MGE detailed information
MGE type: Prophage MGE length: 40173 bp
Accession: NZ_CP010300 Location: 1922215..1962387 Organism: Staphylococcus aureus strain ATCC BAA1680 Replicon: chromosome
Accession: NZ_CP010300 Location: 1922215..1962387 Organism: Staphylococcus aureus strain ATCC BAA1680 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RM28_RS08795 () | 1918028..1918774 | - | 747 | WP_002868962.1 | S9 family peptidase | - |
| RM28_RS08800 () | 1918779..1919252 | - | 474 | WP_000672014.1 | nucleoside triphosphatase YtkD | - |
| RM28_RS08805 () | 1919318..1919575 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| RM28_RS08810 () | 1919572..1920573 | - | 1002 | WP_000778523.1 | o-succinylbenzoate synthase | - |
| RM28_RS08815 () | 1920578..1922056 | - | 1479 | WP_000348360.1 | o-succinylbenzoate--CoA ligase | - |
| RM28_RS08820 () | 1922215..1922670 | - | 456 | WP_011443643.1 | DUF4909 domain-containing protein | - |
| RM28_RS08825 () | 1922973..1923623 | + | 651 | WP_001795535.1 | excalibur calcium-binding domain-containing protein | - |
| RM28_RS08830 () | 1923704..1924387 | + | 684 | WP_173401751.1 | DUF4352 domain-containing protein | - |
| RM28_RS15550 () | 1924362..1924700 | + | 339 | WP_173401752.1 | hypothetical protein | - |
| RM28_RS08835 () | 1924776..1925402 | + | 627 | Protein_1841 | hypothetical protein | - |
| RM28_RS08840 () | 1925443..1925787 | + | 345 | WP_000627551.1 | DUF3969 family protein | - |
| RM28_RS08845 () | 1925885..1926436 | + | 552 | WP_000414205.1 | hypothetical protein | - |
| RM28_RS08850 () | 1926654..1927295 | - | 642 | WP_000494956.1 | ImmA/IrrE family metallo-endopeptidase | - |
| RM28_RS08855 () | 1927409..1927594 | - | 186 | WP_000809857.1 | hypothetical protein | - |
| RM28_RS14540 () | 1927596..1927772 | - | 177 | WP_000375476.1 | hypothetical protein | - |
| RM28_RS08865 () | 1927783..1928166 | - | 384 | WP_000070811.1 | hypothetical protein | - |
| RM28_RS14550 () | 1928770..1928913 | - | 144 | WP_001549059.1 | IS3 family transposase IS655 | Transposase |
| RM28_RS15405 () | 1929116..1929211 | + | 96 | WP_144245636.1 | type I toxin-antitoxin system Fst family toxin | Toxin Detail |
| - () | 1929239..1929298 | - | 60 | - | - | Antitoxin Detail |
| RM28_RS14555 () | 1929334..1929435 | + | 102 | WP_001791893.1 | hypothetical protein | - |
| RM28_RS14560 () | 1929413..1929589 | - | 177 | Protein_1851 | transposase | - |
| RM28_RS08875 () | 1929783..1930160 | - | 378 | WP_001037045.1 | DUF1433 domain-containing protein | - |
| RM28_RS08880 () | 1930681..1934793 | - | 4113 | WP_000831218.1 | ATP-binding protein | - |
| RM28_RS08885 () | 1935643..1936842 | - | 1200 | WP_000072576.1 | restriction endonuclease subunit S | - |
| RM28_RS08890 () | 1936835..1938391 | - | 1557 | WP_000028659.1 | type I restriction-modification system subunit M | - |
| RM28_RS14565 () | 1938555..1938689 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| RM28_RS08895 () | 1938754..1939473 | - | 720 | WP_001038688.1 | hypothetical protein | VF |
| RM28_RS08900 () | 1939624..1940340 | - | 717 | WP_001038759.1 | hypothetical protein | VF |
| RM28_RS15410 () | 1940442..1940549 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| RM28_RS08905 () | 1940498..1941217 | - | 720 | WP_001038704.1 | hypothetical protein | VF |
| RM28_RS08910 () | 1941338..1942057 | - | 720 | WP_001038867.1 | hypothetical protein | VF |
| RM28_RS08915 () | 1942115..1942837 | - | 723 | WP_001039447.1 | hypothetical protein | VF |
| RM28_RS08920 () | 1942962..1943669 | - | 708 | WP_001039435.1 | hypothetical protein | VF |
| RM28_RS08925 () | 1944633..1945199 | + | 567 | WP_001092763.1 | DUF4888 domain-containing protein | - |
| RM28_RS14575 () | 1945673..1946371 | - | 699 | WP_000586140.1 | hypothetical protein | - |
| RM28_RS08935 () | 1946368..1947129 | - | 762 | WP_000581552.1 | lantibiotic immunity ABC transporter MutE/EpiE family permease subunit | - |
| RM28_RS08940 () | 1947126..1947818 | - | 693 | WP_001096791.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| RM28_RS08945 () | 1947841..1949214 | - | 1374 | WP_000691541.1 | S8 family serine peptidase | - |
| RM28_RS08950 () | 1949224..1949742 | - | 519 | WP_000504439.1 | flavoprotein | - |
| RM28_RS08955 () | 1949758..1951002 | - | 1245 | WP_000566596.1 | lanthionine synthetase C family protein | - |
| RM28_RS08960 () | 1950995..1953988 | - | 2994 | WP_001092605.1 | lantibiotic dehydratase | - |
| RM28_RS08965 () | 1954053..1954196 | - | 144 | WP_000416756.1 | gallidermin/nisin family lantibiotic | - |
| RM28_RS08970 () | 1954933..1955076 | - | 144 | WP_000416759.1 | gallidermin/nisin family lantibiotic | - |
| RM28_RS08975 () | 1955318..1956301 | - | 984 | WP_000782464.1 | hypothetical protein | VF |
| RM28_RS08980 () | 1956303..1957238 | - | 936 | WP_000473596.1 | hypothetical protein | VF |
| RM28_RS08985 () | 1958037..1958576 | + | 540 | WP_000226886.1 | hypothetical protein | - |
| RM28_RS08990 () | 1958589..1959376 | + | 788 | Protein_1877 | DUF1828 domain-containing protein | - |
| RM28_RS15555 () | 1959837..1960045 | + | 209 | Protein_1878 | hypothetical protein | - |
| RM28_RS09035 () | 1961833..1962387 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| RM28_RS09040 () | 1962710..1964110 | - | 1401 | WP_000167538.1 | protoporphyrinogen oxidase | - |
| RM28_RS09045 () | 1964134..1965057 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| RM28_RS09050 () | 1965115..1966152 | - | 1038 | WP_000233526.1 | uroporphyrinogen decarboxylase | - |
| RM28_RS14595 () | 1966142..1966252 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| RM28_RS09055 () | 1966415..1966918 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus str. Newman | Prophage | TA10024 | NC_009641 | 1882747..1922929 | 0 |