MGE detailed information
MGE type: Prophage MGE length: 121878 bp
Accession: NZ_CP010304 Location: 2014952..2136829 Organism: Escherichia coli O157:H7 str. SS52 Replicon: chromosome
Accession: NZ_CP010304 Location: 2014952..2136829 Organism: Escherichia coli O157:H7 str. SS52 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SS52_RS10135 () | 2010557..2011975 | - | 1419 | WP_000558061.1 | GGDEF domain-containing protein | - |
| SS52_RS10140 () | 2012114..2012473 | - | 360 | WP_001191021.1 | DUF4186 domain-containing protein | - |
| SS52_RS10145 () | 2012473..2013399 | - | 927 | WP_000257409.1 | glutaminase B | - |
| SS52_RS10150 () | 2013463..2014851 | - | 1389 | WP_000156618.1 | succinate-semialdehyde dehydrogenase | - |
| SS52_RS10155 () | 2014952..2015833 | + | 882 | WP_000366470.1 | hypothetical protein | VF |
| SS52_RS10160 () | 2015911..2016699 | + | 789 | WP_000258595.1 | putative protein YneK | - |
| SS52_RS32730 () | 2016706..2017026 | + | 321 | WP_094364431.1 | putative protein YneK | - |
| SS52_RS10170 () | 2017177..2018367 | + | 1191 | WP_000210797.1 | L-arabinose MFS transporter | - |
| SS52_RS10175 () | 2018392..2019057 | - | 666 | WP_000885016.1 | NAAT family transporter MarC | - |
| SS52_RS10180 () | 2019269..2019703 | + | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| SS52_RS10185 () | 2019723..2020106 | + | 384 | WP_000091199.1 | hypothetical protein | VF |
| SS52_RS10190 () | 2020138..2020356 | + | 219 | WP_000803524.1 | multiple antibiotic resistance protein MarB | - |
| SS52_RS10195 () | 2020387..2021286 | - | 900 | WP_000087233.1 | O-acetylserine/cysteine exporter | - |
| SS52_RS10200 () | 2021481..2022668 | + | 1188 | WP_001054199.1 | efflux MFS transporter YdeE | - |
| SS52_RS10205 () | 2022709..2023104 | - | 396 | WP_001271101.1 | rhodanese | - |
| SS52_RS10210 () | 2023199..2024170 | + | 972 | WP_001310251.1 | transcriptional regulator FtrA | - |
| SS52_RS10215 () | 2024278..2024373 | + | 96 | WP_000901365.1 | protein MgtS | - |
| SS52_RS10220 () | 2024592..2025482 | - | 891 | WP_000592852.1 | diguanylate cyclase DgcZ | - |
| SS52_RS10225 () | 2025737..2026129 | - | 393 | WP_000671724.1 | YdeI family stress tolerance OB fold protein | - |
| SS52_RS10230 () | 2026405..2026923 | + | 519 | WP_001024796.1 | 2-oxo-tetronate isomerase | - |
| SS52_RS10235 () | 2026968..2029013 | - | 2046 | WP_001302117.1 | peptidyl-dipeptidase Dcp | - |
| SS52_RS10240 () | 2029150..2029896 | + | 747 | WP_000636568.1 | hypothetical protein | VF |
| SS52_RS10245 () | 2029985..2030671 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| SS52_RS10250 () | 2030848..2031051 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| SS52_RS10255 () | 2031087..2032547 | - | 1461 | WP_000527769.1 | mannitol dehydrogenase family protein | - |
| SS52_RS10260 () | 2032636..2033919 | - | 1284 | Protein_1944 | MHS family MFS transporter YdfJ | - |
| SS52_RS10265 () | 2034051..2034293 | + | 243 | WP_001120551.1 | DinI-like family protein | - |
| SS52_RS10270 () | 2034455..2035096 | - | 642 | WP_001143804.1 | hypothetical protein | VF |
| SS52_RS31785 () | 2035178..2035807 | - | 630 | WP_001303500.1 | hypothetical protein | VF |
| SS52_RS10280 () | 2035880..2036455 | - | 576 | WP_001131658.1 | hypothetical protein | VF |
| SS52_RS10285 () | 2036570..2036839 | - | 270 | WP_001023407.1 | phage tail fiber C-terminal domain-containing protein | - |
| SS52_RS10290 () | 2036841..2038154 | - | 1314 | WP_039102510.1 | ISNCY family transposase KIS | Transposase |
| SS52_RS10295 () | 2038219..2038818 | - | 600 | WP_001230508.1 | hypothetical protein | VF |
| SS52_RS10300 () | 2038886..2041453 | - | 2568 | Protein_1952 | host specificity protein J | - |
| SS52_RS10305 () | 2041453..2042964 | - | 1512 | Protein_1953 | host specificity protein J | - |
| SS52_RS10310 () | 2043306..2043938 | - | 633 | WP_050439450.1 | tail assembly protein | - |
| SS52_RS10315 () | 2043884..2044627 | - | 744 | WP_000194720.1 | C40 family peptidase | - |
| SS52_RS10320 () | 2044638..2045336 | - | 699 | WP_001179510.1 | phage minor tail protein L | - |
| SS52_RS10325 () | 2045336..2045677 | - | 342 | WP_000807954.1 | phage tail protein | - |
| SS52_RS10330 () | 2045670..2048912 | - | 3243 | WP_039102512.1 | phage tail tape measure protein | - |
| SS52_RS10335 () | 2048964..2049173 | - | 210 | WP_001453698.1 | DUF4035 domain-containing protein | - |
| SS52_RS10340 () | 2049269..2049643 | - | 375 | WP_001030063.1 | phage tail assembly chaperone | - |
| SS52_RS10345 () | 2049649..2050365 | - | 717 | WP_001275508.1 | tail protein | - |
| SS52_RS10350 () | 2050424..2050768 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| SS52_RS10355 () | 2050765..2051211 | - | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| SS52_RS10360 () | 2051208..2051558 | - | 351 | WP_001007901.1 | phage head closure protein | - |
| SS52_RS10365 () | 2051568..2051894 | - | 327 | WP_000126026.1 | head-tail connector protein | - |
| SS52_RS10375 () | 2051891..2053988 | - | 2098 | Protein_1966 | phage portal protein | - |
| SS52_RS10380 () | 2053934..2054155 | - | 222 | WP_032257997.1 | hypothetical protein | - |
| SS52_RS10385 () | 2054200..2054796 | - | 597 | Protein_1968 | phage major capsid protein | - |
| SS52_RS29980 () | 2054699..2055106 | - | 408 | WP_000731239.1 | YdfR family protein | - |
| SS52_RS10390 () | 2055111..2055326 | - | 216 | WP_024180155.1 | class II holin family protein | - |
| SS52_RS10400 () | 2055765..2057615 | - | 1851 | WP_000023184.1 | SASA family carbohydrate esterase | - |
| SS52_RS10405 () | 2057841..2058096 | - | 256 | Protein_1972 | DUF3927 family protein | - |
| SS52_RS10410 () | 2058093..2058524 | - | 432 | WP_001477269.1 | tellurite resistance TerB family protein | - |
| SS52_RS10425 () | 2058975..2059688 | - | 714 | WP_000301797.1 | helix-turn-helix domain-containing protein | - |
| SS52_RS32740 () | 2059824..2060021 | - | 198 | WP_000917763.1 | hypothetical protein | - |
| SS52_RS10435 () | 2060246..2060800 | - | 555 | WP_000640035.1 | DUF1133 family protein | - |
| SS52_RS10440 () | 2060863..2061168 | - | 306 | WP_001217444.1 | RusA family crossover junction endodeoxyribonuclease | - |
| SS52_RS10445 () | 2061181..2062230 | - | 1050 | WP_001265229.1 | DUF968 domain-containing protein | - |
| SS52_RS10450 () | 2062232..2062504 | - | 273 | WP_000191872.1 | hypothetical protein | - |
| SS52_RS10455 () | 2062626..2062970 | - | 345 | WP_000756596.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| SS52_RS10460 () | 2063090..2063245 | - | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| SS52_RS10465 () | 2063536..2064093 | - | 558 | WP_000104474.1 | DUF551 domain-containing protein | - |
| SS52_RS10470 () | 2064095..2064313 | - | 219 | WP_000683609.1 | DUF4014 family protein | - |
| SS52_RS10475 () | 2064441..2064752 | - | 312 | WP_001289673.1 | hypothetical protein | - |
| SS52_RS10480 () | 2064745..2064972 | - | 228 | WP_000699809.1 | hypothetical protein | - |
| SS52_RS10485 () | 2064969..2065250 | - | 282 | WP_000603384.1 | DNA-binding protein | - |
| SS52_RS10490 () | 2065283..2065999 | - | 717 | WP_000450627.1 | DUF1627 domain-containing protein | - |
| SS52_RS32745 () | 2066033..2066494 | - | 462 | WP_000139447.1 | replication protein | - |
| SS52_RS32750 () | 2066487..2067530 | - | 1044 | WP_001262402.1 | hypothetical protein | - |
| SS52_RS10505 () | 2067599..2068024 | - | 426 | WP_000693878.1 | Rha family transcriptional regulator | - |
| SS52_RS10510 () | 2068008..2068250 | - | 243 | WP_000747948.1 | hypothetical protein | - |
| SS52_RS32755 () | 2068642..2068980 | + | 339 | WP_001416688.1 | peptidase S24 | - |
| SS52_RS10520 () | 2069273..2069425 | + | 153 | WP_000380316.1 | DUF1391 family protein | - |
| SS52_RS10525 () | 2069437..2070075 | + | 639 | WP_000394548.1 | hypothetical protein | - |
| SS52_RS10530 () | 2070076..2070285 | - | 210 | WP_001133037.1 | hypothetical protein | - |
| SS52_RS10540 () | 2070850..2071038 | + | 189 | WP_000449175.1 | cell division inhibitor | - |
| SS52_RS10545 () | 2071035..2071223 | + | 189 | WP_000199475.1 | DUF1482 family protein | - |
| SS52_RS10550 () | 2071316..2072554 | + | 1239 | Protein_1998 | exonuclease | - |
| SS52_RS10555 () | 2072542..2073093 | + | 552 | Protein_1999 | hypothetical protein ; Integrase | Integrase |
| SS52_RS29990 () | 2073271..2073513 | + | 243 | WP_001120551.1 | DinI-like family protein | - |
| SS52_RS10560 () | 2073566..2074381 | - | 816 | Protein_2001 | IS256 family transposase IS1414 | Transposase |
| SS52_RS10565 () | 2074476..2074856 | + | 381 | WP_001171540.1 | IS66 family transposase ISEc8 | Transposase |
| SS52_RS10570 () | 2074853..2075200 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| SS52_RS10575 () | 2075250..2076788 | + | 1539 | WP_000998048.1 | IS66 family transposase ISEc8 | Transposase |
| SS52_RS10580 () | 2076826..2077221 | - | 396 | Protein_2005 | IS256 family transposase ISEic2 | Transposase |
| SS52_RS32760 () | 2077371..2078021 | - | 651 | WP_001121225.1 | hypothetical protein | VF |
| SS52_RS10595 () | 2078732..2079307 | - | 576 | WP_001131642.1 | hypothetical protein | VF |
| SS52_RS10600 () | 2079421..2079690 | - | 270 | WP_001023362.1 | phage tail fiber C-terminal domain-containing protein | - |
| SS52_RS10605 () | 2079692..2080915 | - | 1224 | WP_039102524.1 | prophage tail fiber N-terminal domain-containing protein | - |
| SS52_RS10610 () | 2080980..2081579 | - | 600 | WP_001230508.1 | hypothetical protein | VF |
| SS52_RS10620 () | 2081647..2085125 | - | 3479 | Protein_2011 | host specificity protein J | - |
| SS52_RS10625 () | 2085313..2085750 | - | 438 | WP_001179509.1 | phage minor tail protein L | - |
| SS52_RS10630 () | 2085750..2086091 | - | 342 | WP_000807954.1 | phage tail protein | - |
| SS52_RS10635 () | 2086084..2089326 | - | 3243 | WP_039102527.1 | phage tail tape measure protein | - |
| SS52_RS10640 () | 2089374..2089583 | - | 210 | WP_001453746.1 | DUF4035 domain-containing protein | - |
| SS52_RS10645 () | 2089679..2090053 | - | 375 | WP_000710952.1 | phage tail assembly chaperone | - |
| SS52_RS10650 () | 2090068..2090784 | - | 717 | WP_001275434.1 | immunoglobulin domain-containing protein | - |
| SS52_RS10655 () | 2090850..2091194 | - | 345 | WP_000133388.1 | DUF3168 domain-containing protein | - |
| SS52_RS10660 () | 2091191..2091637 | - | 447 | WP_000573374.1 | HK97 gp10 family phage protein | - |
| SS52_RS10665 () | 2091634..2091984 | - | 351 | WP_001007905.1 | phage head closure protein | - |
| SS52_RS10670 () | 2091994..2092320 | - | 327 | WP_000125988.1 | head-tail connector protein | - |
| SS52_RS10675 () | 2092323..2094902 | - | 2580 | WP_000267295.1 | phage portal protein | - |
| SS52_RS10680 () | 2094848..2095069 | - | 222 | WP_001063099.1 | hypothetical protein | - |
| SS52_RS10685 () | 2095114..2097051 | - | 1938 | WP_000173030.1 | phage major capsid protein | - |
| SS52_RS10695 () | 2097115..2098775 | - | 1661 | Protein_2025 | terminase large subunit | - |
| SS52_RS10700 () | 2098772..2099335 | - | 564 | WP_000958416.1 | terminase small subunit | - |
| SS52_RS10710 () | 2099627..2099992 | - | 366 | WP_000279796.1 | HNH endonuclease | - |
| SS52_RS10715 () | 2100034..2100261 | + | 228 | WP_000095736.1 | DUF3950 domain-containing protein | - |
| SS52_RS32770 () | 2100686..2100871 | - | 186 | WP_012816791.1 | Rz1 family lipoprotein | - |
| SS52_RS32780 () | 2101099..2101245 | - | 147 | WP_000539792.1 | hypothetical protein | - |
| SS52_RS10730 () | 2101245..2101814 | - | 570 | WP_001056806.1 | hypothetical protein | - |
| SS52_RS10735 () | 2102085..2102618 | - | 534 | WP_000992137.1 | lysozyme | - |
| SS52_RS10740 () | 2102669..2103013 | - | 345 | WP_000731241.1 | YdfR family protein | - |
| SS52_RS10745 () | 2103018..2103233 | - | 216 | WP_024180155.1 | class II holin family protein | - |
| SS52_RS10755 () | 2103673..2105523 | - | 1851 | WP_039102530.1 | SASA family carbohydrate esterase | - |
| SS52_RS10765 () | 2105750..2106005 | - | 256 | Protein_2036 | DUF3927 family protein | - |
| SS52_RS10770 () | 2106002..2106430 | - | 429 | WP_001303509.1 | tellurite resistance protein | - |
| SS52_RS10790 () | 2107068..2107757 | - | 690 | WP_001059381.1 | antiterminator | - |
| SS52_RS10795 () | 2107754..2108113 | - | 360 | WP_001217455.1 | RusA family crossover junction endodeoxyribonuclease | - |
| SS52_RS10800 () | 2108126..2109175 | - | 1050 | WP_001265161.1 | DUF968 domain-containing protein | - |
| SS52_RS31830 () | 2109177..2109455 | - | 279 | WP_077787473.1 | hypothetical protein | - |
| SS52_RS10810 () | 2109623..2109778 | - | 156 | WP_001303917.1 | type I toxin-antitoxin system toxin HokD | - |
| SS52_RS31835 () | 2110024..2110128 | - | 105 | WP_001278450.1 | hypothetical protein | - |
| SS52_RS10815 () | 2110244..2110828 | - | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| SS52_RS10820 () | 2110885..2111280 | - | 396 | WP_001118159.1 | DUF977 family protein | - |
| SS52_RS10825 () | 2111296..2112065 | - | 770 | Protein_2046 | DUF1627 domain-containing protein | - |
| SS52_RS10835 () | 2112091..2112831 | - | 741 | WP_000788938.1 | ATP-binding protein | - |
| SS52_RS10840 () | 2112838..2113800 | - | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| SS52_RS10845 () | 2113823..2114248 | - | 426 | WP_000693943.1 | Rha family transcriptional regulator | - |
| SS52_RS10850 () | 2114245..2114547 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| SS52_RS31840 () | 2114645..2115016 | + | 372 | WP_001169686.1 | hypothetical protein | - |
| SS52_RS10860 () | 2115037..2115228 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| SS52_RS10865 () | 2115230..2115508 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SS52_RS10875 () | 2115861..2116160 | + | 300 | WP_001240334.1 | hypothetical protein | - |
| SS52_RS10880 () | 2116232..2116450 | + | 219 | WP_001171930.1 | hypothetical protein | - |
| SS52_RS30020 () | 2117019..2117207 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| SS52_RS10885 () | 2117204..2117395 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| SS52_RS10890 () | 2117488..2118573 | + | 1086 | Protein_2058 | exonuclease | - |
| SS52_RS10900 () | 2118624..2119837 | + | 1214 | WP_162829202.1 | IS3 family transposase IS1203 | Transposase |
| SS52_RS10905 () | 2119878..2121272 | + | 1395 | Protein_2060 | 3'-5' exoribonuclease | - |
| SS52_RS10910 () | 2121345..2121596 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| SS52_RS32785 () | 2121631..2121815 | + | 185 | Protein_2062 | DUF3596 domain-containing protein | - |
| SS52_RS10920 () | 2122585..2122911 | - | 327 | WP_001302046.1 | YnfA family protein | - |
| SS52_RS10925 () | 2123046..2123387 | + | 342 | WP_000705189.1 | DUF1283 family protein | - |
| SS52_RS10930 () | 2123422..2123982 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| SS52_RS10935 () | 2123985..2124695 | - | 711 | WP_001303515.1 | YnfC family lipoprotein | - |
| SS52_RS10940 () | 2124803..2125108 | + | 306 | WP_000778147.1 | DUF1161 domain-containing protein | - |
| SS52_RS10945 () | 2125307..2127733 | + | 2427 | WP_000041704.1 | dimethyl sulfoxide reductase subunit A | - |
| SS52_RS10950 () | 2127794..2130217 | + | 2424 | WP_001414236.1 | dimethyl sulfoxide reductase subunit A | - |
| SS52_RS10955 () | 2130228..2130845 | + | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| SS52_RS10960 () | 2130847..2131701 | + | 855 | WP_000526515.1 | dimethyl sulfoxide reductase anchor subunit | - |
| SS52_RS10965 () | 2131744..2132358 | + | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| SS52_RS10970 () | 2132516..2133808 | + | 1293 | WP_071525082.1 | voltage-gated ClC-type chloride channel ClcB | - |
| SS52_RS10975 () | 2133761..2134456 | - | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| SS52_RS10980 () | 2134581..2135801 | - | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| SS52_RS10985 () | 2135936..2136829 | - | 894 | WP_001019530.1 | hypothetical protein | VF |
| SS52_RS10990 () | 2136936..2138189 | + | 1254 | WP_000091829.1 | MFS transporter | - |
| SS52_RS33510 () | 2138238..2138357 | - | 120 | WP_001299090.1 | hypothetical protein | - |
| SS52_RS10995 () | 2138613..2138921 | + | 309 | WP_001414237.1 | acid resistance repetitive basic protein Asr | - |
| SS52_RS11000 () | 2139014..2139097 | + | 84 | WP_000233090.1 | hypothetical protein | - |
| SS52_RS11005 () | 2139197..2140018 | + | 822 | WP_001260835.1 | serine protease | - |
| SS52_RS11010 () | 2140057..2140386 | - | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| SS52_RS11015 () | 2140373..2140738 | - | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|