MGE detailed information
MGE type: Conjugative plasmid MGE length: 136060 bp
Accession: NZ_CP010233 Location: 1..136060 Organism: Escherichia coli strain S30 Replicon: plasmid B
Accession: NZ_CP010233 Location: 1..136060 Organism: Escherichia coli strain S30 Replicon: plasmid B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG68_RS25650 () | 1..1035 | - | 1035 | Protein_1 | Tn3 family transposase | - |
| RG68_RS25655 () | 1024..1431 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| RG68_RS25660 () | 1569..2453 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| RG68_RS25665 () | 2485..3684 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| RG68_RS25670 () | 3790..4416 | + | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| RG68_RS25675 () | 4448..4690 | - | 243 | WP_000844627.1 | transposase | - |
| RG68_RS25690 () | 5077..5913 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| RG68_RS25695 () | 5913..6716 | - | 804 | WP_001082320.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| RG68_RS25700 () | 6777..7592 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| RG68_RS25710 () | 7922..8098 | + | 177 | WP_000954592.1 | Arm DNA-binding domain-containing protein | - |
| RG68_RS25715 () | 8280..9035 | - | 756 | Protein_11 | IS110 family transposase IS5075 | Transposase |
| RG68_RS25720 () | 9088..9792 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| RG68_RS25730 () | 10178..10594 | + | 417 | WP_014839980.1 | Glutathione transferase FosA | ARG |
| RG68_RS25735 () | 10599..11117 | - | 519 | WP_014839979.1 | hypothetical protein | - |
| RG68_RS25740 () | 11117..11905 | - | 789 | WP_014839978.1 | winged helix-turn-helix domain-containing protein | - |
| RG68_RS25745 () | 11925..12395 | - | 471 | WP_049824851.1 | TetR family transcriptional regulator | - |
| RG68_RS25755 () | 12405..13109 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| RG68_RS25765 () | 13145..14011 | + | 867 | WP_073546711.1 | hypothetical protein | - |
| RG68_RS25770 () | 14309..15397 | + | 1089 | WP_000952231.1 | hypothetical protein | - |
| RG68_RS25775 () | 15399..16268 | + | 870 | WP_000253407.1 | hypothetical protein | - |
| RG68_RS25780 () | 16325..17890 | - | 1566 | WP_000741348.1 | ATP-binding protein | - |
| RG68_RS25785 () | 18198..18428 | + | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| RG68_RS25790 () | 18425..18841 | + | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| RG68_RS25795 () | 19003..21141 | - | 2139 | WP_000350635.1 | AAA family ATPase | - |
| RG68_RS25800 () | 21495..21752 | + | 258 | WP_000343085.1 | hypothetical protein | - |
| RG68_RS25805 () | 21752..22342 | + | 591 | WP_000194575.1 | hypothetical protein | - |
| RG68_RS25810 () | 22605..24161 | + | 1557 | WP_024126035.1 | AAA family ATPase | - |
| RG68_RS25815 () | 24352..24969 | + | 618 | WP_000521603.1 | hypothetical protein | - |
| RG68_RS25820 () | 25262..26299 | - | 1038 | WP_044502555.1 | permease | - |
| RG68_RS25825 () | 26404..26727 | + | 324 | WP_001175594.1 | helix-turn-helix domain-containing protein | - |
| RG68_RS25830 () | 26828..27538 | + | 711 | WP_024159726.1 | arsenical resistance protein ArsH | - |
| RG68_RS25835 () | 27547..28092 | + | 546 | WP_001286342.1 | sigma-70 family RNA polymerase sigma factor | - |
| RG68_RS25840 () | 28168..28530 | + | 363 | WP_011117603.1 | arsenic metallochaperone ArsD family protein | - |
| RG68_RS25845 () | 28557..30308 | + | 1752 | WP_023171140.1 | Arsenical pump-driving ATPase | VF |
| RG68_RS25850 () | 30382..30750 | - | 369 | WP_011117601.1 | winged helix-turn-helix domain-containing protein | - |
| RG68_RS25855 () | 30813..31625 | - | 813 | WP_011117600.1 | sulfite exporter TauE/SafE family protein | - |
| RG68_RS25860 () | 31837..32373 | + | 537 | WP_011117599.1 | L-amino acid N-acyltransferase MnaT | VF |
| RG68_RS25865 () | 32408..32833 | - | 426 | WP_011117598.1 | glutaredoxin-dependent arsenate reductase | - |
| RG68_RS25870 () | 32846..33439 | - | 594 | Protein_39 | arsenite efflux transporter membrane subunit ArsB | - |
| RG68_RS25875 () | 33473..35992 | - | 2520 | Protein_40 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| RG68_RS25885 () | 36047..36751 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| RG68_RS25895 () | 36815..36955 | - | 141 | Protein_42 | helix-turn-helix transcriptional regulator | - |
| RG68_RS25900 () | 37060..38496 | + | 1437 | WP_000105383.1 | glutathione synthase | - |
| RG68_RS25905 () | 38896..39699 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| RG68_RS25910 () | 39699..40535 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| RG68_RS25920 () | 40871..41686 | + | 816 | WP_000018321.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| RG68_RS25925 () | 41980..42684 | - | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| RG68_RS25930 () | 43269..43613 | + | 345 | WP_000793307.1 | hypothetical protein | - |
| RG68_RS25935 () | 43789..44790 | - | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| RG68_RS25940 () | 45142..45396 | + | 255 | WP_000343103.1 | hypothetical protein | - |
| RG68_RS25945 () | 45396..45986 | + | 591 | WP_000194550.1 | hypothetical protein | - |
| RG68_RS25950 () | 46004..46351 | - | 348 | WP_000142436.1 | hypothetical protein | - |
| RG68_RS25955 () | 46470..46817 | + | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| RG68_RS25960 () | 46835..48715 | - | 1881 | WP_001283341.1 | colicin 1B | - |
| RG68_RS25965 () | 48994..50340 | - | 1347 | WP_001132032.1 | hypothetical protein | - |
| RG68_RS25975 () | 50694..51296 | + | 603 | WP_000517695.1 | hypothetical protein | - |
| RG68_RS25980 () | 51352..51846 | + | 495 | WP_001459505.1 | hypothetical protein | - |
| RG68_RS29230 () | 51846..52112 | + | 267 | WP_000955263.1 | hypothetical protein | - |
| RG68_RS25995 () | 52589..53062 | - | 474 | WP_001334658.1 | hypothetical protein | - |
| RG68_RS26000 () | 53179..54027 | - | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| RG68_RS26005 () | 54067..54348 | - | 282 | WP_000970007.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| RG68_RS26010 () | 54345..54614 | - | 270 | WP_000079941.1 | hypothetical protein | Antitoxin Detail |
| RG68_RS29070 () | 54669..54827 | - | 159 | WP_000841008.1 | hypothetical protein | - |
| RG68_RS26025 () | 55523..56554 | - | 1032 | WP_000907873.1 | replication initiation protein | - |
| RG68_RS26040 () | 57527..57790 | + | 264 | WP_001324596.1 | ash family protein | - |
| RG68_RS26045 () | 57708..57995 | + | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| RG68_RS26055 () | 58437..58970 | + | 534 | WP_001303319.1 | transcription termination factor NusG | - |
| RG68_RS26065 () | 59224..59907 | + | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| RG68_RS26070 () | 59921..60487 | + | 567 | WP_000776428.1 | hypothetical protein | - |
| RG68_RS26075 () | 60755..61009 | + | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| RG68_RS26080 () | 61052..61504 | + | 453 | WP_000008892.1 | hypothetical protein | - |
| RG68_RS26090 () | 62178..63245 | + | 1068 | WP_000742600.1 | hypothetical protein | VF |
| RG68_RS26095 () | 63245..63682 | + | 438 | WP_000539807.1 | hypothetical protein | VF |
| RG68_RS26100 () | 63696..65378 | + | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| RG68_RS26105 () | 65371..66666 | + | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| RG68_RS26110 () | 66653..67105 | + | 453 | WP_001247336.1 | hypothetical protein | VF |
| RG68_RS26115 () | 67116..68669 | + | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| RG68_RS26120 () | 68682..69779 | + | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| RG68_RS26125 () | 69797..70411 | + | 615 | WP_000959785.1 | hypothetical protein | VF |
| RG68_RS26130 () | 70421..70981 | + | 561 | WP_000014116.1 | hypothetical protein | VF |
| RG68_RS26135 () | 70966..71622 | + | 657 | WP_001193553.1 | hypothetical protein | VF |
| RG68_RS26140 () | 71622..73046 | + | 1425 | WP_023278060.1 | hypothetical protein | VF |
| RG68_RS29235 () | 73043..73297 | - | 255 | WP_171904539.1 | prepilin | - |
| RG68_RS28715 () | 73294..73512 | - | 219 | WP_071527775.1 | shufflon protein D' | - |
| RG68_RS28725 () | 73561..73647 | - | 87 | Protein_85 | shufflon protein D' | - |
| RG68_RS26155 () | 73646..74800 | + | 1155 | WP_001139958.1 | integrase | - |
| RG68_RS26160 () | 74951..75775 | + | 825 | WP_001238927.1 | hypothetical protein | - |
| RG68_RS26165 () | 75861..77063 | + | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| RG68_RS26170 () | 77123..77707 | + | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| RG68_RS26175 () | 78102..78560 | + | 459 | WP_001079808.1 | hypothetical protein | VF |
| RG68_RS26180 () | 78557..79375 | + | 819 | WP_000646097.1 | hypothetical protein | VF |
| RG68_RS26185 () | 79372..80520 | + | 1149 | WP_001024972.1 | putative protein YggR | VF |
| RG68_RS26190 () | 80517..80807 | + | 291 | WP_001299214.1 | hypothetical protein | - |
| RG68_RS26195 () | 80822..81373 | + | 552 | WP_000014584.1 | Phospholipase D | VF |
| RG68_RS26200 () | 81463..85230 | + | 3768 | WP_073546708.1 | DNA primase | - |
| RG68_RS26205 () | 85248..85595 | + | 348 | WP_001055900.1 | conjugal transfer protein | - |
| RG68_RS26210 () | 85592..86284 | + | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| RG68_RS26215 () | 86295..87278 | + | 984 | WP_001191878.1 | hypothetical protein | VF |
| RG68_RS26220 () | 87281..88570 | + | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| RG68_RS26225 () | 88570..89274 | + | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| RG68_RS26230 () | 89274..89801 | + | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| RG68_RS26235 () | 89852..90256 | + | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| RG68_RS26240 () | 90320..90508 | + | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| RG68_RS26245 () | 90492..91292 | + | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| RG68_RS26250 () | 91382..94426 | + | 3045 | WP_001024752.1 | IncI1-type conjugal transfer protein TraU | - |
| RG68_RS26255 () | 94426..95040 | + | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| RG68_RS26260 () | 95007..96209 | + | 1203 | WP_001189159.1 | IncI1-type conjugal transfer protein TraW | - |
| RG68_RS26265 () | 96238..96822 | + | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| RG68_RS26270 () | 96919..99087 | + | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| RG68_RS26275 () | 99163..99777 | + | 615 | WP_000578649.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| RG68_RS26280 () | 99875..100084 | + | 210 | WP_001140545.1 | hemolysin expression modulator Hha | - |
| RG68_RS29240 () | 100293..100469 | + | 177 | WP_001054900.1 | hypothetical protein | - |
| - () | 100954..101005 | + | 52 | NuclAT_2 | - | - |
| - () | 100954..101005 | + | 52 | NuclAT_2 | - | - |
| - () | 100954..101005 | + | 52 | NuclAT_2 | - | - |
| - () | 100954..101005 | + | 52 | NuclAT_2 | - | - |
| RG68_RS26300 () | 101392..101643 | + | 252 | WP_001291965.1 | hypothetical protein | - |
| RG68_RS26305 () | 101715..101867 | - | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| - () | 101917..101979 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 101917..101979 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 101917..101979 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 101917..101979 | + | 63 | NuclAT_0 | - | Antitoxin Detail |
| RG68_RS26310 () | 102182..103273 | + | 1092 | WP_000426061.1 | hypothetical protein | - |
| - () | 103340..103400 | + | 61 | NuclAT_1 | - | - |
| - () | 103340..103400 | + | 61 | NuclAT_1 | - | - |
| - () | 103340..103400 | + | 61 | NuclAT_1 | - | - |
| - () | 103340..103400 | + | 61 | NuclAT_1 | - | - |
| RG68_RS26315 () | 103580..104788 | + | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| RG68_RS26320 () | 104807..105877 | + | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| RG68_RS26325 () | 105870..108161 | + | 2292 | WP_001289276.1 | hypothetical protein | - |
| RG68_RS26330 () | 108198..110897 | - | 2700 | WP_001306778.1 | Protein TraI | Relaxase |
| RG68_RS26335 () | 110908..111240 | - | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| RG68_RS26340 () | 111474..111809 | + | 336 | WP_000157098.1 | hypothetical protein | - |
| RG68_RS26345 () | 111894..112742 | - | 849 | WP_073546709.1 | DUF4942 domain-containing protein | - |
| RG68_RS29245 () | 113091..113288 | + | 198 | WP_001412266.1 | hypothetical protein | - |
| RG68_RS26360 () | 113322..113573 | + | 252 | WP_000148285.1 | helix-turn-helix domain-containing protein | - |
| RG68_RS29250 () | 113604..113774 | - | 171 | WP_000150325.1 | hypothetical protein | - |
| RG68_RS26370 () | 113836..114777 | - | 942 | WP_000038339.1 | Recombination-promoting nuclease RpnA | VF |
| RG68_RS26375 () | 114842..115108 | - | 267 | WP_001247862.1 | hypothetical protein | - |
| RG68_RS26380 () | 115200..115634 | - | 435 | WP_000218863.1 | hypothetical protein | - |
| RG68_RS26390 () | 116363..116863 | - | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| RG68_RS26400 () | 117326..117922 | - | 597 | WP_000978012.1 | hypothetical protein | - |
| RG68_RS26405 () | 117919..118638 | - | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| RG68_RS26410 () | 118635..119069 | - | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| RG68_RS26415 () | 119124..121082 | - | 1959 | WP_073546710.1 | ParB/RepB/Spo0J family partition protein | - |
| RG68_RS26420 () | 121141..121374 | - | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| RG68_RS26425 () | 121432..121959 | - | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| RG68_RS29255 () | 122328..122396 | + | 69 | Protein_136 | pilus protein | - |
| RG68_RS26440 () | 122729..122920 | - | 192 | WP_001027500.1 | hypothetical protein | - |
| RG68_RS26445 () | 122917..123339 | - | 423 | WP_000271729.1 | DUF1380 family protein | - |
| RG68_RS26450 () | 123386..123688 | - | 303 | WP_072132163.1 | antirestriction protein | - |
| RG68_RS29075 () | 124229..124999 | - | 771 | WP_001044393.1 | hypothetical protein | - |
| RG68_RS26465 () | 125050..125484 | - | 435 | WP_000274403.1 | DUF1380 family protein | - |
| RG68_RS26470 () | 125496..125717 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| RG68_RS26475 () | 125718..126401 | - | 684 | WP_000086178.1 | DNA methylase | - |
| RG68_RS26480 () | 126478..126789 | - | 312 | WP_010891263.1 | hypothetical protein | - |
| RG68_RS26485 () | 126786..127688 | - | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| RG68_RS26495 () | 128106..128354 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| RG68_RS26500 () | 128351..128788 | + | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| RG68_RS26505 () | 128788..130062 | + | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| RG68_RS26510 () | 130064..130480 | - | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| RG68_RS26515 () | 130473..131453 | - | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| RG68_RS26520 () | 131867..132175 | - | 309 | WP_000030199.1 | hypothetical protein | - |
| RG68_RS26525 () | 132262..132906 | - | 645 | WP_001144036.1 | ParA family protein | - |
| RG68_RS26530 () | 133086..133865 | - | 780 | WP_021537353.1 | site-specific integrase | - |
| RG68_RS26535 () | 133867..134280 | - | 414 | WP_000465036.1 | hypothetical protein | - |
| RG68_RS26540 () | 134960..135955 | + | 996 | WP_000246635.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|