NZ_CP0101411..174041

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 174041 bp
Accession: NZ_CP010141        Location: 1..174041         Organism: Escherichia coli strain D3       Replicon: plasmid A


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
RG36_RS26190 () 8..844 - 837 WP_000480968.1 hypothetical protein ARG
RG36_RS26195 () 844..1647 - 804 WP_001082319.1 Aminoglycoside 3'-phosphotransferase ARG
RG36_RS26200 () 1708..2523 - 816 WP_001043265.1 Dihydropteroate synthase ARG
RG36_RS26210 () 2831..3418 - 588 Protein_4 replication protein C -
RG36_RS26215 () 3483..4187 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
RG36_RS26225 () 4310..5215 + 906 WP_000219391.1 hypothetical protein ARG
RG36_RS26230 () 5212..6450 + 1239 WP_000004159.1 MFS transporter -
RG36_RS26235 () 6450..7034 + 585 WP_001137892.1 TetR family transcriptional regulator -
RG36_RS26245 () 7527..8291 - 765 WP_001389365.1 IS6-like element IS6100 family transposase -
RG36_RS26260 () 8452..9156 - 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
RG36_RS26270 () 9473..10030 + 558 WP_001235713.1 Tn3 family transposase TnpR_Tn3 Transposase
RG36_RS26275 () 10213..11073 + 861 WP_000027057.1 Beta-lactamase TEM ARG
RG36_RS26280 () 11222..11899 + 678 Protein_13 IS4 family transposase IS10R Transposase
RG36_RS26285 () 11912..12820 + 909 Protein_14 IS4 family transposase IS10R Transposase
RG36_RS26290 () 12836..12955 - 120 Protein_15 LysR family transcriptional regulator -
RG36_RS26295 () 13186..14391 - 1206 WP_000599533.1 sodium/glutamate symporter -
RG36_RS26300 () 14835..15155 + 321 WP_000562367.1 antibiotic biosynthesis monooxygenase -
RG36_RS26305 () 15148..15534 + 387 WP_000460653.1 hypothetical protein -
RG36_RS26310 () 15542..16228 + 687 WP_001284954.1 winged helix-turn-helix domain-containing protein -
RG36_RS26315 () 16206..16829 - 624 WP_000088605.1 Tetracycline repressor protein class B from transposon Tn10 VF
RG36_RS26320 () 16911..18116 + 1206 WP_001089068.1 Tetracycline resistance protein, class B ARG
RG36_RS26325 () 18229..18822 - 594 WP_000428546.1 tetracyline resistance-associated transcriptional repressor TetC -
RG36_RS26330 () 18910..19332 + 423 Protein_23 Transposon Tn10 TetD protein VF
RG36_RS26335 () 19307..19729 - 423 Protein_24 Transposon Tn10 TetD protein VF
RG36_RS26340 () 19817..20410 + 594 WP_000428546.1 tetracyline resistance-associated transcriptional repressor TetC -
RG36_RS26345 () 20523..21728 - 1206 WP_001089068.1 Tetracycline resistance protein, class B ARG
RG36_RS26350 () 21810..22433 + 624 WP_000088605.1 Tetracycline repressor protein class B from transposon Tn10 VF
RG36_RS26355 () 22411..23097 - 687 WP_001284954.1 winged helix-turn-helix domain-containing protein -
RG36_RS26360 () 23105..23491 - 387 WP_000460653.1 hypothetical protein -
RG36_RS26365 () 23484..23804 - 321 WP_000562367.1 antibiotic biosynthesis monooxygenase -
RG36_RS26370 () 24248..25453 + 1206 WP_000599533.1 sodium/glutamate symporter -
RG36_RS26375 () 25684..25803 + 120 Protein_32 LysR family transcriptional regulator -
RG36_RS26380 () 25819..27027 - 1209 WP_001352368.1 IS4 family transposase IS10R Transposase
RG36_RS26385 () 27188..27847 + 660 WP_000412211.1 Chloramphenicol acetyltransferase ARG
RG36_RS26390 () 28048..28425 - 378 WP_000656305.1 GNAT family N-acetyltransferase -
RG36_RS26395 () 28492..31458 - 2967 WP_001138064.1 Tn3 family transposase TnpA_TnAs3 Transposase
RG36_RS26400 () 31461..32021 - 561 WP_000147567.1 Tn3 family transposase TnpR_TnAs3 Transposase
RG36_RS29370 () 32147..32497 - 351 WP_000454193.1 DUF3330 domain-containing protein -
RG36_RS26415 () 32700..33713 - 1014 WP_000845048.1 IS91 family transposase ISAzo26 Transposase
RG36_RS26420 () 33871..34344 + 474 WP_001389366.1 trimethoprim-resistant dihydrofolate reductase DfrA17 -
RG36_RS26425 () 34475..35263 + 789 WP_000503573.1 Streptomycin 3''-adenylyltransferase ARG
RG36_RS26430 () 35469..35816 + 348 WP_000679427.1 Multidrug transporter EmrE ARG
RG36_RS26435 () 35810..36649 + 840 WP_000259031.1 Dihydropteroate synthase ARG
RG36_RS26445 () 36777..36980 + 204 WP_000376616.1 hypothetical protein -
RG36_RS26450 () 37136..38341 + 1206 WP_000184001.1 chromate efflux transporter -
RG36_RS26455 () 38352..38656 + 305 Protein_46 helix-turn-helix transcriptional regulator -
RG36_RS26465 () 38847..39551 + 705 WP_001067858.1 IS6 family transposase IS15DI Transposase
RG36_RS26470 () 39606..39893 + 288 Protein_48 transposase -
RG36_RS26480 () 40149..41024 + 876 WP_015387340.1 Beta-lactamase CTX-M-1 ARG
RG36_RS26485 () 41071..41403 - 333 WP_001393253.1 WbuC family cupin fold metalloprotein -
RG36_RS26490 () 41417..44212 + 2796 Protein_51 Tn3 family transposase TnpA_Tn3 Transposase
RG36_RS26495 () 44248..45108 - 861 Protein_52 IS66 family transposase ISEc8 Transposase
RG36_RS26500 () 45158..45505 - 348 WP_000612591.1 IS66 family transposase ISEc8 Transposase
RG36_RS26505 () 45502..45882 - 381 WP_001171523.1 IS66 family transposase ISEc8 Transposase
RG36_RS26510 () 45958..46938 - 981 WP_001017346.1 NAD(P)-binding domain-containing protein -
RG36_RS26515 () 46935..47204 - 270 WP_000379710.1 SemiSWEET transporter -
RG36_RS26520 () 47206..47983 - 778 Protein_57 Gfo/Idh/MocA family oxidoreductase -
RG36_RS29375 () 48144..48380 + 237 WP_001323890.1 colicin V immunity protein -
RG36_RS26530 () 48358..48669 + 312 WP_001259758.1 colicin V -
RG36_RS26535 () 48839..50953 - 2115 WP_001183604.1 peptidase domain-containing ABC transporter -
RG36_RS26540 () 50928..52202 - 1275 WP_000489609.1 HlyD family secretion protein -
RG36_RS26550 () 52884..53081 + 198 WP_001324224.1 toxin-antitoxin system protein Antitoxin Detail
RG36_RS26555 () 53078..53260 + 183 WP_000969988.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
RG36_RS26560 () 53359..53667 + 309 WP_000377483.1 hypothetical protein -
RG36_RS26570 () 54227..55261 + 1035 WP_001190234.1 3-deoxy-7-phosphoheptulonate synthase -
RG36_RS26590 () 56127..58304 + 2178 WP_001222186.1 Ferric enterobactin receptor VF
RG36_RS26595 () 58349..59305 - 957 WP_000271274.1 Ferri-bacillibactin esterase BesA VF
RG36_RS26600 () 59390..60619 - 1230 WP_000933678.1 Enterochelin esterase VF
RG36_RS26605 () 60723..64382 - 3660 WP_001389363.1 Multidrug efflux ATP-binding/permease protein VF
RG36_RS26610 () 64522..65637 - 1116 WP_001318220.1 Elloramycin glycosyltransferase ElmGT VF
RG36_RS28505 () 66873..67972 - 1100 Protein_71 IS481 family transposase ISKpn28 Transposase
RG36_RS26635 () 68526..68725 + 200 Protein_72 lysis protein -
RG36_RS26640 () 68783..69076 - 294 WP_000738422.1 increased serum survival lipoprotein Iss -
RG36_RS26655 () 69656..70221 + 566 Protein_74 IS3 family transposase IS2 Transposase
RG36_RS26675 () 71462..72190 + 729 Protein_76 IS3 family transposase IS2 Transposase
RG36_RS26690 () 73432..74625 + 1194 WP_000450494.1 GTP-binding protein -
RG36_RS29085 () 74803..74952 + 150 Protein_78 IS3 family transposase IS2 Transposase
RG36_RS26705 () 75262..76651 + 1390 Protein_79 ISNCY family transposase ISKpn21 Transposase
RG36_RS26715 () 76886..77827 + 942 WP_000974762.1 hypothetical protein -
RG36_RS26720 () 77956..78150 - 195 Protein_81 IS200-IS605 family transposase IS200C Transposase
RG36_RS26730 () 78624..79994 - 1371 WP_001312828.1 efflux transporter outer membrane subunit -
RG36_RS26735 () 79998..81938 - 1941 WP_000733250.1 Macrolide export ATP-binding/permease protein MacB VF
RG36_RS26740 () 81935..83122 - 1188 WP_000928804.1 efflux RND transporter periplasmic adaptor subunit -
RG36_RS26745 () 84103..84428 + 326 Protein_85 IS3 family transposase IS911 Transposase
RG36_RS28515 () 84576..85775 - 1200 Protein_86 IS3 family transposase IS629 Transposase
RG36_RS28520 () 85959..86117 + 159 WP_001324039.1 integrase core domain-containing protein -
RG36_RS26780 () 87390..88343 + 954 WP_000280980.1 Protease 7 VF
RG36_RS26790 () 88776..89885 + 1110 WP_000771475.1 SDR family oxidoreductase -
RG36_RS26795 () 89954..90856 + 903 WP_001312822.1 hypothetical protein VF
RG36_RS26800 () 91230..91418 + 189 WP_001324033.1 hypothetical protein -
RG36_RS26805 () 91539..92279 + 741 WP_001066954.1 tyrosine-type recombinase/integrase -
RG36_RS26810 () 92564..93541 - 978 WP_000361611.1 RepB family plasmid replication initiator protein -
RG36_RS28525 () 94287..94610 + 324 Protein_94 IS21 family transposase IS21 Transposase
RG36_RS29515 () 94612..94716 + 105 Protein_95 AAA family ATPase -
RG36_RS26835 () 94777..95290 + 514 Protein_96 DUF4113 domain-containing protein -
RG36_RS26840 () 95470..96167 - 698 Protein_97 IS1 family transposase IS1S Transposase
RG36_RS26865 () 96523..97437 + 915 WP_000949004.1 Putative metal ABC transporter substrate-binding protein Hpf VF
RG36_RS26870 () 97437..98264 + 828 WP_000983710.1 Iron(3+)-hydroxamate import ATP-binding protein FhuC VF
RG36_RS26875 () 98261..99118 + 858 WP_001101723.1 Manganese transport system membrane protein MntB ARG
RG36_RS26880 () 99115..99972 + 858 WP_000968139.1 Manganese transport system membrane protein MntB ARG
RG36_RS26885 () 100461..100874 + 414 Protein_102 phosphopyruvate hydratase -
RG36_RS26895 () 101215..101595 + 381 WP_001318207.1 fluoride efflux transporter CrcB -
RG36_RS26900 () 101975..103168 - 1194 WP_000095526.1 MFS transporter -
RG36_RS26905 () 103304..105028 + 1725 WP_000602863.1 N(2)-citryl-N(6)-acetyl-N(6)-hydroxylysine synthase VF
RG36_RS26910 () 105029..105976 + 948 WP_000011910.1 N(6)-hydroxylysine O-acetyltransferase VF
RG36_RS26915 () 105976..107718 + 1743 WP_001015721.1 Aerobactin synthase VF
RG36_RS26920 () 107715..108992 + 1278 WP_000750130.1 L-lysine N6-monooxygenase VF
RG36_RS26925 () 109074..111275 + 2202 WP_000973520.1 Ferric aerobactin receptor VF
RG36_RS26950 () 111760..112457 + 698 Protein_110 IS1 family transposase IS1S Transposase
RG36_RS26955 () 112757..113923 + 1167 WP_001238646.1 Sporulation initiation inhibitor protein Soj VF
RG36_RS26960 () 113923..114894 + 972 WP_000817028.1 ParB/RepB/Spo0J family plasmid partition protein -
RG36_RS29520 () 116033..116239 + 207 WP_000275856.1 hypothetical protein -
RG36_RS26975 () 116265..116804 + 540 WP_000290840.1 single-stranded DNA-binding protein -
RG36_RS26980 () 116872..117105 + 234 WP_000005987.1 DUF905 family protein -
RG36_RS26985 () 117133..117330 + 198 Protein_116 hypothetical protein -
RG36_RS26990 () 117385..117819 + 435 WP_000845936.1 conjugation system SOS inhibitor PsiB -
RG36_RS26995 () 117816..118535 + 720 WP_001276238.1 plasmid SOS inhibition protein A -
RG36_RS29385 () 118547..118735 - 189 WP_001299721.1 hypothetical protein -
- () 118547..118771 + 225 NuclAT_0 - -
- () 118547..118771 + 225 NuclAT_0 - -
- () 118547..118771 + 225 NuclAT_0 - -
- () 118547..118771 + 225 NuclAT_0 - -
RG36_RS27005 () 118815..118973 + 159 WP_001312861.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
RG36_RS27025 () 119894..120181 + 288 WP_000107535.1 hypothetical protein -
RG36_RS27030 () 120299..121120 + 822 WP_001234426.1 DUF945 domain-containing protein -
RG36_RS27035 () 121417..122019 - 603 WP_000243712.1 hypothetical protein VF
RG36_RS27045 () 122340..122723 + 384 WP_001151524.1 relaxosome protein TraM -
RG36_RS27050 () 122910..123599 + 690 WP_000283385.1 conjugal transfer transcriptional regulator TraJ -
RG36_RS27055 () 123698..124093 + 396 WP_001309237.1 conjugal transfer relaxosome protein TraY -
RG36_RS27060 () 124126..124491 + 366 WP_000994779.1 type IV conjugative transfer system pilin TraA -
RG36_RS27065 () 124506..124817 + 312 WP_000012106.1 type IV conjugative transfer system protein TraL -
RG36_RS27070 () 124839..125405 + 567 WP_000399792.1 type IV conjugative transfer system protein TraE -
RG36_RS27075 () 125416..126120 + 705 WP_072095570.1 type-F conjugative transfer system secretin TraK -
RG36_RS27080 () 126120..127547 + 1428 WP_000146685.1 conjugal transfer protein TraB -
RG36_RS27085 () 127537..128127 + 591 WP_001376242.1 conjugal transfer protein TraP -
RG36_RS27090 () 128081..128311 + 231 WP_001352845.1 conjugal transfer protein TrbD -
RG36_RS27095 () 128323..128574 + 252 WP_001038342.1 conjugal transfer protein TrbG -
RG36_RS27100 () 128571..129086 + 516 WP_000809838.1 type IV conjugative transfer system lipoprotein TraV -
RG36_RS27105 () 129221..129442 + 222 WP_001278689.1 conjugal transfer protein TraR -
RG36_RS27110 () 129602..132229 + 2628 WP_001064245.1 type IV secretion system protein TraC -
RG36_RS27115 () 132226..132612 + 387 WP_000099686.1 type-F conjugative transfer system protein TrbI -
RG36_RS27120 () 132609..133241 + 633 WP_001203720.1 type-F conjugative transfer system protein TraW -
RG36_RS27125 () 133238..134230 + 993 WP_000830183.1 conjugal transfer pilus assembly protein TraU -
RG36_RS27130 () 134239..134877 + 639 WP_000777700.1 type-F conjugative transfer system pilin assembly protein TrbC -
RG36_RS27135 () 134874..136682 + 1809 WP_000821841.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
RG36_RS27140 () 136709..136966 + 258 WP_000864318.1 conjugal transfer protein TrbE -
RG36_RS27145 () 136959..137702 + 744 WP_001030393.1 type-F conjugative transfer system pilin assembly protein TraF -
RG36_RS27150 () 137718..138065 + 348 WP_001287910.1 conjugal transfer protein TrbA -
RG36_RS27155 () 138067..138381 - 315 WP_001324103.1 hypothetical protein -
RG36_RS27160 () 138462..138746 + 285 WP_000624109.1 type-F conjugative transfer system pilin chaperone TraQ -
RG36_RS27165 () 138733..139278 + 546 WP_000059851.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
RG36_RS27170 () 139208..139549 + 342 WP_001443031.1 P-type conjugative transfer protein TrbJ -
RG36_RS27175 () 139503..139916 + 414 WP_001324104.1 F-type conjugal transfer protein TrbF -
RG36_RS27180 () 139916..141289 + 1374 WP_001517790.1 conjugal transfer protein TraH -
RG36_RS27185 () 141286..144108 + 2823 WP_001007018.1 conjugal transfer mating pair stabilization protein TraG -
RG36_RS27190 () 144124..144621 + 498 WP_000605857.1 entry exclusion protein -
RG36_RS27195 () 144653..145384 + 732 WP_023565183.1 complement resistance protein TraT -
RG36_RS27200 () 145637..147790 + 2154 WP_000009324.1 type IV conjugative transfer system coupling protein TraD -
RG36_RS27205 () 147799..148197 - 399 WP_000911313.1 tRNA(fMet)-specific endonuclease VapC Toxin Detail
RG36_RS27210 () 148197..148424 - 228 WP_000450520.1 toxin-antitoxin system antitoxin VapB Antitoxin Detail
RG36_RS27215 () 148506..153776 + 5271 WP_000986962.1 Multifunctional conjugation protein TraI Relaxase
RG36_RS27220 () 153796..154542 + 747 WP_000205749.1 conjugal transfer pilus acetylase TraX -
RG36_RS27225 () 154601..155461 + 861 WP_000704514.1 putative protein YcjY VF
RG36_RS27230 () 155564..156124 + 561 WP_000139315.1 fertility inhibition protein FinO -
RG36_RS27235 () 156260..156472 + 213 WP_001299730.1 ANR family transcriptional regulator -
RG36_RS29525 () 156718..156792 + 75 Protein_163 endonuclease -
- () 157048..157109 - 62 NuclAT_1 - Antitoxin Detail
- () 157048..157109 - 62 NuclAT_1 - Antitoxin Detail
- () 157048..157109 - 62 NuclAT_1 - Antitoxin Detail
- () 157048..157109 - 62 NuclAT_1 - Antitoxin Detail
RG36_RS27245 () 157096..157302 + 207 WP_001351576.1 type I toxin-antitoxin system Hok family toxin Toxin Detail
RG36_RS27250 () 157586..157843 + 258 WP_000083845.1 replication regulatory protein RepA -
RG36_RS27260 () 158075..158149 + 75 WP_001442103.1 RepA leader peptide Tap -
RG36_RS27265 () 158142..158624 + 483 WP_001273588.1 hypothetical protein -
RG36_RS27270 () 158617..159180 + 564 Protein_168 incFII family plasmid replication initiator RepA -
RG36_RS27275 () 159372..160913 + 1542 WP_001298859.1 IS21 family transposase ISEc12 Transposase
RG36_RS27280 () 160928..161674 + 747 WP_001016257.1 IS21 family transposase ISEc12 Transposase
RG36_RS27285 () 161761..162060 + 300 Protein_171 incFII family plasmid replication initiator RepA -
RG36_RS29530 () 162761..162901 + 141 WP_001333237.1 hypothetical protein -
RG36_RS27295 () 162999..163652 + 654 WP_000616807.1 CPBP family intramembrane metalloprotease -
RG36_RS29390 () 163745..164002 + 258 WP_000557619.1 type II toxin-antitoxin system antitoxin PemI -
RG36_RS27305 () 163935..164336 + 402 WP_001398199.1 type II toxin-antitoxin system toxin endoribonuclease PemK -
RG36_RS27325 () 164585..165282 + 698 Protein_176 IS1 family transposase IS1R Transposase
RG36_RS27330 () 165389..165823 - 435 WP_000429836.1 IS607 family transposase ISChh1 Transposase
RG36_RS27335 () 165895..166245 + 351 WP_001294663.1 mercuric transport protein MerT -
RG36_RS27340 () 166259..166534 + 276 WP_000732292.1 mercury resistance system periplasmic binding protein MerP -
RG36_RS27345 () 166570..166992 + 423 WP_001340589.1 organomercurial transporter MerC -
RG36_RS27350 () 167044..168738 + 1695 WP_000105636.1 mercury(II) reductase -
RG36_RS27355 () 168756..169118 + 363 WP_001277456.1 mercury resistance co-regulator MerD -
RG36_RS27360 () 169115..169351 + 237 WP_000993386.1 broad-spectrum mercury transporter MerE -
RG36_RS27365 () 169387..170055 + 669 WP_001300294.1 putative signaling protein VF
RG36_RS27375 () 170130..171380 + 1251 Protein_185 transposase -
RG36_RS29535 () 171381..171863 + 483 Protein_186 host specificity protein J -
RG36_RS27380 () 171997..172644 + 648 WP_073545351.1 hypothetical protein -
RG36_RS27385 () 172824..173270 - 447 Protein_188 Sel1-repeat-containing protein YbeT VF

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance