-containing protein -
RR31_RS28450 () 17162..17466 + 305 Protein_15 hypothetical protein -
RR31_RS23665 () 17543..18226 + 684 WP_040110341.1 DNA methylase -
RR31_RS23670 () 18227..18448 + 222 WP_001104873.1 hypothetical protein -
RR31_RS23675 () 18462..18896 + 435 WP_001546462.1 DUF1380 family protein -
RR31_RS23680 () 18941..19711 + 771 WP_001006251.1 hypothetical protein -
RR31_RS23685 () 20248..20550 + 303 WP_001666994.1 antirestriction protein -
RR31_RS23690 () 20597..21019 + 423 WP_000271685.1 DUF1380 family protein -
RR31_RS23695 () 21016..21207 + 192 WP_001027495.1 hypothetical protein -
RR31_RS29255 () 21479..21727 - 249 WP_071781657.1 hypothetical protein -
RR31_RS23710 () 22239..22469 + 231 WP_000218642.1 hypothetical protein -
RR31_RS23715 () 22521..23882 + 1362 WP_000199439.1 DUF3560 domain-containing protein -
RR31_RS23720 () 23930..24495 + 566 Protein_26 class I SAM-dependent methyltransferase -
RR31_RS23725 () 24521..24733 + 213 WP_001348622.1 hypothetical protein -
RR31_RS23730 () 25143..25349 + 207 WP_000275856.1 hypothetical protein -
RR31_RS23735 () 25375..25914 + 540 WP_000290840.1 single-stranded DNA-binding protein -
RR31_RS23740 () 25982..26215 + 234 WP_000005990.1 DUF905 family protein -
RR31_RS27550 () 26243..26440 + 198 Protein_31 hypothetical protein -
RR31_RS23745 () 26495..26929 + 435 WP_000845937.1 conjugation system SOS inhibitor PsiB -
RR31_RS23750 () 26926..27645 + 720 WP_001276238.1 plasmid SOS inhibition protein A -
RR31_RS29260 () 27657..27845 - 189 WP_001299721.1 hypothetical protein -
- () 27657..27881 + 225 NuclAT_0 - -
- () 27657..27881 + 225 NuclAT_0 - -
- () 27657..27881 + 225 NuclAT_0 - -
- () 27657..27881 + 225 NuclAT_0 - -
RR31_RS23760 () 27925..28083 + 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
RR31_RS23775 () 29004..29291 + 288 WP_000107535.1 hypothetical protein -
RR31_RS23780 () 29409..30230 + 822 WP_001234426.1 DUF945 domain-containing protein -
RR31_RS23785 () 30527..31129 - 603 WP_013362798.1 hypothetical protein VF
RR31_RS23790 () 31450..31833 + 384 WP_001151524.1 relaxosome protein TraM -
RR31_RS23795 () 32020..32709 + 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
RR31_RS23800 () 32808..33203 + 396 WP_001309237.1 conjugal transfer relaxosome protein TraY -
RR31_RS23805 () 33236..33601 + 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
RR31_RS23810 () 33616..33927 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
RR31_RS23815 () 33949..34515 + 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
RR31_RS23820 () 34526..35230 + 705 WP_072095570.1 type-F conjugative transfer system secretin TraK -
RR31_RS23825 () 35230..36657 + 1428 WP_040110342.1 conjugal transfer protein TraB -
RR31_RS23830 () 36647..37237 + 591 WP_000002787.1 conjugal transfer protein TraP -
RR31_RS23835 () 37191..37421 + 231 WP_001352845.1 conjugal transfer protein TrbD -
RR31_RS23840 () 37433..37684 + 252 WP_001038342.1 conjugal transfer protein TrbG -
RR31_RS23845 () 37681..38196 + 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
RR31_RS27565 () 38331..38552 + 222 WP_001278689.1 conjugal transfer protein TraR -
RR31_RS23855 () 38712..41339 + 2628 WP_001064245.1 type IV secretion system protein TraC -
RR31_RS23860 () 41336..41722 + 387 WP_000099686.1 type-F conjugative transfer system protein TrbI -
RR31_RS23865 () 41719..42351 + 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
RR31_RS23870 () 42348..43340 + 993 WP_000830180.1 conjugal transfer pilus assembly protein TraU -
RR31_RS23875 () 43349..43987 + 639 WP_021518374.1 type-F conjugative transfer system pilin assembly protein TrbC -
RR31_RS23880 () 43984..45792 + 1809 WP_000821840.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
RR31_RS23885 () 45819..46076 + 258 WP_000864312.1 conjugal transfer protein TrbE -
RR31_RS23890 () 46069..46812 + 744 WP_001030378.1 type-F conjugative transfer system pilin assembly protein TraF -
RR31_RS23895 () 46826..47167 + 342 WP_000556794.1 conjugal transfer protein TrbA -
RR31_RS23900 () 47148..47483 - 336 WP_000415571.1 hypothetical protein -
RR31_RS23905 () 47564..47848 + 285 WP_000624105.1 type-F conjugative transfer system pilin chaperone TraQ -
RR31_RS23910 () 47835..48389 + 555 WP_001553830.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
RR31_RS27570 () 48319..48693 + 375 WP_071788165.1 P-type conjugative transfer protein TrbJ -
RR31_RS23915 () 48647..49039 + 393 WP_000164675.1 F-type conjugal transfer protein TrbF -
RR31_RS23920 () 49026..50399 + 1374 WP_021518370.1 conjugal transfer protein TraH -
RR31_RS23925 () 50396..53221 + 2826 WP_001553826.1 conjugal transfer mating pair stabilization protein TraG -
RR31_RS23930 () 53218..53727 + 510 WP_000628100.1 conjugal transfer entry exclusion protein TraS -
RR31_RS23935 () 53741..54472 + 732 WP_000850424.1 complement resistance protein TraT -
RR31_RS23940 () 54724..56913 + 2190 WP_040110343.1 type IV conjugative transfer system coupling protein TraD -
RR31_RS23945 () 56913..62033 + 5121 WP_013362805.1 Multifunctional conjugation protein TraI Relaxase
RR31_RS23950 () 62053..62799 + 747 WP_023149624.1 conjugal transfer pilus acetylase TraX -
RR31_RS23955 () 62854..63414 + 561 WP_000139363.1 fertility inhibition protein FinO -
RR31_RS23960 () 63548..63760 + 213 WP_005012601.1 hypothetical protein -
RR31_RS29265 () 64061..64150 - 90 Protein_75 IS1 family transposase -
RR31_RS23970 () 64205..64882 + 678 WP_001339397.1 IS66 family transposase ISCro1 Transposase
RR31_RS23975 () 64882..65229 + 348 WP_000624622.1 IS66 family transposase ISCro1 Transposase
RR31_RS23980 () 65249..66820 + 1572 WP_023149734.1 IS66 family transposase ISCro1 Transposase
RR31_RS27585 () 66858..67474 - 617 Protein_79 IS1 family transposase IS1S Transposase
RR31_RS23995 () 67575..67757 + 183 WP_000968309.1 hypothetical protein -
- () 67896..67957 - 62 NuclAT_1 - Antitoxin Detail
- () 67896..67957 - 62 NuclAT_1 - Antitoxin Detail
- () 67896..67957 - 62 NuclAT_1 - Antitoxin Detail
- () 67896..67957 - 62 NuclAT_1 - Antitoxin Detail
RR31_RS24000 () 67944..68150 + 207 WP_015387399.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
RR31_RS24005 () 68434..68691 + 258 WP_000083833.1 replication regulatory protein RepA -
RR31_RS27600 () 68927..69001 + 75 WP_032336874.1 RepA leader peptide Tap -
RR31_RS24010 () 68994..69440 + 447 Protein_84 incFII family plasmid replication initiator RepA -
RR31_RS27605 () 69386..69868 - 483 Protein_85 VENN motif pre-toxin domain-containing protein -
RR31_RS24025 () 70761..71981 + 1221 WP_000410951.1 arginine deiminase -
RR31_RS24030 () 71992..72903 + 912 WP_000440183.1 carbamate kinase -
RR31_RS24035 () 72988..73992 + 1005 WP_000154545.1 Ornithine carbamoyltransferase VF
RR31_RS24040 () 74040..75443 + 1404 WP_000514417.1 YfcC family protein -
RR31_RS24045 () 75524..76003 + 480 WP_001496175.1 ArgR family transcriptional regulator -
RR31_RS27610 () 76067..76408 - 342 Protein_91 transposase -
RR31_RS29060 () 76360..76581 - 222 WP_000080227.1 IS66 family transposase ISEc43 Transposase
RR31_RS24065 () 76612..76962 - 351 WP_000624725.1 IS66 family transposase ISEc47 Transposase
RR31_RS24070 () 76959..77321 - 363 WP_059330006.1 IS66 family transposase ISEc23 Transposase
RR31_RS24075 () 77430..78127 - 698 Protein_95 IS1 family transposase IS1S Transposase
RR31_RS24080 () 78160..78738 + 579 WP_032152936.1 DUF2726 domain-containing protein -
RR31_RS24085 () 79151..79504 - 354 WP_000005489.1 hypothetical protein -
RR31_RS24090 () 79976..80998 - 1023 WP_000156883.1 IS110 family transposase ISSm1 Transposase
RR31_RS24095 () 81403..81660 + 258 WP_000083821.1 replication regulatory protein RepA -
RR31_RS24100 () 81895..81969 + 75 WP_001365705.1 RepA leader peptide Tap -
RR31_RS24105 () 81962..82819 + 858 WP_032152935.1 incFII family plasmid replication initiator RepA -
RR31_RS24110 () 82967..83671 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
RR31_RS24115 () 83922..84299 - 378 WP_000656305.1 GNAT family N-acetyltransferase -
RR31_RS24120 () 84366..87332 - 2967 WP_001138064.1 Tn3 family transposase TnpA_TnAs3 Transposase
RR31_RS27635 () 87335..87457 - 123 Protein_105 helix-turn-helix domain-containing protein -
RR31_RS24125 () 87510..88214 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
RR31_RS24130 () 88288..88947 - 660 WP_000412211.1 Chloramphenicol acetyltransferase ARG
RR31_RS24140 () 89226..89923 + 698 Protein_108 IS1 family transposase IS1R Transposase
RR31_RS27650 () 89920..90183 + 264 WP_049802299.1 antibiotic biosynthesis monooxygenase -
RR31_RS24145 () 90176..90562 + 387 WP_000460651.1 hypothetical protein -
RR31_RS24150 () 90570..91256 + 687 WP_001284954.1 winged helix-turn-helix domain-containing protein -
RR31_RS24155 () 91234..91857 - 624 WP_000088605.1 Tetracycline repressor protein class B from transposon Tn10 VF
RR31_RS24160 () 91939..93144 + 1206 WP_001089068.1 Tetracycline resistance protein, class B ARG
RR31_RS24165 () 93257..93850 - 594 WP_000428546.1 tetracyline resistance-associated transcriptional repressor TetC -
RR31_RS24170 () 93983..94354 + 372 WP_187440355.1 Transposon Tn10 TetD protein VF
RR31_RS24175 () 94364..95527 - 1164 Protein_116 IS4 family transposase IS10R Transposase
RR31_RS24180 () 95542..96239 - 698 Protein_117 IS1 family transposase IS1X2 Transposase
RR31_RS29330 () 96439..96552 + 114 Protein_118 IS6 family transposase -
RR31_RS24185 () 96702..96860 + 159 WP_000449408.1 DsbA family protein -
RR31_RS24190 () 96850..97356 + 507 WP_000949452.1 protein disulfide oxidoreductase -
RR31_RS24195 () 97539..98354 + 816 WP_012372823.1 Na(+)-translocating NADH-quinone reductase subunit C -
RR31_RS24200 () 98701..100587 + 1887 WP_000118029.1 FTR1 family iron permease -
RR31_RS24205 () 100628..101155 + 528 WP_000178050.1 iron transporter -
RR31_RS24210 () 101259..102638 + 1380 WP_000119836.1 DUF2318 domain-containing protein -
RR31_RS24215 () 102641..103924 + 1284 WP_000964653.1 ABC transporter permease -
RR31_RS24220 () 103914..105044 + 1131 WP_000729219.1 ABC transporter permease -
RR31_RS24225 () 105049..105744 + 696 WP_000117262.1 Lipoprotein-releasing system ATP-binding protein LolD VF
RR31_RS24230 () 105731..106216 + 486 WP_001267176.1 TlpA family protein disulfide reductase -
RR31_RS24235 () 106241..106726 + 486 WP_000874189.1 hypothetical protein -
RR31_RS24240 () 106848..107480 + 633 Protein_130 histidine-type phosphatase -
RR31_RS29070 () 107630..107740 - 111 Protein_131 IS5/IS1182 family transposase -
RR31_RS24245 () 107768..110182 - 2415 Protein_132 Tn3 family transposase TnpA_ISSba14 Transposase
RR31_RS24250 () 110240..110944 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
RR31_RS24255 () 110998..111453 - 456 Protein_134 Tn3 family transposase TnpR_TnAs3 Transposase
RR31_RS29270 () 111579..111929 - 351 WP_000454193.1 DUF3330 domain-containing protein -
RR31_RS24270 () 112132..113145 - 1014 WP_040110356.1 IS91 family transposase ISAzo26 Transposase
RR31_RS24275 () 113303..113776 + 474 WP_000703418.1 trimethoprim-resistant dihydrofolate reductase DfrA7 -
RR31_RS24280 () 114006..114353 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
RR31_RS24285 () 114347..115186 + 840 WP_000259031.1 Dihydropteroate synthase ARG
RR31_RS24290 () 115314..115814 + 501 WP_000376623.1 GNAT family N-acetyltransferase -
RR31_RS29275 () 116135..116203 + 69 Protein_141 EAL domain-containing protein -
RR31_RS24295 () 116321..117085 + 765 WP_001389365.1 IS6 family transposase IS6100 Transposase
RR31_RS24300 () 117225..117893 - 669 WP_001300294.1 putative signaling protein VF
RR31_RS24305 () 117929..118165 - 237 WP_000993386.1 broad-spectrum mercury transporter MerE -
RR31_RS24310 () 118162..118524 - 363 WP_001277456.1 mercury resistance co-regulator MerD -
RR31_RS24315 () 118542..120236 - 1695 WP_000105636.1 mercury(II) reductase -
RR31_RS24320 () 120288..120710 - 423 WP_001340589.1 organomercurial transporter MerC -
RR31_RS24325 () 120746..121021 - 276 WP_000732292.1 mercury resistance system periplasmic binding protein MerP -
RR31_RS24330 () 121035..121385 - 351 WP_001294663.1 mercuric transport protein MerT -
RR31_RS24335 () 121457..121891 + 435 WP_000429836.1 IS607 family transposase ISChh1 Transposase
RR31_RS24340 () 121998..122695 - 698 Protein_151 IS1 family transposase IS1R Transposase
RR31_RS24345 () 122724..123464 - 741 Protein_152 DUF262 domain-containing protein -
RR31_RS24350 () 123614..124474 - 861 WP_000027057.1 Beta-lactamase TEM ARG
RR31_RS24355 () 124657..125073 - 417 Protein_154 Tn3 family transposase TnpR_Tn3 Transposase
RR31_RS24360 () 125128..125832 - 705 WP_001067855.1 IS6 family transposase IS26 Transposase
RR31_RS24370 () 125883..126828 + 946 Protein_156 IS66 family transposase ISEc8 Transposase
RR31_RS24375 () 126914..127936 + 1023 WP_000255956.1 IS21 family transposase IS100kyp Transposase
RR31_RS24380 () 127933..128715 + 783 WP_001317493.1 IS21 family transposase IS100kyp Transposase
RR31_RS24385 () 128783..129391 + 609 Protein_159 IS66 family transposase ISEc22 Transposase
RR31_RS24390 () 129454..130245 - 792 WP_000977394.1 DUF4198 domain-containing protein -
RR31_RS24395 () 130252..132222 - 1971 WP_001496335.1 Hemin receptor VF
RR31_RS24400 () 132504..132940 + 437 Protein_162 IS3 family transposase IS2 Transposase
RR31_RS27720 () 133465..133737 + 273 WP_001322642.1 adhesin biosynthesis transcription regulatory family protein -
RR31_RS29075 () 134183..134358 + 176 Protein_164 IS3 family transposase -
RR31_RS24410 () 134584..135753 - 1170 WP_001072358.1 hypothetical protein -
RR31_RS24415 () 136120..136308 + 189 WP_001309252.1 hypothetical protein -
RR31_RS24420 () 136429..137169 + 741 WP_001066953.1 tyrosine-type recombinase/integrase -
RR31_RS24425 () 137454..138431 - 978 WP_000361611.1 RepB family plasmid replication initiator protein -
RR31_RS24440 () 139177..139500 + 324 Protein_169 IS21 family transposase IS21 Transposase
RR31_RS29080 () 139502..139606 + 105 Protein_170 AAA family ATPase -
RR31_RS24445 () 139667..140180 + 514 Protein_171 DUF4113 domain-containing protein -
RR31_RS24450 () 140360..141057 - 698 Protein_172 IS1 family transposase IS1G Transposase
RR31_RS24455 () 141413..142327 + 915 WP_000949005.1 Putative metal ABC transporter substrate-binding protein Hpf VF
RR31_RS24460 () 142327..143154 + 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
RR31_RS24465 () 143151..144008 + 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
RR31_RS24470 () 144005..144862 + 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
RR31_RS28495 () 145096..145353 - 258 Protein_177 Tn3 family transposase -
RR31_RS24475 () 145351..145764 + 414 Protein_178 phosphopyruvate hydratase -
RR31_RS24485 () 146105..146485 + 381 WP_001318207.1 fluoride efflux transporter CrcB -
RR31_RS24490 () 146865..148058 - 1194 WP_000095526.1 MFS transporter -
RR31_RS24495 () 148194..149918 + 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
RR31_RS24500 () 149919..150866 + 948 WP_000011908.1 N(6)-hydroxylysine O-acetyltransferase VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance