MGE detailed information
MGE type: Prophage MGE length: 79634 bp
Accession: NZ_CP010226 Location: 3155188..3234821 Organism: Escherichia coli strain S1 Replicon: chromosome
Accession: NZ_CP010226 Location: 3155188..3234821 Organism: Escherichia coli strain S1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RG64_RS26780 () | 3150292..3150555 | - | 264 | WP_001247776.1 | transposase | - |
| RG64_RS26785 () | 3150570..3150833 | + | 264 | WP_001295708.1 | hypothetical protein | - |
| RG64_RS17200 () | 3151063..3151344 | + | 282 | WP_073527467.1 | helix-turn-helix domain-containing protein | - |
| RG64_RS17205 () | 3151379..3151948 | + | 570 | WP_000350437.1 | small heat shock protein sHSP20 | - |
| RG64_RS17210 () | 3152054..3154936 | + | 2883 | WP_073527468.1 | heat shock survival AAA family ATPase ClpK | - |
| RG64_RS17215 () | 3154936..3155127 | + | 192 | WP_001295707.1 | hypothetical protein | - |
| RG64_RS17220 () | 3155188..3156915 | + | 1728 | WP_000412528.1 | FtsH/Yme1/Tma family ATP-dependent metallopeptidase | - |
| RG64_RS17225 () | 3157003..3157461 | + | 459 | WP_001275372.1 | hypothetical protein | VF |
| RG64_RS17230 () | 3157484..3158398 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| RG64_RS17235 () | 3158501..3159388 | + | 888 | WP_001005473.1 | heat resistance protein YfdX2 | - |
| RG64_RS17240 () | 3159478..3160089 | + | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| RG64_RS17245 () | 3160169..3161314 | + | 1146 | WP_001166995.1 | hypothetical protein | - |
| RG64_RS17250 () | 3161304..3161744 | + | 441 | WP_000786817.1 | heat resistance system thioredoxin Trx-GI | - |
| RG64_RS17255 () | 3161748..3163463 | + | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| RG64_RS17260 () | 3163460..3163957 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| RG64_RS17265 () | 3163935..3164900 | + | 966 | WP_016241903.1 | M48 family metalloprotease | - |
| RG64_RS17270 () | 3164925..3166076 | + | 1152 | WP_000323727.1 | hypothetical protein | VF |
| RG64_RS26230 () | 3166301..3166870 | - | 570 | Protein_3049 | IS5 family transposase ISThi1 | Transposase |
| RG64_RS26235 () | 3166866..3167560 | - | 695 | Protein_3050 | IS5 family transposase ISThi1 | Transposase |
| RG64_RS17280 () | 3167992..3168855 | + | 864 | WP_001065555.1 | GTPase family protein | - |
| RG64_RS17285 () | 3168947..3169768 | + | 822 | WP_000197387.1 | DUF945 domain-containing protein | - |
| RG64_RS17290 () | 3169985..3170686 | + | 702 | WP_000189411.1 | WYL domain-containing protein | - |
| RG64_RS17295 () | 3170727..3170963 | + | 237 | WP_001144031.1 | hypothetical protein | - |
| RG64_RS17300 () | 3170963..3171406 | + | 444 | WP_000649865.1 | hypothetical protein | - |
| RG64_RS17305 () | 3171429..3171896 | + | 468 | WP_001385283.1 | hypothetical protein | - |
| RG64_RS17310 () | 3171973..3172212 | + | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| RG64_RS17315 () | 3172310..3172768 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| RG64_RS17320 () | 3172784..3173260 | + | 477 | WP_000811693.1 | RadC family protein | - |
| RG64_RS17325 () | 3173269..3173490 | + | 222 | WP_000691994.1 | DUF987 domain-containing protein | - |
| RG64_RS17330 () | 3173509..3173826 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| RG64_RS17335 () | 3173847..3174188 | + | 342 | WP_032293845.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| RG64_RS17340 () | 3174854..3175063 | + | 210 | Protein_3063 | IS3 family transposase ISEc48 | Transposase |
| RG64_RS17345 () | 3175105..3175848 | - | 744 | WP_032177817.1 | AraC family transcriptional regulator | - |
| RG64_RS17355 () | 3176236..3177147 | - | 912 | WP_073527469.1 | IS5 family transposase ISKpn26 | Transposase |
| RG64_RS17360 () | 3177500..3178564 | + | 1065 | WP_072003692.1 | hypothetical protein | VF |
| RG64_RS17365 () | 3178596..3178961 | - | 366 | WP_077758612.1 | tail fiber assembly protein | - |
| RG64_RS17370 () | 3178958..3179521 | - | 564 | WP_073527470.1 | tail fiber protein | - |
| RG64_RS17375 () | 3179589..3179729 | - | 141 | Protein_3069 | lysozyme | - |
| RG64_RS17380 () | 3179716..3180021 | - | 306 | WP_000544528.1 | phage holin family protein | - |
| RG64_RS17385 () | 3180343..3181032 | - | 690 | WP_073527471.1 | antitermination protein | - |
| RG64_RS17390 () | 3181029..3181169 | - | 141 | WP_000971093.1 | YlcG family protein | - |
| RG64_RS17395 () | 3181166..3181528 | - | 363 | WP_073527472.1 | crossover junction endodeoxyribonuclease RusA | - |
| RG64_RS17400 () | 3181525..3181815 | - | 291 | WP_073527473.1 | DUF1364 domain-containing protein | - |
| RG64_RS17405 () | 3181808..3181978 | - | 171 | WP_000224914.1 | hypothetical protein | - |
| RG64_RS17410 () | 3181978..3182433 | - | 456 | WP_073527474.1 | DNA base-flipping protein YbcN | - |
| RG64_RS17415 () | 3182430..3182531 | - | 102 | WP_073527475.1 | hypothetical protein | - |
| RG64_RS17420 () | 3182624..3183076 | - | 453 | WP_000825400.1 | hypothetical protein | - |
| RG64_RS17425 () | 3183073..3183633 | - | 561 | WP_000720581.1 | hypothetical protein | - |
| RG64_RS17435 () | 3184119..3184327 | - | 209 | Protein_3080 | protein ren | - |
| RG64_RS17440 () | 3184488..3185216 | + | 729 | WP_016243514.1 | porin family protein | - |
| RG64_RS17450 () | 3185707..3186408 | - | 702 | WP_073527476.1 | Replication protein P | - |
| RG64_RS17455 () | 3186405..3187424 | - | 1020 | WP_001446384.1 | replication protein | - |
| RG64_RS17460 () | 3187421..3187960 | - | 540 | WP_001566184.1 | toxin YdaT domain-containing protein | - |
| RG64_RS17465 () | 3187991..3188218 | - | 228 | WP_000184665.1 | helix-turn-helix domain-containing protein | - |
| RG64_RS17470 () | 3188329..3189021 | + | 693 | WP_024185289.1 | helix-turn-helix transcriptional regulator | - |
| RG64_RS17475 () | 3189088..3189951 | + | 864 | WP_000340376.1 | hypothetical protein | - |
| RG64_RS17480 () | 3190428..3190634 | + | 207 | WP_000233576.1 | phage encoded cell division inhibitor protein | - |
| RG64_RS17485 () | 3190711..3191007 | + | 297 | WP_000995420.1 | host-nuclease inhibitor protein Gam | - |
| RG64_RS17490 () | 3191013..3191798 | + | 786 | WP_073527477.1 | phage recombination protein Bet | - |
| RG64_RS17495 () | 3191795..3192475 | + | 681 | WP_016246895.1 | YqaJ viral recombinase family protein | - |
| RG64_RS17500 () | 3192472..3192654 | + | 183 | WP_000682311.1 | DUF1317 domain-containing protein | - |
| RG64_RS17505 () | 3192627..3192818 | + | 192 | WP_016246896.1 | DUF1382 family protein | - |
| RG64_RS17515 () | 3192895..3193110 | + | 216 | WP_000188870.1 | hypothetical protein | - |
| RG64_RS17520 () | 3193209..3193427 | + | 219 | WP_016246897.1 | TraR/DksA family transcriptional regulator | - |
| RG64_RS17525 () | 3193475..3193753 | + | 279 | WP_000488407.1 | DUF4222 domain-containing protein | - |
| RG64_RS17535 () | 3193952..3195115 | + | 1164 | WP_033868771.1 | hypothetical protein ; Integrase | Integrase |
| RG64_RS17545 () | 3195320..3196573 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| RG64_RS17550 () | 3196585..3197688 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| RG64_RS17555 () | 3197976..3199031 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| RG64_RS17560 () | 3199070..3199471 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| RG64_RS17565 () | 3199529..3200773 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3200189..3200269 | - | 81 | NuclAT_11 | - | - |
| - () | 3200189..3200269 | - | 81 | NuclAT_11 | - | - |
| - () | 3200189..3200269 | - | 81 | NuclAT_11 | - | - |
| - () | 3200189..3200269 | - | 81 | NuclAT_11 | - | - |
| RG64_RS17570 () | 3200865..3201323 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| RG64_RS17575 () | 3201584..3203041 | + | 1458 | WP_001293002.1 | cytosol nonspecific dipeptidase | - |
| RG64_RS17580 () | 3203098..3203619 | - | 522 | Protein_3105 | peptide chain release factor H | - |
| RG64_RS17585 () | 3203618..3203821 | - | 204 | Protein_3106 | RNA ligase RtcB family protein | - |
| RG64_RS17590 () | 3204067..3204519 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| RG64_RS17595 () | 3204529..3204927 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| RG64_RS17600 () | 3204930..3205223 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| RG64_RS17605 () | 3205275..3206330 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| RG64_RS17610 () | 3206401..3207186 | - | 786 | WP_000207587.1 | hypothetical protein | VF |
| RG64_RS17615 () | 3207158..3208870 | + | 1713 | Protein_3112 | hypothetical protein | VF |
| RG64_RS17630 () | 3209086..3209583 | - | 498 | WP_000006261.1 | REP-associated tyrosine transposase RayT | - |
| RG64_RS17640 () | 3209759..3210532 | - | 774 | WP_001353765.1 | hypothetical protein | VF |
| RG64_RS17645 () | 3210718..3210978 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| RG64_RS17650 () | 3210981..3211259 | + | 279 | WP_000615979.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| RG64_RS17655 () | 3211415..3212155 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| RG64_RS17660 () | 3212126..3212893 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| RG64_RS17665 () | 3213099..3213677 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| RG64_RS17670 () | 3213917..3216361 | + | 2445 | WP_000973083.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| RG64_RS17675 () | 3216404..3216850 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| RG64_RS17680 () | 3217031..3217801 | + | 771 | WP_001118040.1 | 2-oxoglutaramate amidase | - |
| RG64_RS17685 () | 3217852..3218226 | - | 375 | Protein_3123 | ISAs1 family transposase ISEc1 | Transposase |
| RG64_RS26800 () | 3218272..3218469 | - | 198 | Protein_3124 | ISAs1 family transposase | - |
| RG64_RS27110 () | 3218525..3219208 | + | 684 | Protein_3125 | IS1 family transposase | - |
| RG64_RS17715 () | 3219640..3220371 | - | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| RG64_RS17720 () | 3220436..3220903 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| RG64_RS17725 () | 3220900..3221622 | - | 723 | WP_001295200.1 | class I SAM-dependent methyltransferase | - |
| RG64_RS17730 () | 3221656..3222411 | + | 756 | WP_001052721.1 | hydroxyacylglutathione hydrolase | - |
| RG64_RS17735 () | 3222483..3223841 | + | 1359 | WP_032238571.1 | hypothetical protein | VF |
| RG64_RS17740 () | 3223889..3224485 | - | 597 | Protein_3131 | methyltransferase domain-containing protein | - |
| RG64_RS17745 () | 3224516..3225316 | - | 801 | WP_073527478.1 | endonuclease/exonuclease/phosphatase family protein | - |
| RG64_RS17750 () | 3225557..3226471 | + | 915 | WP_000648577.1 | HTH-type transcriptional regulator ArgP | VF |
| RG64_RS17755 () | 3226468..3227271 | - | 804 | WP_000997033.1 | 2,5-didehydrogluconate reductase DkgB | - |
| RG64_RS17790 () | 3233030..3233602 | - | 573 | WP_001140174.1 | Histidine biosynthesis bifunctional protein HisB | VF |
| RG64_RS17795 () | 3233790..3234821 | + | 1032 | WP_000593994.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| RG64_RS17800 () | 3234814..3235467 | + | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
| RG64_RS17805 () | 3235507..3236322 | + | 816 | WP_000874226.1 | methionine ABC transporter substrate-binding lipoprotein MetQ | - |
| RG64_RS17810 () | 3236440..3236844 | + | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| RG64_RS17815 () | 3236841..3237548 | + | 708 | WP_000094011.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| RG64_RS17820 () | 3237659..3239377 | + | 1719 | WP_001260712.1 | proline--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|